RNA–Protein interactions for RNA: ENST00000563448.1

SMG1-208, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,016 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-208ENST00000563448 CHID1Q9BWS9 393 aa9.41□□□□□ -0.9
SMG1-208ENST00000563448 NRSN2Q9GZP1 204 aa9.41□□□□□ -0.9
SMG1-208ENST00000563448 WWTR1Q9GZV5 400 aa9.41□□□□□ -0.9
SMG1-208ENST00000563448 Q9N2J8 555 aa9.41□□□□□ -0.9
SMG1-208ENST00000563448 CBLCQ9ULV8 474 aa9.41□□□□□ -0.9
SMG1-208ENST00000563448 WDR45Q9Y484 360 aa9.41□□□□□ -0.9
SMG1-208ENST00000563448 CPAMD8Q8IZJ3 1885 aa9.4□□□□□ -0.9
SMG1-208ENST00000563448 NPIPA5A0A0B4J1W7 369 aa9.4□□□□□ -0.9
SMG1-208ENST00000563448 A0A1W2PQ72 361 aa9.4□□□□□ -0.9
SMG1-208ENST00000563448 PRAMEF25A6NGN4 478 aa9.4□□□□□ -0.9
SMG1-208ENST00000563448 FRG2CA6NGY1 282 aa9.4□□□□□ -0.9
SMG1-208ENST00000563448 NPIPA7E9PJI5 369 aa9.4□□□□□ -0.9
SMG1-208ENST00000563448 HNRNPRO43390 633 aaKnown RBP9.4□□□□□ -0.9
SMG1-208ENST00000563448 TPST1O60507 370 aa9.4□□□□□ -0.9
SMG1-208ENST00000563448 STX11O75558 287 aa9.4□□□□□ -0.9
SMG1-208ENST00000563448 SERPINB7O75635 380 aa9.4□□□□□ -0.9
SMG1-208ENST00000563448 IFNA14P01570 189 aa9.4□□□□□ -0.9
SMG1-208ENST00000563448 PABPC4LP0CB38 370 aaKnown RBP9.4□□□□□ -0.9
SMG1-208ENST00000563448 NPIPA8P0DM63 369 aa9.4□□□□□ -0.9
SMG1-208ENST00000563448 TNFRSF1BP20333 461 aa9.4□□□□□ -0.9
SMG1-208ENST00000563448 PIGAP37287 484 aa9.4□□□□□ -0.9
SMG1-208ENST00000563448 PLA2G5P39877 138 aa9.4□□□□□ -0.9
SMG1-208ENST00000563448 KCNJ5P48544 419 aa9.4□□□□□ -0.9
SMG1-208ENST00000563448 DCAF7P61962 342 aa9.4□□□□□ -0.9
SMG1-208ENST00000563448 GPR68Q15743 365 aa9.4□□□□□ -0.9
SMG1-208ENST00000563448 SNCBQ16143 134 aa9.4□□□□□ -0.9
SMG1-208ENST00000563448 CYP27C1Q4G0S4 372 aa9.4□□□□□ -0.9
SMG1-208ENST00000563448 AP1ARQ63HQ0 302 aa9.4□□□□□ -0.9
SMG1-208ENST00000563448 SLC29A4Q7RTT9 530 aa9.4□□□□□ -0.9
SMG1-208ENST00000563448 ARMC8Q8IUR7 673 aa9.4□□□□□ -0.9
SMG1-208ENST00000563448 ZNF619Q8N2I2 560 aa9.4□□□□□ -0.9
SMG1-208ENST00000563448 PQLC1Q8N2U9 271 aa9.4□□□□□ -0.9
SMG1-208ENST00000563448 BCORP1Q8N888 145 aa9.4□□□□□ -0.9
SMG1-208ENST00000563448 TMEM102Q8N9M5 508 aaPredicted RBP9.4□□□□□ -0.9
SMG1-208ENST00000563448 GPR32P1Q8NGA4 272 aa9.4□□□□□ -0.9
SMG1-208ENST00000563448 OR11G2Q8NGC1 345 aa9.4□□□□□ -0.9
SMG1-208ENST00000563448 IMMP1LQ96LU5 166 aa9.4□□□□□ -0.9
SMG1-208ENST00000563448 EFHD1Q9BUP0 239 aa9.4□□□□□ -0.9
SMG1-208ENST00000563448 GPR87Q9BY21 358 aa9.4□□□□□ -0.9
SMG1-208ENST00000563448 LIN28AQ9H9Z2 209 aaKnown RBP9.4□□□□□ -0.9
SMG1-208ENST00000563448 SEC14L3Q9UDX4 400 aa9.4□□□□□ -0.9
SMG1-208ENST00000563448 KCNE5Q9UJ90 142 aa9.4□□□□□ -0.9
SMG1-208ENST00000563448 RIMS3Q9UJD0 308 aa9.4□□□□□ -0.9
SMG1-208ENST00000563448 ANGPTL2Q9UKU9 493 aa9.4□□□□□ -0.9
SMG1-208ENST00000563448 MRPS18BQ9Y676 258 aaKnown RBP9.4□□□□□ -0.9
SMG1-208ENST00000563448 AHCTF1Q8WYP5 2266 aa9.4□□□□□ -0.91
SMG1-208ENST00000563448 CENPVL1A0A0U1RR11 272 aa9.39□□□□□ -0.91
SMG1-208ENST00000563448 CDC14CA4D256 554 aa9.39□□□□□ -0.91
SMG1-208ENST00000563448 DXOO77932 396 aaKnown RBP9.39□□□□□ -0.91
SMG1-208ENST00000563448 EPPINO95925 133 aa9.39□□□□□ -0.91
SMG1-208ENST00000563448 ALPPP05187 535 aa9.39□□□□□ -0.91
SMG1-208ENST00000563448 FESP07332 822 aa9.39□□□□□ -0.91
SMG1-208ENST00000563448 GUSBP08236 651 aa9.39□□□□□ -0.91
SMG1-208ENST00000563448 OTX2P32243 289 aa9.39□□□□□ -0.91
SMG1-208ENST00000563448 MAGEA2P43356 314 aa9.39□□□□□ -0.91
SMG1-208ENST00000563448 RFX3P48380 749 aa9.39□□□□□ -0.91
SMG1-208ENST00000563448 NR0B1P51843 470 aaKnown RBP9.39□□□□□ -0.91
SMG1-208ENST00000563448 SESN3P58005 492 aa9.39□□□□□ -0.91
SMG1-208ENST00000563448 IL10RAQ13651 578 aa9.39□□□□□ -0.91
SMG1-208ENST00000563448 MAPK14Q16539 360 aa9.39□□□□□ -0.91
SMG1-208ENST00000563448 HLA-DQA1Q5Y7H0 255 aa9.39□□□□□ -0.91
SMG1-208ENST00000563448 HSDL2Q6YN16 418 aa9.39□□□□□ -0.91
SMG1-208ENST00000563448 FKBP9P1Q75LS8 142 aa9.39□□□□□ -0.91
SMG1-208ENST00000563448 ERMP1Q7Z2K6 904 aa9.39□□□□□ -0.91
SMG1-208ENST00000563448 TSEN54Q7Z6J9 526 aaKnown RBP9.39□□□□□ -0.91
SMG1-208ENST00000563448 COMTD1Q86VU5 262 aa9.39□□□□□ -0.91
SMG1-208ENST00000563448 VRK2Q86Y07 508 aa9.39□□□□□ -0.91
SMG1-208ENST00000563448 KRT73Q86Y46 540 aa9.39□□□□□ -0.91
SMG1-208ENST00000563448 ELP5Q8TE02 316 aa9.39□□□□□ -0.91
SMG1-208ENST00000563448 LZICQ8WZA0 190 aa9.39□□□□□ -0.91
SMG1-208ENST00000563448 SPATA5L1Q9BVQ7 753 aa9.39□□□□□ -0.91
SMG1-208ENST00000563448 MTHFD2LQ9H903 347 aaPredicted RBP9.39□□□□□ -0.91
SMG1-208ENST00000563448 POLE3Q9NRF9 147 aa9.39□□□□□ -0.91
SMG1-208ENST00000563448 OR10H1Q9Y4A9 318 aa9.39□□□□□ -0.91
SMG1-208ENST00000563448 CHST2Q9Y4C5 530 aa9.39□□□□□ -0.91
SMG1-208ENST00000563448 TRBV11-1A0A0K0K1C0 115 aa9.39□□□□□ -0.91
SMG1-208ENST00000563448 TMEM200CA6NKL6 621 aa9.39□□□□□ -0.91
SMG1-208ENST00000563448 PEX12O00623 359 aa9.39□□□□□ -0.91
SMG1-208ENST00000563448 TO15178 435 aa9.39□□□□□ -0.91
SMG1-208ENST00000563448 KIAA0513O60268 411 aa9.39□□□□□ -0.91
SMG1-208ENST00000563448 UGT2B17O75795 530 aa9.39□□□□□ -0.91
SMG1-208ENST00000563448 CELA2AP08217 269 aa9.39□□□□□ -0.91
SMG1-208ENST00000563448 SDHBP21912 280 aa9.39□□□□□ -0.91
SMG1-208ENST00000563448 RPS4Y1P22090 263 aaKnown RBP9.39□□□□□ -0.91
SMG1-208ENST00000563448 OR1E2P47887 323 aa9.39□□□□□ -0.91
SMG1-208ENST00000563448 VLDLRP98155 873 aa9.39□□□□□ -0.91
SMG1-208ENST00000563448 PUM1Q14671 1186 aaKnown RBP eCLIP9.39□□□□□ -0.91
SMG1-208ENST00000563448 RTP5Q14D33 572 aa9.39□□□□□ -0.91
SMG1-208ENST00000563448 TGIF1Q15583 401 aa9.39□□□□□ -0.91
SMG1-208ENST00000563448 BTBD16Q32M84 506 aa9.39□□□□□ -0.91
SMG1-208ENST00000563448 IQCCQ4KMZ1 466 aa9.39□□□□□ -0.91
SMG1-208ENST00000563448 IFI44LQ53G44 452 aa9.39□□□□□ -0.91
SMG1-208ENST00000563448 ZNF311Q5JNZ3 666 aa9.39□□□□□ -0.91
SMG1-208ENST00000563448 NDUFAF7Q7L592 441 aa9.39□□□□□ -0.91
SMG1-208ENST00000563448 AMIGO2Q86SJ2 522 aa9.39□□□□□ -0.91
SMG1-208ENST00000563448 ZDHHC21Q8IVQ6 265 aa9.39□□□□□ -0.91
SMG1-208ENST00000563448 PRR22Q8IZ63 422 aa9.39□□□□□ -0.91
SMG1-208ENST00000563448 C17orf47Q8NEP4 570 aa9.39□□□□□ -0.91
SMG1-208ENST00000563448 OR8K3Q8NH51 312 aa9.39□□□□□ -0.91
SMG1-208ENST00000563448 OR52P1PQ8NH57 321 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms