RNA–Protein interactions for RNA: ENST00000562702.2

HDGFL3-202, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 449 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-202ENST00000562702 ATP6V1B1P15313 513 aa2.24□□□□□ -2.05
HDGFL3-202ENST00000562702 FASP25445 335 aa2.24□□□□□ -2.05
HDGFL3-202ENST00000562702 UCP1P25874 307 aa2.24□□□□□ -2.05
HDGFL3-202ENST00000562702 OAS2P29728 719 aaKnown RBP2.24□□□□□ -2.05
HDGFL3-202ENST00000562702 CHRNA3P32297 505 aa2.24□□□□□ -2.05
HDGFL3-202ENST00000562702 MDH2P40926 338 aaKnown RBP2.24□□□□□ -2.05
HDGFL3-202ENST00000562702 RGRP47804 291 aa2.24□□□□□ -2.05
HDGFL3-202ENST00000562702 MEOX2P50222 304 aa2.24□□□□□ -2.05
HDGFL3-202ENST00000562702 TKTL1P51854 596 aa2.24□□□□□ -2.05
HDGFL3-202ENST00000562702 NDPQ00604 133 aa2.24□□□□□ -2.05
HDGFL3-202ENST00000562702 PRKCEQ02156 737 aa2.24□□□□□ -2.05
HDGFL3-202ENST00000562702 MSLNQ13421 630 aaPredicted RBP2.24□□□□□ -2.05
HDGFL3-202ENST00000562702 KLF5Q13887 457 aaPredicted RBP2.24□□□□□ -2.05
HDGFL3-202ENST00000562702 GK2Q14410 553 aaPredicted RBP2.24□□□□□ -2.05
HDGFL3-202ENST00000562702 SLC10A1Q14973 349 aa2.24□□□□□ -2.05
HDGFL3-202ENST00000562702 MORF4L2Q15014 288 aa2.24□□□□□ -2.05
HDGFL3-202ENST00000562702 EXOSC7Q15024 291 aaKnown RBP2.24□□□□□ -2.05
HDGFL3-202ENST00000562702 AARDQ4LEZ3 155 aa2.24□□□□□ -2.05
HDGFL3-202ENST00000562702 TAF3Q5VWG9 929 aa2.24□□□□□ -2.05
HDGFL3-202ENST00000562702 TATDN1Q6P1N9 297 aa2.24□□□□□ -2.05
HDGFL3-202ENST00000562702 C2orf66Q6UXQ4 117 aa2.24□□□□□ -2.05
HDGFL3-202ENST00000562702 B3GLCTQ6Y288 498 aa2.24□□□□□ -2.05
HDGFL3-202ENST00000562702 GCNT7Q6ZNI0 430 aa2.24□□□□□ -2.05
HDGFL3-202ENST00000562702 STOX1Q6ZVD7 989 aa2.24□□□□□ -2.05
HDGFL3-202ENST00000562702 LUZP1Q86V48 1076 aa2.24□□□□□ -2.05
HDGFL3-202ENST00000562702 RELL2Q8NC24 303 aaPredicted RBP2.24□□□□□ -2.05
HDGFL3-202ENST00000562702 MSANTD4Q8NCY6 345 aa2.24□□□□□ -2.05
HDGFL3-202ENST00000562702 OR4A16Q8NH70 328 aa2.24□□□□□ -2.05
HDGFL3-202ENST00000562702 RSPH1Q8WYR4 309 aa2.24□□□□□ -2.05
HDGFL3-202ENST00000562702 BCL2L2Q92843 193 aaPredicted RBP2.24□□□□□ -2.05
HDGFL3-202ENST00000562702 CCDC47Q96A33 483 aaKnown RBP2.24□□□□□ -2.05
HDGFL3-202ENST00000562702 BIRC7Q96CA5 298 aa2.24□□□□□ -2.05
HDGFL3-202ENST00000562702 TSPAN18Q96SJ8 248 aa2.24□□□□□ -2.05
HDGFL3-202ENST00000562702 FAM173AQ9BQD7 235 aa2.24□□□□□ -2.05
HDGFL3-202ENST00000562702 DCTPP1Q9H773 170 aa2.24□□□□□ -2.05
HDGFL3-202ENST00000562702 ZCCHC3Q9NUD5 404 aaKnown RBP2.24□□□□□ -2.05
HDGFL3-202ENST00000562702 VNN3Q9NY84 501 aa2.24□□□□□ -2.05
HDGFL3-202ENST00000562702 VPS54Q9P1Q0 977 aa2.24□□□□□ -2.05
HDGFL3-202ENST00000562702 ERVK-18Q9QC07 812 aa2.24□□□□□ -2.05
HDGFL3-202ENST00000562702 EMCNQ9ULC0 261 aa2.24□□□□□ -2.05
HDGFL3-202ENST00000562702 MRPS2Q9Y399 296 aaKnown RBP2.24□□□□□ -2.05
HDGFL3-202ENST00000562702 TJP1Q07157 1748 aa2.24□□□□□ -2.05
HDGFL3-202ENST00000562702 TIAM2Q8IVF5 1701 aa2.24□□□□□ -2.05
HDGFL3-202ENST00000562702 FER1L6Q2WGJ9 1857 aa2.24□□□□□ -2.05
HDGFL3-202ENST00000562702 ANKRD36BQ8N2N9 1353 aa2.23□□□□□ -2.05
HDGFL3-202ENST00000562702 DLEC1Q9Y238 1755 aa2.23□□□□□ -2.05
HDGFL3-202ENST00000562702 MAP3K19Q56UN5 1328 aa2.23□□□□□ -2.05
HDGFL3-202ENST00000562702 EVC2Q86UK5 1308 aa2.23□□□□□ -2.05
HDGFL3-202ENST00000562702 TTC21AQ8NDW8 1320 aa2.23□□□□□ -2.05
HDGFL3-202ENST00000562702 KCPQ6ZWJ8 1503 aa2.23□□□□□ -2.05
HDGFL3-202ENST00000562702 TNRC6CQ9HCJ0 1690 aaKnown RBP2.23□□□□□ -2.05
HDGFL3-202ENST00000562702 PXDNLA1KZ92 1463 aa2.23□□□□□ -2.05
HDGFL3-202ENST00000562702 SMIM30A4D0T7 59 aa2.23□□□□□ -2.05
HDGFL3-202ENST00000562702 CCT8L1PA6NM43 557 aa2.23□□□□□ -2.05
HDGFL3-202ENST00000562702 SLC28A1O00337 649 aa2.23□□□□□ -2.05
HDGFL3-202ENST00000562702 EEF2KO00418 725 aaKnown RBP2.23□□□□□ -2.05
HDGFL3-202ENST00000562702 CYB561D2O14569 222 aa2.23□□□□□ -2.05
HDGFL3-202ENST00000562702 TNFSF11O14788 317 aa2.23□□□□□ -2.05
HDGFL3-202ENST00000562702 GPAA1O43292 621 aa2.23□□□□□ -2.05
HDGFL3-202ENST00000562702 GJB5O95377 273 aa2.23□□□□□ -2.05
HDGFL3-202ENST00000562702 FCARP24071 287 aa2.23□□□□□ -2.05
HDGFL3-202ENST00000562702 ACP1P24666 158 aa2.23□□□□□ -2.05
HDGFL3-202ENST00000562702 PRKAR2BP31323 418 aa2.23□□□□□ -2.05
HDGFL3-202ENST00000562702 ACADSBP45954 432 aa2.23□□□□□ -2.05
HDGFL3-202ENST00000562702 HNRNPA3P51991 378 aaKnown RBP2.23□□□□□ -2.05
HDGFL3-202ENST00000562702 ZNF131P52739 623 aa2.23□□□□□ -2.05
HDGFL3-202ENST00000562702 SMSP52788 366 aa2.23□□□□□ -2.05
HDGFL3-202ENST00000562702 NME5P56597 212 aa2.23□□□□□ -2.05
HDGFL3-202ENST00000562702 ERVPABLB-1P60509 514 aa2.23□□□□□ -2.05
HDGFL3-202ENST00000562702 HERV-K104P63124 156 aa2.23□□□□□ -2.05
HDGFL3-202ENST00000562702 CXCL6P80162 114 aa2.23□□□□□ -2.05
HDGFL3-202ENST00000562702 PAX2Q02962 417 aa2.23□□□□□ -2.05
HDGFL3-202ENST00000562702 HKDC1Q2TB90 917 aa2.23□□□□□ -2.05
HDGFL3-202ENST00000562702 GPAT3Q53EU6 434 aa2.23□□□□□ -2.05
HDGFL3-202ENST00000562702 TMEM270Q6UE05 265 aa2.23□□□□□ -2.05
HDGFL3-202ENST00000562702 MFSD7Q6UXD7 560 aa2.23□□□□□ -2.05
HDGFL3-202ENST00000562702 C10orf53Q8N6V4 93 aa2.23□□□□□ -2.05
HDGFL3-202ENST00000562702 PTP4A1Q93096 173 aa2.23□□□□□ -2.05
HDGFL3-202ENST00000562702 RAB39BQ96DA2 213 aa2.23□□□□□ -2.05
HDGFL3-202ENST00000562702 RAB3CQ96E17 227 aa2.23□□□□□ -2.05
HDGFL3-202ENST00000562702 MRPL53Q96EL3 112 aaKnown RBP2.23□□□□□ -2.05
HDGFL3-202ENST00000562702 OR5M11Q96RB7 305 aa2.23□□□□□ -2.05
HDGFL3-202ENST00000562702 CCT8L2Q96SF2 557 aa2.23□□□□□ -2.05
HDGFL3-202ENST00000562702 FAM213AQ9BRX8 229 aa2.23□□□□□ -2.05
HDGFL3-202ENST00000562702 DESI2Q9BSY9 194 aa2.23□□□□□ -2.05
HDGFL3-202ENST00000562702 GPR174Q9BXC1 333 aa2.23□□□□□ -2.05
HDGFL3-202ENST00000562702 MRPL9Q9BYD2 267 aaKnown RBP2.23□□□□□ -2.05
HDGFL3-202ENST00000562702 TRIM9Q9C026 710 aa2.23□□□□□ -2.05
HDGFL3-202ENST00000562702 TSPY26PQ9H489 355 aa2.23□□□□□ -2.05
HDGFL3-202ENST00000562702 ADGRL4Q9HBW9 690 aa2.23□□□□□ -2.05
HDGFL3-202ENST00000562702 Q9UF83 564 aa2.23□□□□□ -2.05
HDGFL3-202ENST00000562702 NARFQ9UHQ1 456 aa2.23□□□□□ -2.05
HDGFL3-202ENST00000562702 SNX5Q9Y5X3 404 aa2.23□□□□□ -2.05
HDGFL3-202ENST00000562702 A0A1W2PP64 1363 aa2.23□□□□□ -2.05
HDGFL3-202ENST00000562702 ANKRD26Q9UPS8 1709 aa2.22□□□□□ -2.05
HDGFL3-202ENST00000562702 GOLGB1Q14789 3259 aaKnown RBP2.22□□□□□ -2.05
HDGFL3-202ENST00000562702 KIF7Q2M1P5 1343 aa2.22□□□□□ -2.05
HDGFL3-202ENST00000562702 FAM205AQ6ZU69 1335 aa2.22□□□□□ -2.05
HDGFL3-202ENST00000562702 NPIPA5A0A0B4J1W7 369 aa2.22□□□□□ -2.05
HDGFL3-202ENST00000562702 NPIPA5E9PKD4 350 aa2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms