RNA–Protein interactions for RNA: ENST00000560829.5

SNX1-211, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 1,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-211ENST00000560829 GASTP01350 101 aa12□□□□□ -0.49
SNX1-211ENST00000560829 RPLP0P05388 317 aaKnown RBP12□□□□□ -0.49
SNX1-211ENST00000560829 SYPP08247 313 aa12□□□□□ -0.49
SNX1-211ENST00000560829 CCDC159P0C7I6 412 aa12□□□□□ -0.49
SNX1-211ENST00000560829 CKMT1AP12532 417 aa12□□□□□ -0.49
SNX1-211ENST00000560829 ALAS2P22557 587 aa12□□□□□ -0.49
SNX1-211ENST00000560829 SSTR4P31391 388 aa12□□□□□ -0.49
SNX1-211ENST00000560829 TRHRP34981 398 aaPredicted RBP12□□□□□ -0.49
SNX1-211ENST00000560829 GABARAPL2P60520 117 aa12□□□□□ -0.49
SNX1-211ENST00000560829 CXCR4P61073 352 aa12□□□□□ -0.49
SNX1-211ENST00000560829 FGD3Q5JSP0 725 aa12□□□□□ -0.49
SNX1-211ENST00000560829 PRAMEF17Q5VTA0 474 aa12□□□□□ -0.49
SNX1-211ENST00000560829 CLIP4Q8N3C7 705 aa12□□□□□ -0.49
SNX1-211ENST00000560829 OR7G1Q8NGA0 311 aa12□□□□□ -0.49
SNX1-211ENST00000560829 DIO2Q92813 273 aa12□□□□□ -0.49
SNX1-211ENST00000560829 FNDC11Q9BVV2 318 aa12□□□□□ -0.49
SNX1-211ENST00000560829 DGCR6LQ9BY27 220 aa12□□□□□ -0.49
SNX1-211ENST00000560829 ANKRD19PQ9H560 264 aa12□□□□□ -0.49
SNX1-211ENST00000560829 NDOR1Q9UHB4 597 aa12□□□□□ -0.49
SNX1-211ENST00000560829 BLOC1S6Q9UL45 172 aa12□□□□□ -0.49
SNX1-211ENST00000560829 OR2W5A6NFC9 320 aa11.99□□□□□ -0.49
SNX1-211ENST00000560829 KCNK2O95069 426 aa11.99□□□□□ -0.49
SNX1-211ENST00000560829 SP9P0CG40 484 aa11.99□□□□□ -0.49
SNX1-211ENST00000560829 NID1P14543 1247 aa11.99□□□□□ -0.49
SNX1-211ENST00000560829 IL7RP16871 459 aa11.99□□□□□ -0.49
SNX1-211ENST00000560829 FBLP22087 321 aaKnown RBP11.99□□□□□ -0.49
SNX1-211ENST00000560829 GGT2P36268 569 aa11.99□□□□□ -0.49
SNX1-211ENST00000560829 ESRRGP62508 458 aa11.99□□□□□ -0.49
SNX1-211ENST00000560829 IL5RAQ01344 420 aa11.99□□□□□ -0.49
SNX1-211ENST00000560829 ZNF267Q14586 743 aaPredicted RBP11.99□□□□□ -0.49
SNX1-211ENST00000560829 GPR68Q15743 365 aa11.99□□□□□ -0.49
SNX1-211ENST00000560829 MAPK14Q16539 360 aa11.99□□□□□ -0.49
SNX1-211ENST00000560829 RHBDD2Q6NTF9 364 aa11.99□□□□□ -0.49
SNX1-211ENST00000560829 BORAQ6PGQ7 559 aa11.99□□□□□ -0.49
SNX1-211ENST00000560829 ZNF836Q6ZNA1 936 aa11.99□□□□□ -0.49
SNX1-211ENST00000560829 ZNF615Q8N8J6 731 aa11.99□□□□□ -0.49
SNX1-211ENST00000560829 MORN4Q8NDC4 146 aa11.99□□□□□ -0.49
SNX1-211ENST00000560829 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.99□□□□□ -0.49
SNX1-211ENST00000560829 CNDP2Q96KP4 475 aaKnown RBP11.99□□□□□ -0.49
SNX1-211ENST00000560829 PTCHD1Q96NR3 888 aa11.99□□□□□ -0.49
SNX1-211ENST00000560829 EVA1AQ9H8M9 152 aa11.99□□□□□ -0.49
SNX1-211ENST00000560829 FBXO34Q9NWN3 711 aa11.99□□□□□ -0.49
SNX1-211ENST00000560829 KCNE5Q9UJ90 142 aa11.99□□□□□ -0.49
SNX1-211ENST00000560829 PCDHGA6Q9Y5G7 932 aa11.99□□□□□ -0.49
SNX1-211ENST00000560829 MYO15AQ9UKN7 3530 aa11.99□□□□□ -0.49
SNX1-211ENST00000560829 IGHV5-10-1A0A0J9YXX1 117 aa11.98□□□□□ -0.49
SNX1-211ENST00000560829 CENPVL1A0A0U1RR11 272 aa11.98□□□□□ -0.49
SNX1-211ENST00000560829 GXYLT2A0PJZ3 443 aa11.98□□□□□ -0.49
SNX1-211ENST00000560829 CLPSP04118 112 aa11.98□□□□□ -0.49
SNX1-211ENST00000560829 RGS8P57771 180 aaPredicted RBP11.98□□□□□ -0.49
SNX1-211ENST00000560829 MAD2L1BPQ15013 274 aaPredicted RBP11.98□□□□□ -0.49
SNX1-211ENST00000560829 PGBD2Q6P3X8 592 aa11.98□□□□□ -0.49
SNX1-211ENST00000560829 PODNL1Q6PEZ8 512 aa11.98□□□□□ -0.49
SNX1-211ENST00000560829 ZNF773Q6PK81 442 aa11.98□□□□□ -0.49
SNX1-211ENST00000560829 KLHL17Q6TDP4 642 aa11.98□□□□□ -0.49
SNX1-211ENST00000560829 CD300LDQ6UXZ3 194 aa11.98□□□□□ -0.49
SNX1-211ENST00000560829 OR2I1PQ8NGU4 316 aa11.98□□□□□ -0.49
SNX1-211ENST00000560829 PTPMT1Q8WUK0 201 aaPredicted RBP11.98□□□□□ -0.49
SNX1-211ENST00000560829 POLR2J2Q9GZM3 115 aaKnown RBP11.98□□□□□ -0.49
SNX1-211ENST00000560829 RBM38Q9H0Z9 239 aaKnown RBP11.98□□□□□ -0.49
SNX1-211ENST00000560829 POLR2J3Q9H1A7 115 aaKnown RBP11.98□□□□□ -0.49
SNX1-211ENST00000560829 OR10A5Q9H207 317 aa11.98□□□□□ -0.49
SNX1-211ENST00000560829 PRODH2Q9UF12 536 aa11.98□□□□□ -0.49
SNX1-211ENST00000560829 ERVK-19Q9WJR5 959 aa11.98□□□□□ -0.49
SNX1-211ENST00000560829 TCRBV16S1A1N1A0A5B0 115 aa11.97□□□□□ -0.49
SNX1-211ENST00000560829 CDHR4A6H8M9 788 aa11.97□□□□□ -0.49
SNX1-211ENST00000560829 SYNDIG1LA6NDD5 238 aa11.97□□□□□ -0.49
SNX1-211ENST00000560829 SLC1A7O00341 560 aa11.97□□□□□ -0.49
SNX1-211ENST00000560829 AP3D1O14617 1153 aa11.97□□□□□ -0.49
SNX1-211ENST00000560829 OR10H3O60404 316 aa11.97□□□□□ -0.49
SNX1-211ENST00000560829 OR5F1O95221 314 aa11.97□□□□□ -0.49
SNX1-211ENST00000560829 ANGPTL1O95841 491 aa11.97□□□□□ -0.49
SNX1-211ENST00000560829 IFNA16P05015 189 aa11.97□□□□□ -0.49
SNX1-211ENST00000560829 AGXTP21549 392 aa11.97□□□□□ -0.49
SNX1-211ENST00000560829 RORAP35398 523 aa11.97□□□□□ -0.49
SNX1-211ENST00000560829 DUSP3P51452 185 aaPredicted RBP11.97□□□□□ -0.49
SNX1-211ENST00000560829 RHAGQ02094 409 aa11.97□□□□□ -0.49
SNX1-211ENST00000560829 TEKQ02763 1124 aa11.97□□□□□ -0.49
SNX1-211ENST00000560829 ST3GAL3Q11203 375 aa11.97□□□□□ -0.49
SNX1-211ENST00000560829 ARHGAP40Q5TG30 622 aa11.97□□□□□ -0.49
SNX1-211ENST00000560829 FIGNL1Q6PIW4 674 aa11.97□□□□□ -0.49
SNX1-211ENST00000560829 NPSR1Q6W5P4 371 aa11.97□□□□□ -0.49
SNX1-211ENST00000560829 TOR1AIP2Q8NFQ8 470 aa11.97□□□□□ -0.49
SNX1-211ENST00000560829 C16orf52Q8NHV5 167 aa11.97□□□□□ -0.49
SNX1-211ENST00000560829 IFI44Q8TCB0 444 aa11.97□□□□□ -0.49
SNX1-211ENST00000560829 GTPBP3Q969Y2 492 aaKnown RBP11.97□□□□□ -0.49
SNX1-211ENST00000560829 CNPPD1Q9BV87 410 aa11.97□□□□□ -0.49
SNX1-211ENST00000560829 UCK2Q9BZX2 261 aa11.97□□□□□ -0.49
SNX1-211ENST00000560829 ADNPQ9H2P0 1102 aa11.97□□□□□ -0.49
SNX1-211ENST00000560829 MKKSQ9NPJ1 570 aaPredicted RBP11.97□□□□□ -0.49
SNX1-211ENST00000560829 SIDT1Q9NXL6 827 aaKnown RBP11.97□□□□□ -0.49
SNX1-211ENST00000560829 REV1Q9UBZ9 1251 aa11.97□□□□□ -0.49
SNX1-211ENST00000560829 FTSJ1Q9UET6 329 aa11.97□□□□□ -0.49
SNX1-211ENST00000560829 DTX4Q9Y2E6 619 aa11.97□□□□□ -0.49
SNX1-211ENST00000560829 CLDN24A6NM45 220 aa11.97□□□□□ -0.49
SNX1-211ENST00000560829 C17orf105B2RV13 164 aa11.97□□□□□ -0.49
SNX1-211ENST00000560829 PEX12O00623 359 aa11.97□□□□□ -0.49
SNX1-211ENST00000560829 FRS3O43559 492 aa11.97□□□□□ -0.49
SNX1-211ENST00000560829 FMO6PO60774 539 aa11.97□□□□□ -0.49
SNX1-211ENST00000560829 CYP7B1O75881 506 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms