RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 TSTA3Q13630 321 aaPredicted RBP3.2□□□□□ -1.9
HERC1-215ENST00000561436 ADAMTSL4-AS1Q5T5F5 129 aa3.2□□□□□ -1.9
HERC1-215ENST00000561436 ARHGAP17Q68EM7 881 aa3.2□□□□□ -1.9
HERC1-215ENST00000561436 KRTAP5-11Q6L8G4 156 aa3.2□□□□□ -1.9
HERC1-215ENST00000561436 B3GLCTQ6Y288 498 aa3.2□□□□□ -1.9
HERC1-215ENST00000561436 C17orf107Q6ZR85 190 aa3.2□□□□□ -1.9
HERC1-215ENST00000561436 CENPQQ7L2Z9 268 aaPredicted RBP3.2□□□□□ -1.9
HERC1-215ENST00000561436 ASPGQ86U10 573 aa3.2□□□□□ -1.9
HERC1-215ENST00000561436 KLHDC8BQ8IXV7 354 aa3.2□□□□□ -1.9
HERC1-215ENST00000561436 EFCAB13Q8IY85 973 aa3.2□□□□□ -1.9
HERC1-215ENST00000561436 ADAD2Q8NCV1 583 aaKnown RBP3.2□□□□□ -1.9
HERC1-215ENST00000561436 STKLD1Q8NE28 680 aa3.2□□□□□ -1.9
HERC1-215ENST00000561436 TCEAL3Q969E4 200 aa3.2□□□□□ -1.9
HERC1-215ENST00000561436 C18orf25Q96B23 403 aaPredicted RBP3.2□□□□□ -1.9
HERC1-215ENST00000561436 BPIFA2Q96DR5 249 aa3.2□□□□□ -1.9
HERC1-215ENST00000561436 ZNF486Q96H40 463 aaPredicted RBP3.2□□□□□ -1.9
HERC1-215ENST00000561436 C2orf48Q96LS8 159 aa3.2□□□□□ -1.9
HERC1-215ENST00000561436 TCEANC2Q96MN5 208 aa3.2□□□□□ -1.9
HERC1-215ENST00000561436 GABRG3Q99928 467 aa3.2□□□□□ -1.9
HERC1-215ENST00000561436 DDX50Q9BQ39 737 aaKnown RBP3.2□□□□□ -1.9
HERC1-215ENST00000561436 LLPHQ9BRT6 129 aaKnown RBP3.2□□□□□ -1.9
HERC1-215ENST00000561436 TRIM51Q9BSJ1 452 aa3.2□□□□□ -1.9
HERC1-215ENST00000561436 PRORYQ9H606 182 aa3.2□□□□□ -1.9
HERC1-215ENST00000561436 ZNF696Q9H7X3 374 aa3.2□□□□□ -1.9
HERC1-215ENST00000561436 S100A14Q9HCY8 104 aa3.2□□□□□ -1.9
HERC1-215ENST00000561436 B3GAT2Q9NPZ5 323 aa3.2□□□□□ -1.9
HERC1-215ENST00000561436 PNPLA3Q9NST1 481 aa3.2□□□□□ -1.9
HERC1-215ENST00000561436 ZCCHC3Q9NUD5 404 aaKnown RBP3.2□□□□□ -1.9
HERC1-215ENST00000561436 PLCXD1Q9NUJ7 323 aa3.2□□□□□ -1.9
HERC1-215ENST00000561436 DNAJC11Q9NVH1 559 aa3.2□□□□□ -1.9
HERC1-215ENST00000561436 GDAP2Q9NXN4 497 aa3.2□□□□□ -1.9
HERC1-215ENST00000561436 AKAP7Q9P0M2 348 aaPredicted RBP3.2□□□□□ -1.9
HERC1-215ENST00000561436 ZNF319Q9P2F9 582 aa3.2□□□□□ -1.9
HERC1-215ENST00000561436 ERRFI1Q9UJM3 462 aaPredicted RBP3.2□□□□□ -1.9
HERC1-215ENST00000561436 TDRKHQ9Y2W6 561 aaKnown RBP3.2□□□□□ -1.9
HERC1-215ENST00000561436 CSNK1G3Q9Y6M4 447 aa3.2□□□□□ -1.9
HERC1-215ENST00000561436 LCTP09848 1927 aa3.2□□□□□ -1.9
HERC1-215ENST00000561436 USP9XQ93008 2570 aaPredicted RBP3.2□□□□□ -1.9
HERC1-215ENST00000561436 GVINP1Q7Z2Y8 2422 aa3.2□□□□□ -1.9
HERC1-215ENST00000561436 SPTBN4Q9H254 2564 aa3.19□□□□□ -1.9
HERC1-215ENST00000561436 WDFY4Q6ZS81 3184 aa3.19□□□□□ -1.9
HERC1-215ENST00000561436 IGHV1OR15-9A0A0B4J2B8 117 aa3.19□□□□□ -1.9
HERC1-215ENST00000561436 TRBV2A0A0J9YWF9 115 aa3.19□□□□□ -1.9
HERC1-215ENST00000561436 ZNF840PA6NDX5 716 aa3.19□□□□□ -1.9
HERC1-215ENST00000561436 SYT7O43581 403 aa3.19□□□□□ -1.9
HERC1-215ENST00000561436 KRT86O43790 486 aa3.19□□□□□ -1.9
HERC1-215ENST00000561436 FAM189A1O60320 539 aa3.19□□□□□ -1.9
HERC1-215ENST00000561436 HUS1O60921 280 aa3.19□□□□□ -1.9
HERC1-215ENST00000561436 NME6O75414 186 aaPredicted RBP3.19□□□□□ -1.9
HERC1-215ENST00000561436 GMNNO75496 209 aa3.19□□□□□ -1.9
HERC1-215ENST00000561436 KLF8O95600 359 aaPredicted RBP3.19□□□□□ -1.9
HERC1-215ENST00000561436 OAS1P00973 400 aaKnown RBP3.19□□□□□ -1.9
HERC1-215ENST00000561436 MT-ND3P03897 115 aa3.19□□□□□ -1.9
HERC1-215ENST00000561436 RPLP0P05388 317 aaKnown RBP3.19□□□□□ -1.9
HERC1-215ENST00000561436 SFTPBP07988 381 aa3.19□□□□□ -1.9
HERC1-215ENST00000561436 CFC1BP0CG36 223 aa3.19□□□□□ -1.9
HERC1-215ENST00000561436 CFC1P0CG37 223 aa3.19□□□□□ -1.9
HERC1-215ENST00000561436 SFTPCP11686 197 aa3.19□□□□□ -1.9
HERC1-215ENST00000561436 ZNF26P17031 533 aaPredicted RBP3.19□□□□□ -1.9
HERC1-215ENST00000561436 BCKDHBP21953 392 aa3.19□□□□□ -1.9
HERC1-215ENST00000561436 PRKACGP22612 351 aa3.19□□□□□ -1.9
HERC1-215ENST00000561436 ACKR3P25106 362 aa3.19□□□□□ -1.9
HERC1-215ENST00000561436 GPR183P32249 361 aa3.19□□□□□ -1.9
HERC1-215ENST00000561436 NUDT1P36639 197 aa3.19□□□□□ -1.9
HERC1-215ENST00000561436 FEN1P39748 380 aaKnown RBP3.19□□□□□ -1.9
HERC1-215ENST00000561436 CCT6AP40227 531 aaKnown RBP3.19□□□□□ -1.9
HERC1-215ENST00000561436 MATKP42679 507 aa3.19□□□□□ -1.9
HERC1-215ENST00000561436 PTGER3P43115 390 aa3.19□□□□□ -1.9
HERC1-215ENST00000561436 ZNF131P52739 623 aa3.19□□□□□ -1.9
HERC1-215ENST00000561436 SMSP52788 366 aa3.19□□□□□ -1.9
HERC1-215ENST00000561436 ABCE1P61221 599 aaKnown RBP3.19□□□□□ -1.9
HERC1-215ENST00000561436 SNRPFP62306 86 aaKnown RBP3.19□□□□□ -1.9
HERC1-215ENST00000561436 HMGN5P82970 282 aaKnown RBP3.19□□□□□ -1.9
HERC1-215ENST00000561436 GTF2BQ00403 316 aa3.19□□□□□ -1.9
HERC1-215ENST00000561436 GALK2Q01415 458 aa3.19□□□□□ -1.9
HERC1-215ENST00000561436 DHODHQ02127 395 aa3.19□□□□□ -1.9
HERC1-215ENST00000561436 KRT81Q14533 505 aa3.19□□□□□ -1.9
HERC1-215ENST00000561436 RFTN2Q52LD8 501 aaPredicted RBP3.19□□□□□ -1.9
HERC1-215ENST00000561436 DDI2Q5TDH0 399 aa3.19□□□□□ -1.9
HERC1-215ENST00000561436 LYPLAL1Q5VWZ2 237 aa3.19□□□□□ -1.9
HERC1-215ENST00000561436 BHLHB9Q6PI77 547 aa3.19□□□□□ -1.9
HERC1-215ENST00000561436 LAX1Q8IWV1 398 aa3.19□□□□□ -1.9
HERC1-215ENST00000561436 DAW1Q8N136 415 aa3.19□□□□□ -1.9
HERC1-215ENST00000561436 SLC43A2Q8N370 569 aa3.19□□□□□ -1.9
HERC1-215ENST00000561436 RTL3Q8N8U3 475 aaKnown RBP3.19□□□□□ -1.9
HERC1-215ENST00000561436 ZNF557Q8N988 423 aaPredicted RBP3.19□□□□□ -1.9
HERC1-215ENST00000561436 NUP37Q8NFH4 326 aa3.19□□□□□ -1.9
HERC1-215ENST00000561436 OR10T2Q8NGX3 314 aa3.19□□□□□ -1.9
HERC1-215ENST00000561436 ART5Q96L15 291 aa3.19□□□□□ -1.9
HERC1-215ENST00000561436 XPO6Q96QU8 1125 aaKnown RBP3.19□□□□□ -1.9
HERC1-215ENST00000561436 PKMYT1Q99640 499 aa3.19□□□□□ -1.9
HERC1-215ENST00000561436 CCM2Q9BSQ5 444 aa3.19□□□□□ -1.9
HERC1-215ENST00000561436 NUP58Q9BVL2 599 aa3.19□□□□□ -1.9
HERC1-215ENST00000561436 ABCG8Q9H221 673 aa3.19□□□□□ -1.9
HERC1-215ENST00000561436 CXCL16Q9H2A7 254 aa3.19□□□□□ -1.9
HERC1-215ENST00000561436 SPHK2Q9NRA0 654 aa3.19□□□□□ -1.9
HERC1-215ENST00000561436 TEX10Q9NXF1 929 aaPredicted RBP3.19□□□□□ -1.9
HERC1-215ENST00000561436 NLGN3Q9NZ94 848 aa3.19□□□□□ -1.9
HERC1-215ENST00000561436 DEC1Q9P2X7 70 aa3.19□□□□□ -1.9
HERC1-215ENST00000561436 CDH9Q9ULB4 789 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms