RNA–Protein interactions for RNA: ENST00000560858.1

SPG11-223, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 447 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-223ENST00000560858 KRR1Q13601 381 aaKnown RBP2.32□□□□□ -2.04
SPG11-223ENST00000560858 DNASE1L3Q13609 305 aa2.32□□□□□ -2.04
SPG11-223ENST00000560858 PDE7AQ13946 482 aa2.32□□□□□ -2.04
SPG11-223ENST00000560858 KCNC3Q14003 757 aa2.32□□□□□ -2.04
SPG11-223ENST00000560858 DGCR6Q14129 220 aa2.32□□□□□ -2.04
SPG11-223ENST00000560858 SIM2Q14190 667 aaPredicted RBP2.32□□□□□ -2.04
SPG11-223ENST00000560858 MAPK11Q15759 364 aa2.32□□□□□ -2.04
SPG11-223ENST00000560858 CHRNA6Q15825 494 aa2.32□□□□□ -2.04
SPG11-223ENST00000560858 TIGD6Q17RP2 521 aa2.32□□□□□ -2.04
SPG11-223ENST00000560858 PTCHD3Q3KNS1 767 aa2.32□□□□□ -2.04
SPG11-223ENST00000560858 TIMM50Q3ZCQ8 353 aa2.32□□□□□ -2.04
SPG11-223ENST00000560858 PAGE2BQ5JRK9 111 aa2.32□□□□□ -2.04
SPG11-223ENST00000560858 PLEKHS1Q5SXH7 462 aa2.32□□□□□ -2.04
SPG11-223ENST00000560858 TPRG1LQ5T0D9 272 aa2.32□□□□□ -2.04
SPG11-223ENST00000560858 HECTD3Q5T447 861 aa2.32□□□□□ -2.04
SPG11-223ENST00000560858 C10orf62Q5T681 223 aaPredicted RBP2.32□□□□□ -2.04
SPG11-223ENST00000560858 ATAD3BQ5T9A4 648 aa2.32□□□□□ -2.04
SPG11-223ENST00000560858 AGAP6Q5VW22 663 aa2.32□□□□□ -2.04
SPG11-223ENST00000560858 RNLSQ5VYX0 342 aa2.32□□□□□ -2.04
SPG11-223ENST00000560858 MFSD14CQ5VZR4 134 aa2.32□□□□□ -2.04
SPG11-223ENST00000560858 LIPJQ5W064 366 aa2.32□□□□□ -2.04
SPG11-223ENST00000560858 FRG2Q64ET8 278 aa2.32□□□□□ -2.04
SPG11-223ENST00000560858 RGS7BPQ6MZT1 257 aaPredicted RBP2.32□□□□□ -2.04
SPG11-223ENST00000560858 NOXRED1Q6NXP6 359 aa2.32□□□□□ -2.04
SPG11-223ENST00000560858 DOK6Q6PKX4 331 aa2.32□□□□□ -2.04
SPG11-223ENST00000560858 FAM151BQ6UXP7 276 aa2.32□□□□□ -2.04
SPG11-223ENST00000560858 CCDC80Q76M96 950 aa2.32□□□□□ -2.04
SPG11-223ENST00000560858 TAS2R42Q7RTR8 314 aa2.32□□□□□ -2.04
SPG11-223ENST00000560858 VTCN1Q7Z7D3 282 aa2.32□□□□□ -2.04
SPG11-223ENST00000560858 GALNT5Q7Z7M9 940 aa2.32□□□□□ -2.04
SPG11-223ENST00000560858 AKAP14Q86UN6 197 aa2.32□□□□□ -2.04
SPG11-223ENST00000560858 ANKRD46Q86W74 232 aa2.32□□□□□ -2.04
SPG11-223ENST00000560858 DENND1CQ8IV53 801 aa2.32□□□□□ -2.04
SPG11-223ENST00000560858 MMAAQ8IVH4 418 aaKnown RBP2.32□□□□□ -2.04
SPG11-223ENST00000560858 P3H2Q8IVL5 708 aa2.32□□□□□ -2.04
SPG11-223ENST00000560858 SLC30A8Q8IWU4 369 aa2.32□□□□□ -2.04
SPG11-223ENST00000560858 LAS2Q8IYD9 372 aa2.32□□□□□ -2.04
SPG11-223ENST00000560858 SLC22A15Q8IZD6 547 aa2.32□□□□□ -2.04
SPG11-223ENST00000560858 FBXL14Q8N1E6 418 aa2.32□□□□□ -2.04
SPG11-223ENST00000560858 PARP16Q8N5Y8 322 aa2.32□□□□□ -2.04
SPG11-223ENST00000560858 IL17RCQ8NAC3 791 aa2.32□□□□□ -2.04
SPG11-223ENST00000560858 C11orf65Q8NCR3 313 aa2.32□□□□□ -2.04
SPG11-223ENST00000560858 GPR26Q8NDV2 337 aa2.32□□□□□ -2.04
SPG11-223ENST00000560858 DENND6BQ8NEG7 585 aa2.32□□□□□ -2.04
SPG11-223ENST00000560858 OR10G2Q8NGC3 310 aa2.32□□□□□ -2.04
SPG11-223ENST00000560858 PSMA8Q8TAA3 256 aa2.32□□□□□ -2.04
SPG11-223ENST00000560858 WFDC5Q8TCV5 224 aa2.32□□□□□ -2.04
SPG11-223ENST00000560858 ZNF675Q8TD23 568 aa2.32□□□□□ -2.04
SPG11-223ENST00000560858 APOBEC4Q8WW27 367 aaKnown RBP2.32□□□□□ -2.04
SPG11-223ENST00000560858 SELENOMQ8WWX9 145 aa2.32□□□□□ -2.04
SPG11-223ENST00000560858 GEMIN6Q8WXD5 167 aaKnown RBP2.32□□□□□ -2.04
SPG11-223ENST00000560858 PIK3R3Q92569 461 aa2.32□□□□□ -2.04
SPG11-223ENST00000560858 PROX1Q92786 737 aa2.32□□□□□ -2.04
SPG11-223ENST00000560858 MYDGFQ969H8 173 aa2.32□□□□□ -2.04
SPG11-223ENST00000560858 WBP2Q969T9 261 aa2.32□□□□□ -2.04
SPG11-223ENST00000560858 TMCO6Q96DC7 493 aa2.32□□□□□ -2.04
SPG11-223ENST00000560858 ZHX1-C8orf76Q96EF9 292 aa2.32□□□□□ -2.04
SPG11-223ENST00000560858 APIPQ96GX9 242 aa2.32□□□□□ -2.04
SPG11-223ENST00000560858 ZNF486Q96H40 463 aaPredicted RBP2.32□□□□□ -2.04
SPG11-223ENST00000560858 MED30Q96HR3 178 aa2.32□□□□□ -2.04
SPG11-223ENST00000560858 EGLN2Q96KS0 407 aa2.32□□□□□ -2.04
SPG11-223ENST00000560858 B3GALT6Q96L58 329 aa2.32□□□□□ -2.04
SPG11-223ENST00000560858 APOLD1Q96LR9 279 aa2.32□□□□□ -2.04
SPG11-223ENST00000560858 SLC46A1Q96NT5 459 aa2.32□□□□□ -2.04
SPG11-223ENST00000560858 COL21A1Q96P44 957 aa2.32□□□□□ -2.04
SPG11-223ENST00000560858 AGAP4Q96P64 663 aa2.32□□□□□ -2.04
SPG11-223ENST00000560858 CASD1Q96PB1 797 aa2.32□□□□□ -2.04
SPG11-223ENST00000560858 TSSK3Q96PN8 268 aa2.32□□□□□ -2.04
SPG11-223ENST00000560858 FRG2BQ96QU4 278 aa2.32□□□□□ -2.04
SPG11-223ENST00000560858 SDHCQ99643 169 aaPredicted RBP2.32□□□□□ -2.04
SPG11-223ENST00000560858 SEPT5Q99719 369 aaPredicted RBP2.32□□□□□ -2.04
SPG11-223ENST00000560858 GDF15Q99988 308 aa2.32□□□□□ -2.04
SPG11-223ENST00000560858 TMEM175Q9BSA9 504 aa2.32□□□□□ -2.04
SPG11-223ENST00000560858 CCM2Q9BSQ5 444 aa2.32□□□□□ -2.04
SPG11-223ENST00000560858 COPS4Q9BT78 406 aa2.32□□□□□ -2.04
SPG11-223ENST00000560858 DOHHQ9BU89 302 aa2.32□□□□□ -2.04
SPG11-223ENST00000560858 TRAF4Q9BUZ4 470 aaPredicted RBP2.32□□□□□ -2.04
SPG11-223ENST00000560858 HERC2P3Q9BVR0 1158 aa2.32□□□□□ -2.04
SPG11-223ENST00000560858 CDCA4Q9BXL8 241 aa2.32□□□□□ -2.04
SPG11-223ENST00000560858 GPR63Q9BZJ6 419 aa2.32□□□□□ -2.04
SPG11-223ENST00000560858 OR2B2Q9GZK3 357 aa2.32□□□□□ -2.04
SPG11-223ENST00000560858 CCDC90BQ9GZT6 254 aa2.32□□□□□ -2.04
SPG11-223ENST00000560858 RACGAP1Q9H0H5 632 aa2.32□□□□□ -2.04
SPG11-223ENST00000560858 TMEM38AQ9H6F2 299 aa2.32□□□□□ -2.04
SPG11-223ENST00000560858 ASB8Q9H765 288 aa2.32□□□□□ -2.04
SPG11-223ENST00000560858 SYNDIG1Q9H7V2 258 aa2.32□□□□□ -2.04
SPG11-223ENST00000560858 REEP1Q9H902 201 aa2.32□□□□□ -2.04
SPG11-223ENST00000560858 SIAEQ9HAT2 523 aa2.32□□□□□ -2.04
SPG11-223ENST00000560858 C3orf14Q9HBI5 128 aa2.32□□□□□ -2.04
SPG11-223ENST00000560858 ZBTB20Q9HC78 741 aaPredicted RBP2.32□□□□□ -2.04
SPG11-223ENST00000560858 BPIFA1Q9NP55 256 aa2.32□□□□□ -2.04
SPG11-223ENST00000560858 FZD3Q9NPG1 666 aa2.32□□□□□ -2.04
SPG11-223ENST00000560858 PCDH12Q9NPG4 1184 aa2.32□□□□□ -2.04
SPG11-223ENST00000560858 IL26Q9NPH9 171 aa2.32□□□□□ -2.04
SPG11-223ENST00000560858 TRPV5Q9NQA5 729 aa2.32□□□□□ -2.04
SPG11-223ENST00000560858 ASAH2Q9NR71 780 aa2.32□□□□□ -2.04
SPG11-223ENST00000560858 AASDHPPTQ9NRN7 309 aa2.32□□□□□ -2.04
SPG11-223ENST00000560858 DNAJC11Q9NVH1 559 aa2.32□□□□□ -2.04
SPG11-223ENST00000560858 FBXL12Q9NXK8 326 aa2.32□□□□□ -2.04
SPG11-223ENST00000560858 ZNF226Q9NYT6 803 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms