RNA–Protein interactions for RNA: ENST00000562310.1

COMMD4-205, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-205ENST00000562310 CYP27C1Q4G0S4 372 aa13.25□□□□□ -0.29
COMMD4-205ENST00000562310 IQCCQ4KMZ1 466 aa13.25□□□□□ -0.29
COMMD4-205ENST00000562310 LIN52Q52LA3 116 aa13.25□□□□□ -0.29
COMMD4-205ENST00000562310 SFT2D3Q587I9 215 aa13.25□□□□□ -0.29
COMMD4-205ENST00000562310 SHQ1Q6PI26 577 aaKnown RBP13.25□□□□□ -0.29
COMMD4-205ENST00000562310 TMEM205Q6UW68 189 aa13.25□□□□□ -0.29
COMMD4-205ENST00000562310 NPSR1Q6W5P4 371 aa13.25□□□□□ -0.29
COMMD4-205ENST00000562310 LANCL3Q6ZV70 420 aa13.25□□□□□ -0.29
COMMD4-205ENST00000562310 SLC29A4Q7RTT9 530 aa13.25□□□□□ -0.29
COMMD4-205ENST00000562310 CARM1Q86X55 608 aa13.25□□□□□ -0.29
COMMD4-205ENST00000562310 CBR4Q8N4T8 237 aa13.25□□□□□ -0.29
COMMD4-205ENST00000562310 C17orf47Q8NEP4 570 aa13.25□□□□□ -0.29
COMMD4-205ENST00000562310 DEFB124Q8NES8 71 aa13.25□□□□□ -0.29
COMMD4-205ENST00000562310 OR1N1Q8NGS0 311 aa13.25□□□□□ -0.29
COMMD4-205ENST00000562310 PIK3R3Q92569 461 aa13.25□□□□□ -0.29
COMMD4-205ENST00000562310 PMEPA1Q969W9 287 aa13.25□□□□□ -0.29
COMMD4-205ENST00000562310 EPYCQ99645 322 aa13.25□□□□□ -0.29
COMMD4-205ENST00000562310 PIP5K1AQ99755 562 aa13.25□□□□□ -0.29
COMMD4-205ENST00000562310 ITPAQ9BY32 194 aa13.25□□□□□ -0.29
COMMD4-205ENST00000562310 GABARAPL1Q9H0R8 117 aa13.25□□□□□ -0.29
COMMD4-205ENST00000562310 Q9H521 79 aa13.25□□□□□ -0.29
COMMD4-205ENST00000562310 ARMC7Q9H6L4 198 aa13.25□□□□□ -0.29
COMMD4-205ENST00000562310 MRTO4Q9UKD2 239 aaKnown RBP13.25□□□□□ -0.29
COMMD4-205ENST00000562310 PPIEQ9UNP9 301 aaKnown RBP13.25□□□□□ -0.29
COMMD4-205ENST00000562310 ZNF443Q9Y2A4 671 aaPredicted RBP13.25□□□□□ -0.29
COMMD4-205ENST00000562310 GPR55Q9Y2T6 319 aaPredicted RBP13.25□□□□□ -0.29
COMMD4-205ENST00000562310 SH3GLB1Q9Y371 365 aa13.25□□□□□ -0.29
COMMD4-205ENST00000562310 OR10H1Q9Y4A9 318 aa13.25□□□□□ -0.29
COMMD4-205ENST00000562310 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.24□□□□□ -0.29
COMMD4-205ENST00000562310 GXYLT2A0PJZ3 443 aa13.24□□□□□ -0.29
COMMD4-205ENST00000562310 G3V2T6 193 aa13.24□□□□□ -0.29
COMMD4-205ENST00000562310 ACOX3O15254 700 aa13.24□□□□□ -0.29
COMMD4-205ENST00000562310 CNOT3O75175 753 aaKnown RBP13.24□□□□□ -0.29
COMMD4-205ENST00000562310 ZIC2O95409 532 aaPredicted RBP13.24□□□□□ -0.29
COMMD4-205ENST00000562310 DLGAP3O95886 979 aa13.24□□□□□ -0.29
COMMD4-205ENST00000562310 LGI1O95970 557 aa13.24□□□□□ -0.29
COMMD4-205ENST00000562310 IGHEP01854 428 aa13.24□□□□□ -0.29
COMMD4-205ENST00000562310 FTH1P19P0C7X4 201 aa13.24□□□□□ -0.29
COMMD4-205ENST00000562310 CT45A8P0DMV1 189 aa13.24□□□□□ -0.29
COMMD4-205ENST00000562310 CT45A9P0DMV2 189 aa13.24□□□□□ -0.29
COMMD4-205ENST00000562310 DRD5P21918 477 aa13.24□□□□□ -0.29
COMMD4-205ENST00000562310 LCN1P31025 176 aa13.24□□□□□ -0.29
COMMD4-205ENST00000562310 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.24□□□□□ -0.29
COMMD4-205ENST00000562310 CT45A2Q5DJT8 189 aa13.24□□□□□ -0.29
COMMD4-205ENST00000562310 CCNJQ5T5M9 372 aa13.24□□□□□ -0.29
COMMD4-205ENST00000562310 RNF220Q5VTB9 566 aa13.24□□□□□ -0.29
COMMD4-205ENST00000562310 HLA-DQA1Q5Y7H0 255 aa13.24□□□□□ -0.29
COMMD4-205ENST00000562310 C6orf15Q6UXA7 325 aaPredicted RBP13.24□□□□□ -0.29
COMMD4-205ENST00000562310 SHISA6Q6ZSJ9 500 aa13.24□□□□□ -0.29
COMMD4-205ENST00000562310 CPEB2Q7Z5Q1 589 aaKnown RBP13.24□□□□□ -0.29
COMMD4-205ENST00000562310 GALNT6Q8NCL4 622 aa13.24□□□□□ -0.29
COMMD4-205ENST00000562310 B3GNT7Q8NFL0 401 aa13.24□□□□□ -0.29
COMMD4-205ENST00000562310 RNF31Q96EP0 1072 aa13.24□□□□□ -0.29
COMMD4-205ENST00000562310 ZNF597Q96LX8 424 aa13.24□□□□□ -0.29
COMMD4-205ENST00000562310 LPAR4Q99677 370 aa13.24□□□□□ -0.29
COMMD4-205ENST00000562310 NUDT9Q9BW91 350 aa13.24□□□□□ -0.29
COMMD4-205ENST00000562310 FAM117AQ9C073 453 aa13.24□□□□□ -0.29
COMMD4-205ENST00000562310 MKLN1Q9UL63 735 aa13.24□□□□□ -0.29
COMMD4-205ENST00000562310 CBLCQ9ULV8 474 aa13.24□□□□□ -0.29
COMMD4-205ENST00000562310 DTX4Q9Y2E6 619 aa13.24□□□□□ -0.29
COMMD4-205ENST00000562310 SAMHD1Q9Y3Z3 626 aaKnown RBP13.24□□□□□ -0.29
COMMD4-205ENST00000562310 PCDHGA10Q9Y5H3 936 aa13.24□□□□□ -0.29
COMMD4-205ENST00000562310 PCNX2A6NKB5 2137 aa13.24□□□□□ -0.29
COMMD4-205ENST00000562310 USP34Q70CQ2 3546 aa13.23□□□□□ -0.29
COMMD4-205ENST00000562310 C2orf92A0A1B0GVN3 265 aa13.23□□□□□ -0.29
COMMD4-205ENST00000562310 SOCS2O14508 198 aa13.23□□□□□ -0.29
COMMD4-205ENST00000562310 EI24O14681 340 aa13.23□□□□□ -0.29
COMMD4-205ENST00000562310 FCMRO60667 390 aa13.23□□□□□ -0.29
COMMD4-205ENST00000562310 RAB40ALP0C0E4 278 aa13.23□□□□□ -0.29
COMMD4-205ENST00000562310 CCNYL3P0C7X3 344 aa13.23□□□□□ -0.29
COMMD4-205ENST00000562310 NID1P14543 1247 aa13.23□□□□□ -0.29
COMMD4-205ENST00000562310 IL7RP16871 459 aa13.23□□□□□ -0.29
COMMD4-205ENST00000562310 TNFRSF1BP20333 461 aa13.23□□□□□ -0.29
COMMD4-205ENST00000562310 DCTP40126 519 aa13.23□□□□□ -0.29
COMMD4-205ENST00000562310 OR1E2P47887 323 aa13.23□□□□□ -0.29
COMMD4-205ENST00000562310 ALDH3A2P51648 485 aa13.23□□□□□ -0.29
COMMD4-205ENST00000562310 SMIM11AP58511 58 aa13.23□□□□□ -0.29
COMMD4-205ENST00000562310 SPIBQ01892 262 aa13.23□□□□□ -0.29
COMMD4-205ENST00000562310 DAG1Q14118 895 aa13.23□□□□□ -0.29
COMMD4-205ENST00000562310 PUM1Q14671 1186 aaKnown RBP eCLIP13.23□□□□□ -0.29
COMMD4-205ENST00000562310 EBPQ15125 230 aaKnown RBP13.23□□□□□ -0.29
COMMD4-205ENST00000562310 GPR68Q15743 365 aa13.23□□□□□ -0.29
COMMD4-205ENST00000562310 NRF1Q16656 503 aa13.23□□□□□ -0.29
COMMD4-205ENST00000562310 DECR1Q16698 335 aa13.23□□□□□ -0.29
COMMD4-205ENST00000562310 FLYWCH1Q4VC44 716 aa13.23□□□□□ -0.29
COMMD4-205ENST00000562310 FAAH2Q6GMR7 532 aa13.23□□□□□ -0.29
COMMD4-205ENST00000562310 LCN10Q6JVE6 187 aa13.23□□□□□ -0.29
COMMD4-205ENST00000562310 FIGNL1Q6PIW4 674 aa13.23□□□□□ -0.29
COMMD4-205ENST00000562310 PAPD4Q6PIY7 484 aaKnown RBP13.23□□□□□ -0.29
COMMD4-205ENST00000562310 OLIG3Q7RTU3 272 aa13.23□□□□□ -0.29
COMMD4-205ENST00000562310 STK32CQ86UX6 486 aa13.23□□□□□ -0.29
COMMD4-205ENST00000562310 GALNT4Q8N4A0 578 aa13.23□□□□□ -0.29
COMMD4-205ENST00000562310 OR2Y1Q8NGV0 311 aa13.23□□□□□ -0.29
COMMD4-205ENST00000562310 VMP1Q96GC9 406 aa13.23□□□□□ -0.29
COMMD4-205ENST00000562310 LCORQ96JN0 433 aaPredicted RBP13.23□□□□□ -0.29
COMMD4-205ENST00000562310 RDH12Q96NR8 316 aa13.23□□□□□ -0.29
COMMD4-205ENST00000562310 ARHGDIGQ99819 225 aa13.23□□□□□ -0.29
COMMD4-205ENST00000562310 RBM4BQ9BQ04 359 aaKnown RBP13.23□□□□□ -0.29
COMMD4-205ENST00000562310 RBM4Q9BWF3 364 aaKnown RBP13.23□□□□□ -0.29
COMMD4-205ENST00000562310 OSBPL11Q9BXB4 747 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms