RNA–Protein interactions for RNA: ENST00000561896.1

MSLN-203, Transcript of mesothelin, humanhuman

TSL 5

Gene MSLN, Length 1,195 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-203ENST00000561896 TSSK3Q96PN8 268 aa23.13■■□□□ 1.29
MSLN-203ENST00000561896 TAS2R10Q9NYW0 307 aa23.13■■□□□ 1.29
MSLN-203ENST00000561896 MBD3L4A6NDZ8 208 aaPredicted RBP23.12■■□□□ 1.29
MSLN-203ENST00000561896 MBD3L3A6NE82 208 aaPredicted RBP23.12■■□□□ 1.29
MSLN-203ENST00000561896 MBD3L5A6NJ08 208 aaPredicted RBP23.12■■□□□ 1.29
MSLN-203ENST00000561896 TMEM114B3SHH9 223 aa23.12■■□□□ 1.29
MSLN-203ENST00000561896 TMEM233B4DJY2 109 aa23.12■■□□□ 1.29
MSLN-203ENST00000561896 PIP5K1BO14986 540 aa23.12■■□□□ 1.29
MSLN-203ENST00000561896 IL33O95760 270 aa23.12■■□□□ 1.29
MSLN-203ENST00000561896 CYP4B1P13584 511 aa23.12■■□□□ 1.29
MSLN-203ENST00000561896 MAPK1P28482 360 aa23.12■■□□□ 1.29
MSLN-203ENST00000561896 RCAN2Q14206 197 aa23.12■■□□□ 1.29
MSLN-203ENST00000561896 SH2D4BQ5SQS7 431 aa23.12■■□□□ 1.29
MSLN-203ENST00000561896 AAGABQ6PD74 315 aa23.12■■□□□ 1.29
MSLN-203ENST00000561896 ZNF551Q7Z340 670 aaPredicted RBP23.12■■□□□ 1.29
MSLN-203ENST00000561896 IFNEQ86WN2 208 aa23.12■■□□□ 1.29
MSLN-203ENST00000561896 TNIP2Q8NFZ5 429 aa23.12■■□□□ 1.29
MSLN-203ENST00000561896 CEP70Q8NHQ1 597 aa23.12■■□□□ 1.29
MSLN-203ENST00000561896 MBD3L2Q8NHZ7 208 aaPredicted RBP23.12■■□□□ 1.29
MSLN-203ENST00000561896 UCN2Q96RP3 112 aa23.12■■□□□ 1.29
MSLN-203ENST00000561896 SDHAF3Q9NRP4 125 aa23.12■■□□□ 1.29
MSLN-203ENST00000561896 FAM120CQ9NX05 1096 aaKnown RBP23.12■■□□□ 1.29
MSLN-203ENST00000561896 FBXL2Q9UKC9 423 aa23.12■■□□□ 1.29
MSLN-203ENST00000561896 SPG11Q96JI7 2443 aa23.12■■□□□ 1.29
MSLN-203ENST00000561896 FADS1O60427 444 aa23.11■■□□□ 1.29
MSLN-203ENST00000561896 PRPS2P11908 318 aa23.11■■□□□ 1.29
MSLN-203ENST00000561896 BCKDHAP12694 445 aa23.11■■□□□ 1.29
MSLN-203ENST00000561896 CREB1P16220 341 aa23.11■■□□□ 1.29
MSLN-203ENST00000561896 CHMP24386 653 aa23.11■■□□□ 1.29
MSLN-203ENST00000561896 GPC1P35052 558 aa23.11■■□□□ 1.29
MSLN-203ENST00000561896 RPL3P39023 403 aaKnown RBP23.11■■□□□ 1.29
MSLN-203ENST00000561896 MAP3K8P41279 467 aa23.11■■□□□ 1.29
MSLN-203ENST00000561896 HSPB3Q12988 150 aa23.11■■□□□ 1.29
MSLN-203ENST00000561896 MLC1Q15049 377 aa23.11■■□□□ 1.29
MSLN-203ENST00000561896 GALNTL6Q49A17 601 aa23.11■■□□□ 1.29
MSLN-203ENST00000561896 VPS26BQ4G0F5 336 aa23.11■■□□□ 1.29
MSLN-203ENST00000561896 WDR53Q7Z5U6 358 aaPredicted RBP23.11■■□□□ 1.29
MSLN-203ENST00000561896 TRIM42Q8IWZ5 723 aa23.11■■□□□ 1.29
MSLN-203ENST00000561896 NAXEQ8NCW5 288 aa23.11■■□□□ 1.29
MSLN-203ENST00000561896 CIDECQ96AQ7 238 aaPredicted RBP23.11■■□□□ 1.29
MSLN-203ENST00000561896 PARD6BQ9BYG5 372 aa23.11■■□□□ 1.29
MSLN-203ENST00000561896 SSU72Q9NP77 194 aaKnown RBP23.11■■□□□ 1.29
MSLN-203ENST00000561896 SH3BP4Q9P0V3 963 aa23.11■■□□□ 1.29
MSLN-203ENST00000561896 BAIAP2L1Q9UHR4 511 aa23.11■■□□□ 1.29
MSLN-203ENST00000561896 SYT5O00445 386 aa23.1■■□□□ 1.29
MSLN-203ENST00000561896 AKAP10O43572 662 aa23.1■■□□□ 1.29
MSLN-203ENST00000561896 MANFP55145 182 aaKnown RBP23.1■■□□□ 1.29
MSLN-203ENST00000561896 DSCR4P56555 118 aaPredicted RBP23.1■■□□□ 1.29
MSLN-203ENST00000561896 FBXL19-AS1Q494R0 122 aa23.1■■□□□ 1.29
MSLN-203ENST00000561896 ZNF385BQ569K4 471 aa23.1■■□□□ 1.29
MSLN-203ENST00000561896 ANKRD26P1Q6NSI1 321 aa23.1■■□□□ 1.29
MSLN-203ENST00000561896 ZCCHC23Q6ZST2 131 aa23.1■■□□□ 1.29
MSLN-203ENST00000561896 FADS6Q8N9I5 356 aa23.1■■□□□ 1.29
MSLN-203ENST00000561896 CDRT4Q8N9R6 151 aa23.1■■□□□ 1.29
MSLN-203ENST00000561896 LRRC46Q96FV0 321 aa23.1■■□□□ 1.29
MSLN-203ENST00000561896 PPP4R1LQ9P1A2 415 aa23.1■■□□□ 1.29
MSLN-203ENST00000561896 NOL12Q9UGY1 213 aaKnown RBP eCLIP23.1■■□□□ 1.29
MSLN-203ENST00000561896 ATP6V1HQ9UI12 483 aa23.1■■□□□ 1.29
MSLN-203ENST00000561896 RAB21Q9UL25 225 aa23.1■■□□□ 1.29
MSLN-203ENST00000561896 V9GYY5 206 aaPredicted RBP23.1■■□□□ 1.29
MSLN-203ENST00000561896 KIAA1549Q9HCM3 1950 aa23.1■■□□□ 1.29
MSLN-203ENST00000561896 ZIC3O60481 467 aa23.09■■□□□ 1.29
MSLN-203ENST00000561896 TUBBP07437 444 aa23.09■■□□□ 1.29
MSLN-203ENST00000561896 ARRB2P32121 409 aa23.09■■□□□ 1.29
MSLN-203ENST00000561896 CLK3P49761 638 aaKnown RBP23.09■■□□□ 1.29
MSLN-203ENST00000561896 ZNF844Q08AG5 666 aa23.09■■□□□ 1.29
MSLN-203ENST00000561896 GANABQ14697 944 aaKnown RBP23.09■■□□□ 1.29
MSLN-203ENST00000561896 KRT71Q3SY84 523 aa23.09■■□□□ 1.29
MSLN-203ENST00000561896 ZCCHC12Q6PEW1 402 aa23.09■■□□□ 1.29
MSLN-203ENST00000561896 POMZP3Q6PJE2 187 aa23.09■■□□□ 1.29
MSLN-203ENST00000561896 ADGRE4PQ86SQ3 457 aa23.09■■□□□ 1.29
MSLN-203ENST00000561896 ZFP3Q96NJ6 502 aa23.09■■□□□ 1.29
MSLN-203ENST00000561896 TRIB1Q96RU8 372 aa23.09■■□□□ 1.29
MSLN-203ENST00000561896 HHATLQ9HCP6 504 aa23.09■■□□□ 1.29
MSLN-203ENST00000561896 FOXD3Q9UJU5 478 aaPredicted RBP23.09■■□□□ 1.29
MSLN-203ENST00000561896 DKKL1Q9UK85 242 aa23.09■■□□□ 1.29
MSLN-203ENST00000561896 PCNX3Q9H6A9 2034 aa23.09■■□□□ 1.29
MSLN-203ENST00000561896 NUP214P35658 2090 aaPredicted RBP23.09■■□□□ 1.29
MSLN-203ENST00000561896 MED12LQ86YW9 2145 aa23.08■■□□□ 1.29
MSLN-203ENST00000561896 KDM4EB2RXH2 506 aaPredicted RBP23.08■■□□□ 1.29
MSLN-203ENST00000561896 RGS16O15492 202 aaPredicted RBP23.08■■□□□ 1.29
MSLN-203ENST00000561896 CTIFO43310 598 aaKnown RBP23.08■■□□□ 1.29
MSLN-203ENST00000561896 LYPLA1O75608 230 aaPredicted RBP23.08■■□□□ 1.29
MSLN-203ENST00000561896 NKX2-2O95096 273 aa23.08■■□□□ 1.29
MSLN-203ENST00000561896 KCNH1O95259 989 aa23.08■■□□□ 1.29
MSLN-203ENST00000561896 IL18BPO95998 194 aa23.08■■□□□ 1.29
MSLN-203ENST00000561896 BMP5P22003 454 aa23.08■■□□□ 1.29
MSLN-203ENST00000561896 DPP4P27487 766 aa23.08■■□□□ 1.29
MSLN-203ENST00000561896 GABRA3P34903 492 aa23.08■■□□□ 1.29
MSLN-203ENST00000561896 HPCAL1P37235 193 aa23.08■■□□□ 1.29
MSLN-203ENST00000561896 LHX2P50458 406 aa23.08■■□□□ 1.29
MSLN-203ENST00000561896 ASCL1P50553 236 aa23.08■■□□□ 1.29
MSLN-203ENST00000561896 ZNF136P52737 540 aa23.08■■□□□ 1.29
MSLN-203ENST00000561896 DLX5P56178 289 aa23.08■■□□□ 1.29
MSLN-203ENST00000561896 BCL2A1Q16548 175 aa23.08■■□□□ 1.29
MSLN-203ENST00000561896 ATP6AP1LQ52LC2 224 aa23.08■■□□□ 1.29
MSLN-203ENST00000561896 CES4AQ5XG92 561 aa23.08■■□□□ 1.29
MSLN-203ENST00000561896 OR5M10Q6IEU7 315 aa23.08■■□□□ 1.29
MSLN-203ENST00000561896 NATD1Q8N6N6 113 aa23.08■■□□□ 1.29
MSLN-203ENST00000561896 RELL2Q8NC24 303 aaPredicted RBP23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms