RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 LSM12Q3MHD2 195 aaKnown RBP11.84□□□□□ -0.51
CTDSPL2-209ENST00000560620 EIPR1Q53HC9 387 aa11.84□□□□□ -0.51
CTDSPL2-209ENST00000560620 SP5Q6BEB4 398 aaPredicted RBP11.84□□□□□ -0.51
CTDSPL2-209ENST00000560620 TMEM81Q6P7N7 255 aa11.84□□□□□ -0.51
CTDSPL2-209ENST00000560620 B3GNT6Q6ZMB0 384 aa11.84□□□□□ -0.51
CTDSPL2-209ENST00000560620 ACAD11Q709F0 780 aa11.84□□□□□ -0.51
CTDSPL2-209ENST00000560620 GALNT10Q86SR1 603 aa11.84□□□□□ -0.51
CTDSPL2-209ENST00000560620 YRDCQ86U90 279 aaKnown RBP11.84□□□□□ -0.51
CTDSPL2-209ENST00000560620 PLCZ1Q86YW0 608 aa11.84□□□□□ -0.51
CTDSPL2-209ENST00000560620 RPRMLQ8N4K4 120 aa11.84□□□□□ -0.51
CTDSPL2-209ENST00000560620 NATD1Q8N6N6 113 aa11.84□□□□□ -0.51
CTDSPL2-209ENST00000560620 CDRT4Q8N9R6 151 aa11.84□□□□□ -0.51
CTDSPL2-209ENST00000560620 FAM83FQ8NEG4 500 aaPredicted RBP11.84□□□□□ -0.51
CTDSPL2-209ENST00000560620 NUDT8Q8WV74 236 aa11.84□□□□□ -0.51
CTDSPL2-209ENST00000560620 TLCD1Q96CP7 247 aa11.84□□□□□ -0.51
CTDSPL2-209ENST00000560620 DTNBP1Q96EV8 351 aa11.84□□□□□ -0.51
CTDSPL2-209ENST00000560620 OTUB1Q96FW1 271 aaPredicted RBP11.84□□□□□ -0.51
CTDSPL2-209ENST00000560620 LMF2Q9BU23 707 aaKnown RBP11.84□□□□□ -0.51
CTDSPL2-209ENST00000560620 DUSP26Q9BV47 211 aa11.84□□□□□ -0.51
CTDSPL2-209ENST00000560620 DPY30Q9C005 99 aa11.84□□□□□ -0.51
CTDSPL2-209ENST00000560620 MANSC1Q9H8J5 431 aa11.84□□□□□ -0.51
CTDSPL2-209ENST00000560620 THAP1Q9NVV9 213 aa11.84□□□□□ -0.51
CTDSPL2-209ENST00000560620 PPP4R1LQ9P1A2 415 aa11.84□□□□□ -0.51
CTDSPL2-209ENST00000560620 DKKL1Q9UK85 242 aa11.84□□□□□ -0.51
CTDSPL2-209ENST00000560620 KLF2Q9Y5W3 355 aaPredicted RBP11.84□□□□□ -0.51
CTDSPL2-209ENST00000560620 FREM3P0C091 2139 aa11.83□□□□□ -0.52
CTDSPL2-209ENST00000560620 GXYLT2A0PJZ3 443 aa11.83□□□□□ -0.52
CTDSPL2-209ENST00000560620 TTC36A6NLP5 189 aa11.83□□□□□ -0.52
CTDSPL2-209ENST00000560620 CYSRT1A8MQ03 144 aa11.83□□□□□ -0.52
CTDSPL2-209ENST00000560620 C6orf47O95873 294 aa11.83□□□□□ -0.52
CTDSPL2-209ENST00000560620 HPNP05981 417 aa11.83□□□□□ -0.52
CTDSPL2-209ENST00000560620 IFI6P09912 130 aa11.83□□□□□ -0.52
CTDSPL2-209ENST00000560620 ALOX5P09917 674 aa11.83□□□□□ -0.52
CTDSPL2-209ENST00000560620 GABRA1P14867 456 aa11.83□□□□□ -0.52
CTDSPL2-209ENST00000560620 CCT3P49368 545 aaKnown RBP11.83□□□□□ -0.52
CTDSPL2-209ENST00000560620 PRIM2P49643 509 aa11.83□□□□□ -0.52
CTDSPL2-209ENST00000560620 DIO3P55073 304 aa11.83□□□□□ -0.52
CTDSPL2-209ENST00000560620 CLDN8P56748 225 aa11.83□□□□□ -0.52
CTDSPL2-209ENST00000560620 NUP107P57740 925 aa11.83□□□□□ -0.52
CTDSPL2-209ENST00000560620 MLC1Q15049 377 aa11.83□□□□□ -0.52
CTDSPL2-209ENST00000560620 AGBL2Q5U5Z8 902 aa11.83□□□□□ -0.52
CTDSPL2-209ENST00000560620 NXNQ6DKJ4 435 aa11.83□□□□□ -0.52
CTDSPL2-209ENST00000560620 WDSUB1Q8N9V3 476 aa11.83□□□□□ -0.52
CTDSPL2-209ENST00000560620 OR4K17Q8NGC6 315 aa11.83□□□□□ -0.52
CTDSPL2-209ENST00000560620 RAB3IL1Q8TBN0 382 aa11.83□□□□□ -0.52
CTDSPL2-209ENST00000560620 OR5P2Q8WZ92 322 aa11.83□□□□□ -0.52
CTDSPL2-209ENST00000560620 ABTB1Q969K4 478 aaPredicted RBP11.83□□□□□ -0.52
CTDSPL2-209ENST00000560620 FAM120BQ96EK7 910 aaKnown RBP11.83□□□□□ -0.52
CTDSPL2-209ENST00000560620 TBL1XR1Q9BZK7 514 aa11.83□□□□□ -0.52
CTDSPL2-209ENST00000560620 BHLHE41Q9C0J9 482 aaPredicted RBP11.83□□□□□ -0.52
CTDSPL2-209ENST00000560620 UBQLN3Q9H347 655 aa11.83□□□□□ -0.52
CTDSPL2-209ENST00000560620 MEAF6Q9HAF1 191 aa11.83□□□□□ -0.52
CTDSPL2-209ENST00000560620 CHST11Q9NPF2 352 aa11.83□□□□□ -0.52
CTDSPL2-209ENST00000560620 SDHAF3Q9NRP4 125 aa11.83□□□□□ -0.52
CTDSPL2-209ENST00000560620 PCDHGB4Q9UN71 923 aa11.83□□□□□ -0.52
CTDSPL2-209ENST00000560620 FAF1Q9UNN5 650 aaPredicted RBP11.83□□□□□ -0.52
CTDSPL2-209ENST00000560620 CAMK2AQ9UQM7 478 aa11.83□□□□□ -0.52
CTDSPL2-209ENST00000560620 GOLGA8QA0A0J9YX86 632 aa11.82□□□□□ -0.52
CTDSPL2-209ENST00000560620 GOLGA8OA6NCC3 632 aa11.82□□□□□ -0.52
CTDSPL2-209ENST00000560620 TRPC5OSA6NMA1 111 aa11.82□□□□□ -0.52
CTDSPL2-209ENST00000560620 GOLGA8NF8WBI6 632 aa11.82□□□□□ -0.52
CTDSPL2-209ENST00000560620 HDAC3O15379 428 aa11.82□□□□□ -0.52
CTDSPL2-209ENST00000560620 GMFGO60234 142 aa11.82□□□□□ -0.52
CTDSPL2-209ENST00000560620 UTS2O95399 124 aa11.82□□□□□ -0.52
CTDSPL2-209ENST00000560620 IL33O95760 270 aa11.82□□□□□ -0.52
CTDSPL2-209ENST00000560620 HMGN2P05204 90 aaKnown RBP11.82□□□□□ -0.52
CTDSPL2-209ENST00000560620 SNRPB2P08579 225 aaKnown RBP11.82□□□□□ -0.52
CTDSPL2-209ENST00000560620 HPGDP15428 266 aa11.82□□□□□ -0.52
CTDSPL2-209ENST00000560620 GRNP28799 593 aaKnown RBP11.82□□□□□ -0.52
CTDSPL2-209ENST00000560620 SLC18A1P54219 525 aa11.82□□□□□ -0.52
CTDSPL2-209ENST00000560620 NME5P56597 212 aa11.82□□□□□ -0.52
CTDSPL2-209ENST00000560620 LASP1Q14847 261 aaKnown RBP11.82□□□□□ -0.52
CTDSPL2-209ENST00000560620 C1orf185Q5T7R7 199 aa11.82□□□□□ -0.52
CTDSPL2-209ENST00000560620 OR4F3Q6IEY1 312 aa11.82□□□□□ -0.52
CTDSPL2-209ENST00000560620 MFSD12Q6NUT3 480 aa11.82□□□□□ -0.52
CTDSPL2-209ENST00000560620 FIGNL1Q6PIW4 674 aa11.82□□□□□ -0.52
CTDSPL2-209ENST00000560620 HDXQ7Z353 690 aa11.82□□□□□ -0.52
CTDSPL2-209ENST00000560620 IFNEQ86WN2 208 aa11.82□□□□□ -0.52
CTDSPL2-209ENST00000560620 CCDC71Q8IV32 467 aaPredicted RBP11.82□□□□□ -0.52
CTDSPL2-209ENST00000560620 PM20D2Q8IYS1 436 aa11.82□□□□□ -0.52
CTDSPL2-209ENST00000560620 ULK2Q8IYT8 1036 aa11.82□□□□□ -0.52
CTDSPL2-209ENST00000560620 MARVELD2Q8N4S9 558 aa11.82□□□□□ -0.52
CTDSPL2-209ENST00000560620 COX18Q8N8Q8 333 aa11.82□□□□□ -0.52
CTDSPL2-209ENST00000560620 SLC16A11Q8NCK7 471 aa11.82□□□□□ -0.52
CTDSPL2-209ENST00000560620 OR5AK3PQ8NH89 298 aa11.82□□□□□ -0.52
CTDSPL2-209ENST00000560620 ASB5Q8WWX0 329 aa11.82□□□□□ -0.52
CTDSPL2-209ENST00000560620 ARL8AQ96BM9 186 aa11.82□□□□□ -0.52
CTDSPL2-209ENST00000560620 COQ8BQ96D53 544 aa11.82□□□□□ -0.52
CTDSPL2-209ENST00000560620 C16orf58Q96GQ5 468 aa11.82□□□□□ -0.52
CTDSPL2-209ENST00000560620 TIMP4Q99727 224 aa11.82□□□□□ -0.52
CTDSPL2-209ENST00000560620 TTYH2Q9BSA4 534 aa11.82□□□□□ -0.52
CTDSPL2-209ENST00000560620 NEUROD4Q9HD90 331 aa11.82□□□□□ -0.52
CTDSPL2-209ENST00000560620 ASIC5Q9NY37 505 aa11.82□□□□□ -0.52
CTDSPL2-209ENST00000560620 TAS2R10Q9NYW0 307 aa11.82□□□□□ -0.52
CTDSPL2-209ENST00000560620 FLRT3Q9NZU0 649 aa11.82□□□□□ -0.52
CTDSPL2-209ENST00000560620 HAO1Q9UJM8 370 aa11.82□□□□□ -0.52
CTDSPL2-209ENST00000560620 FBXL2Q9UKC9 423 aa11.82□□□□□ -0.52
CTDSPL2-209ENST00000560620 RNF6Q9Y252 685 aa11.82□□□□□ -0.52
CTDSPL2-209ENST00000560620 RPH3AQ9Y2J0 694 aaPredicted RBP11.82□□□□□ -0.52
CTDSPL2-209ENST00000560620 PCNX1Q96RV3 2341 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms