RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 GLIPR2Q9H4G4 154 aa14.69□□□□□ -0.06
SNX1-213ENST00000561026 TNFRSF12AQ9NP84 129 aa14.69□□□□□ -0.06
SNX1-213ENST00000561026 RRAGDQ9NQL2 400 aaPredicted RBP14.69□□□□□ -0.06
SNX1-213ENST00000561026 POLR3HQ9Y535 204 aaPredicted RBP14.69□□□□□ -0.06
SNX1-213ENST00000561026 ZNF469Q96JG9 3925 aaPredicted RBP14.68□□□□□ -0.06
SNX1-213ENST00000561026 C17orf51A8MQB3 221 aa14.68□□□□□ -0.06
SNX1-213ENST00000561026 FADS1O60427 444 aa14.68□□□□□ -0.06
SNX1-213ENST00000561026 PLIN3O60664 434 aa14.68□□□□□ -0.06
SNX1-213ENST00000561026 CRCPO75575 148 aa14.68□□□□□ -0.06
SNX1-213ENST00000561026 CD99P14209 185 aa14.68□□□□□ -0.06
SNX1-213ENST00000561026 NTSP30990 170 aa14.68□□□□□ -0.06
SNX1-213ENST00000561026 CRHR1P34998 444 aa14.68□□□□□ -0.06
SNX1-213ENST00000561026 EEF1A1P68104 462 aaKnown RBP14.68□□□□□ -0.06
SNX1-213ENST00000561026 CCDC153Q494R4 210 aa14.68□□□□□ -0.06
SNX1-213ENST00000561026 CFAP157Q5JU67 520 aa14.68□□□□□ -0.06
SNX1-213ENST00000561026 SH2D4BQ5SQS7 431 aa14.68□□□□□ -0.06
SNX1-213ENST00000561026 EEF1A1P5Q5VTE0 462 aa14.68□□□□□ -0.06
SNX1-213ENST00000561026 FBXW10Q5XX13 1052 aa14.68□□□□□ -0.06
SNX1-213ENST00000561026 NOXRED1Q6NXP6 359 aa14.68□□□□□ -0.06
SNX1-213ENST00000561026 IKBIPQ70UQ0 350 aa14.68□□□□□ -0.06
SNX1-213ENST00000561026 LUZP2Q86TE4 346 aa14.68□□□□□ -0.06
SNX1-213ENST00000561026 TGIF2LYQ8IUE0 185 aa14.68□□□□□ -0.06
SNX1-213ENST00000561026 GRAMD2AQ8IUY3 354 aa14.68□□□□□ -0.06
SNX1-213ENST00000561026 GSPT2Q8IYD1 628 aaKnown RBP14.68□□□□□ -0.06
SNX1-213ENST00000561026 GCNT2Q8N0V5 402 aa14.68□□□□□ -0.06
SNX1-213ENST00000561026 FADS6Q8N9I5 356 aa14.68□□□□□ -0.06
SNX1-213ENST00000561026 ELP4Q96EB1 424 aa14.68□□□□□ -0.06
SNX1-213ENST00000561026 PIGMQ9H3S5 423 aa14.68□□□□□ -0.06
SNX1-213ENST00000561026 DDX18Q9NVP1 670 aaKnown RBP14.68□□□□□ -0.06
SNX1-213ENST00000561026 GALNT8Q9NY28 637 aa14.68□□□□□ -0.06
SNX1-213ENST00000561026 PPP4R1LQ9P1A2 415 aa14.68□□□□□ -0.06
SNX1-213ENST00000561026 CCL27Q9Y4X3 112 aa14.68□□□□□ -0.06
SNX1-213ENST00000561026 ACANP16112 2415 aa14.67□□□□□ -0.06
SNX1-213ENST00000561026 TNFSF12-TNFSF13A0A0A6YY99 330 aa14.67□□□□□ -0.06
SNX1-213ENST00000561026 HCRTR2O43614 444 aa14.67□□□□□ -0.06
SNX1-213ENST00000561026 SCO2O43819 266 aa14.67□□□□□ -0.06
SNX1-213ENST00000561026 TNFSF13O75888 250 aa14.67□□□□□ -0.06
SNX1-213ENST00000561026 GOSR1O95249 250 aa14.67□□□□□ -0.06
SNX1-213ENST00000561026 TGM6O95932 706 aa14.67□□□□□ -0.06
SNX1-213ENST00000561026 SHBGP04278 402 aa14.67□□□□□ -0.06
SNX1-213ENST00000561026 CPA3P15088 417 aa14.67□□□□□ -0.06
SNX1-213ENST00000561026 TCEA1P23193 301 aaKnown RBP14.67□□□□□ -0.06
SNX1-213ENST00000561026 CPA2P48052 419 aa14.67□□□□□ -0.06
SNX1-213ENST00000561026 KIAA0040Q15053 153 aa14.67□□□□□ -0.06
SNX1-213ENST00000561026 DECR1Q16698 335 aa14.67□□□□□ -0.06
SNX1-213ENST00000561026 CAMKMTQ7Z624 323 aa14.67□□□□□ -0.06
SNX1-213ENST00000561026 EIF1ADQ8N9N8 165 aaKnown RBP14.67□□□□□ -0.06
SNX1-213ENST00000561026 OR2M3Q8NG83 312 aa14.67□□□□□ -0.06
SNX1-213ENST00000561026 MBD6Q96DN6 1003 aa14.67□□□□□ -0.06
SNX1-213ENST00000561026 METTL2AQ96IZ6 378 aaKnown RBP14.67□□□□□ -0.06
SNX1-213ENST00000561026 DACH2Q96NX9 599 aa14.67□□□□□ -0.06
SNX1-213ENST00000561026 ALPK1Q96QP1 1244 aa14.67□□□□□ -0.06
SNX1-213ENST00000561026 RTN4RQ9BZR6 473 aa14.67□□□□□ -0.06
SNX1-213ENST00000561026 DSN1Q9H410 356 aa14.67□□□□□ -0.06
SNX1-213ENST00000561026 Q9N2J8 555 aa14.67□□□□□ -0.06
SNX1-213ENST00000561026 SDHAF3Q9NRP4 125 aa14.67□□□□□ -0.06
SNX1-213ENST00000561026 OXSMQ9NWU1 459 aa14.67□□□□□ -0.06
SNX1-213ENST00000561026 FLRT3Q9NZU0 649 aa14.67□□□□□ -0.06
SNX1-213ENST00000561026 PACSIN3Q9UKS6 424 aa14.67□□□□□ -0.06
SNX1-213ENST00000561026 ABCG2Q9UNQ0 655 aa14.67□□□□□ -0.06
SNX1-213ENST00000561026 A8MXE2 369 aa14.66□□□□□ -0.06
SNX1-213ENST00000561026 SEC22BO75396 215 aa14.66□□□□□ -0.06
SNX1-213ENST00000561026 IL33O95760 270 aa14.66□□□□□ -0.06
SNX1-213ENST00000561026 UROSP10746 265 aa14.66□□□□□ -0.06
SNX1-213ENST00000561026 ZNHIT3Q15649 155 aaPredicted RBP14.66□□□□□ -0.06
SNX1-213ENST00000561026 PAMR1Q6UXH9 720 aa14.66□□□□□ -0.06
SNX1-213ENST00000561026 CHMP1BQ7LBR1 199 aa14.66□□□□□ -0.06
SNX1-213ENST00000561026 TDRPQ86YL5 185 aa14.66□□□□□ -0.06
SNX1-213ENST00000561026 MED12LQ86YW9 2145 aa14.66□□□□□ -0.06
SNX1-213ENST00000561026 EGLN2Q96KS0 407 aa14.66□□□□□ -0.06
SNX1-213ENST00000561026 YIPF4Q9BSR8 244 aa14.66□□□□□ -0.06
SNX1-213ENST00000561026 LMF2Q9BU23 707 aaKnown RBP14.66□□□□□ -0.06
SNX1-213ENST00000561026 C12orf65Q9H3J6 166 aaKnown RBP14.66□□□□□ -0.06
SNX1-213ENST00000561026 PLEKHF2Q9H8W4 249 aa14.66□□□□□ -0.06
SNX1-213ENST00000561026 PPCSQ9HAB8 311 aa14.66□□□□□ -0.06
SNX1-213ENST00000561026 FAM120CQ9NX05 1096 aaKnown RBP14.66□□□□□ -0.06
SNX1-213ENST00000561026 MED11Q9P086 117 aa14.66□□□□□ -0.06
SNX1-213ENST00000561026 MRTO4Q9UKD2 239 aaKnown RBP14.66□□□□□ -0.06
SNX1-213ENST00000561026 A0A1W2PNV4 684 aa14.65□□□□□ -0.06
SNX1-213ENST00000561026 NPIPB8E9PQR5 432 aa14.65□□□□□ -0.06
SNX1-213ENST00000561026 CRHP06850 196 aa14.65□□□□□ -0.06
SNX1-213ENST00000561026 IFI6P09912 130 aa14.65□□□□□ -0.06
SNX1-213ENST00000561026 PEPDP12955 493 aa14.65□□□□□ -0.06
SNX1-213ENST00000561026 HK1P19367 917 aa14.65□□□□□ -0.06
SNX1-213ENST00000561026 KLK2P20151 261 aa14.65□□□□□ -0.06
SNX1-213ENST00000561026 PRPH2P23942 346 aa14.65□□□□□ -0.06
SNX1-213ENST00000561026 DIO3P55073 304 aa14.65□□□□□ -0.06
SNX1-213ENST00000561026 CLDN15P56746 228 aa14.65□□□□□ -0.06
SNX1-213ENST00000561026 GANABQ14697 944 aaKnown RBP14.65□□□□□ -0.06
SNX1-213ENST00000561026 CLEC6AQ6EIG7 209 aa14.65□□□□□ -0.06
SNX1-213ENST00000561026 UBQLNLQ8IYU4 475 aa14.65□□□□□ -0.06
SNX1-213ENST00000561026 CCDC63Q8NA47 563 aa14.65□□□□□ -0.06
SNX1-213ENST00000561026 DUSP19Q8WTR2 217 aa14.65□□□□□ -0.06
SNX1-213ENST00000561026 PTGES2Q9H7Z7 377 aa14.65□□□□□ -0.06
SNX1-213ENST00000561026 C1orf109Q9NX04 203 aa14.65□□□□□ -0.06
SNX1-213ENST00000561026 SH3D21A4FU49 640 aa14.64□□□□□ -0.07
SNX1-213ENST00000561026 SLC22A20A6NK97 555 aa14.64□□□□□ -0.07
SNX1-213ENST00000561026 TTC36A6NLP5 189 aa14.64□□□□□ -0.07
SNX1-213ENST00000561026 LINC01387J3KSC0 135 aa14.64□□□□□ -0.07
SNX1-213ENST00000561026 SLC28A1O00337 649 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms