RNA–Protein interactions for RNA: ENST00000562668.1

SMG1-206, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 449 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-206ENST00000562668 RHBDF1Q96CC6 855 aa4.27□□□□□ -1.73
SMG1-206ENST00000562668 ZNF501Q96CX3 271 aaPredicted RBP4.27□□□□□ -1.73
SMG1-206ENST00000562668 MTBPQ96DY7 904 aa4.27□□□□□ -1.73
SMG1-206ENST00000562668 ZNF285Q96NJ3 590 aa4.27□□□□□ -1.73
SMG1-206ENST00000562668 ZIM3Q96PE6 472 aa4.27□□□□□ -1.73
SMG1-206ENST00000562668 CD180Q99467 661 aa4.27□□□□□ -1.73
SMG1-206ENST00000562668 RAB11FIP5Q9BXF6 653 aa4.27□□□□□ -1.73
SMG1-206ENST00000562668 APMAPQ9HDC9 416 aa4.27□□□□□ -1.73
SMG1-206ENST00000562668 THAP1Q9NVV9 213 aa4.27□□□□□ -1.73
SMG1-206ENST00000562668 UTP6Q9NYH9 597 aaKnown RBP4.27□□□□□ -1.73
SMG1-206ENST00000562668 TMEM216Q9P0N5 145 aa4.27□□□□□ -1.73
SMG1-206ENST00000562668 PSMC3IPQ9P2W1 217 aaPredicted RBP4.27□□□□□ -1.73
SMG1-206ENST00000562668 PTBP2Q9UKA9 531 aaKnown RBP4.27□□□□□ -1.73
SMG1-206ENST00000562668 SATB2Q9UPW6 733 aa4.27□□□□□ -1.73
SMG1-206ENST00000562668 KLHL20Q9Y2M5 609 aa4.27□□□□□ -1.73
SMG1-206ENST00000562668 ACOT9Q9Y305 439 aa4.27□□□□□ -1.73
SMG1-206ENST00000562668 LOXL2Q9Y4K0 774 aa4.27□□□□□ -1.73
SMG1-206ENST00000562668 FRYQ5TBA9 3013 aa4.27□□□□□ -1.73
SMG1-206ENST00000562668 CELSR3Q9NYQ7 3312 aa4.26□□□□□ -1.73
SMG1-206ENST00000562668 SAA2-SAA4A0A096LPE2 208 aa4.26□□□□□ -1.73
SMG1-206ENST00000562668 A0A0J9YY10 115 aa4.26□□□□□ -1.73
SMG1-206ENST00000562668 IQANK1A0A1B0GTG1 560 aa4.26□□□□□ -1.73
SMG1-206ENST00000562668 CCDC189A1A4V9 331 aa4.26□□□□□ -1.73
SMG1-206ENST00000562668 GSAPA4D1B5 854 aa4.26□□□□□ -1.73
SMG1-206ENST00000562668 OR6C68A6NDL8 312 aa4.26□□□□□ -1.73
SMG1-206ENST00000562668 A8MU76 341 aa4.26□□□□□ -1.73
SMG1-206ENST00000562668 G3V2L1 256 aa4.26□□□□□ -1.73
SMG1-206ENST00000562668 TMX2-CTNND1H3BSU7 103 aa4.26□□□□□ -1.73
SMG1-206ENST00000562668 UBXN8O00124 270 aa4.26□□□□□ -1.73
SMG1-206ENST00000562668 MAP2K7O14733 419 aa4.26□□□□□ -1.73
SMG1-206ENST00000562668 TIMM23O14925 209 aa4.26□□□□□ -1.73
SMG1-206ENST00000562668 ZW10O43264 779 aa4.26□□□□□ -1.73
SMG1-206ENST00000562668 CTSVO60911 334 aa4.26□□□□□ -1.73
SMG1-206ENST00000562668 CDH16O75309 829 aa4.26□□□□□ -1.73
SMG1-206ENST00000562668 KRT38O76015 456 aa4.26□□□□□ -1.73
SMG1-206ENST00000562668 CBX6O95503 412 aa4.26□□□□□ -1.73
SMG1-206ENST00000562668 TBX6O95947 436 aaPredicted RBP4.26□□□□□ -1.73
SMG1-206ENST00000562668 FGF5P12034 268 aa4.26□□□□□ -1.73
SMG1-206ENST00000562668 CYP2A7P20853 494 aa4.26□□□□□ -1.73
SMG1-206ENST00000562668 MAGP20916 626 aa4.26□□□□□ -1.73
SMG1-206ENST00000562668 OAS2P29728 719 aaKnown RBP4.26□□□□□ -1.73
SMG1-206ENST00000562668 HSD17B2P37059 387 aa4.26□□□□□ -1.73
SMG1-206ENST00000562668 SLCO1A2P46721 670 aa4.26□□□□□ -1.73
SMG1-206ENST00000562668 HILS1P60008 231 aa4.26□□□□□ -1.73
SMG1-206ENST00000562668 RELAQ04206 551 aa4.26□□□□□ -1.73
SMG1-206ENST00000562668 PRDX1Q06830 199 aaKnown RBP4.26□□□□□ -1.73
SMG1-206ENST00000562668 EIF3IQ13347 325 aaKnown RBP4.26□□□□□ -1.73
SMG1-206ENST00000562668 KRT33BQ14525 404 aa4.26□□□□□ -1.73
SMG1-206ENST00000562668 FBXO48Q5FWF7 155 aa4.26□□□□□ -1.73
SMG1-206ENST00000562668 FRMPD2BQ6IN97 320 aa4.26□□□□□ -1.73
SMG1-206ENST00000562668 IRGCQ6NXR0 463 aa4.26□□□□□ -1.73
SMG1-206ENST00000562668 KLHL35Q6PF15 583 aa4.26□□□□□ -1.73
SMG1-206ENST00000562668 LCTLQ6UWM7 567 aa4.26□□□□□ -1.73
SMG1-206ENST00000562668 MEX3BQ6ZN04 569 aaKnown RBP4.26□□□□□ -1.73
SMG1-206ENST00000562668 TIPARPQ7Z3E1 657 aaKnown RBP4.26□□□□□ -1.73
SMG1-206ENST00000562668 ADAMTSL2Q86TH1 951 aa4.26□□□□□ -1.73
SMG1-206ENST00000562668 KMT5CQ86Y97 462 aa4.26□□□□□ -1.73
SMG1-206ENST00000562668 BANPQ8N9N5 519 aa4.26□□□□□ -1.73
SMG1-206ENST00000562668 SLC38A9Q8NBW4 561 aa4.26□□□□□ -1.73
SMG1-206ENST00000562668 OR1L3Q8NH93 324 aa4.26□□□□□ -1.73
SMG1-206ENST00000562668 RFWD2Q8NHY2 731 aa4.26□□□□□ -1.73
SMG1-206ENST00000562668 STAG3L4Q8TBR4 150 aa4.26□□□□□ -1.73
SMG1-206ENST00000562668 STT3BQ8TCJ2 826 aa4.26□□□□□ -1.73
SMG1-206ENST00000562668 MAGEC3Q8TD91 643 aa4.26□□□□□ -1.73
SMG1-206ENST00000562668 MCOLN3Q8TDD5 553 aa4.26□□□□□ -1.73
SMG1-206ENST00000562668 ACMSDQ8TDX5 336 aa4.26□□□□□ -1.73
SMG1-206ENST00000562668 SKA2Q8WVK7 121 aaPredicted RBP4.26□□□□□ -1.73
SMG1-206ENST00000562668 SMPDL3AQ92484 453 aa4.26□□□□□ -1.73
SMG1-206ENST00000562668 ESAMQ96AP7 390 aa4.26□□□□□ -1.73
SMG1-206ENST00000562668 PYCR2Q96C36 320 aa4.26□□□□□ -1.73
SMG1-206ENST00000562668 WDR34Q96EX3 536 aa4.26□□□□□ -1.73
SMG1-206ENST00000562668 FOPNLQ96NB1 174 aa4.26□□□□□ -1.73
SMG1-206ENST00000562668 OR2A5Q96R48 311 aa4.26□□□□□ -1.73
SMG1-206ENST00000562668 DDA1Q9BW61 102 aa4.26□□□□□ -1.73
SMG1-206ENST00000562668 ROPN1BQ9BZX4 212 aaPredicted RBP4.26□□□□□ -1.73
SMG1-206ENST00000562668 WDR12Q9GZL7 423 aaKnown RBP4.26□□□□□ -1.73
SMG1-206ENST00000562668 AICDAQ9GZX7 198 aa4.26□□□□□ -1.73
SMG1-206ENST00000562668 ATG10Q9H0Y0 220 aa4.26□□□□□ -1.73
SMG1-206ENST00000562668 SPNS1Q9H2V7 528 aa4.26□□□□□ -1.73
SMG1-206ENST00000562668 CXorf56Q9H5V9 222 aa4.26□□□□□ -1.73
SMG1-206ENST00000562668 ALG9Q9H6U8 611 aa4.26□□□□□ -1.73
SMG1-206ENST00000562668 SYNDIG1Q9H7V2 258 aa4.26□□□□□ -1.73
SMG1-206ENST00000562668 POLR1BQ9H9Y6 1135 aa4.26□□□□□ -1.73
SMG1-206ENST00000562668 PPCSQ9HAB8 311 aa4.26□□□□□ -1.73
SMG1-206ENST00000562668 ROPN1Q9HAT0 212 aaPredicted RBP4.26□□□□□ -1.73
SMG1-206ENST00000562668 NMRAL1Q9HBL8 299 aa4.26□□□□□ -1.73
SMG1-206ENST00000562668 FBXO8Q9NRD0 319 aa4.26□□□□□ -1.73
SMG1-206ENST00000562668 NUDT4Q9NZJ9 180 aa4.26□□□□□ -1.73
SMG1-206ENST00000562668 LRFN1Q9P244 771 aa4.26□□□□□ -1.73
SMG1-206ENST00000562668 TXNDC16Q9P2K2 825 aa4.26□□□□□ -1.73
SMG1-206ENST00000562668 COPG2Q9UBF2 871 aa4.26□□□□□ -1.73
SMG1-206ENST00000562668 MALT1Q9UDY8 824 aa4.26□□□□□ -1.73
SMG1-206ENST00000562668 TBK1Q9UHD2 729 aa4.26□□□□□ -1.73
SMG1-206ENST00000562668 ANGPTL2Q9UKU9 493 aa4.26□□□□□ -1.73
SMG1-206ENST00000562668 CEP295Q9C0D2 2601 aa4.26□□□□□ -1.73
SMG1-206ENST00000562668 MDC1Q14676 2089 aaKnown RBP4.26□□□□□ -1.73
SMG1-206ENST00000562668 SPTBN2O15020 2390 aa4.26□□□□□ -1.73
SMG1-206ENST00000562668 FREM2Q5SZK8 3169 aa4.25□□□□□ -1.73
SMG1-206ENST00000562668 EFCAB7A8K855 629 aa4.25□□□□□ -1.73
SMG1-206ENST00000562668 A8MT66 165 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms