RNA–Protein interactions for RNA: ENST00000560492.1

CDC42BPB-207, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-207ENST00000560492 RFX3P48380 749 aa9.44□□□□□ -0.9
CDC42BPB-207ENST00000560492 SMCPP49901 116 aaPredicted RBP9.44□□□□□ -0.9
CDC42BPB-207ENST00000560492 EMDP50402 254 aa9.44□□□□□ -0.9
CDC42BPB-207ENST00000560492 RPS4XP62701 263 aaKnown RBP9.44□□□□□ -0.9
CDC42BPB-207ENST00000560492 GUCA2AQ02747 115 aa9.44□□□□□ -0.9
CDC42BPB-207ENST00000560492 DUSP2Q05923 314 aa9.44□□□□□ -0.9
CDC42BPB-207ENST00000560492 LGSNQ5TDP6 509 aa9.44□□□□□ -0.9
CDC42BPB-207ENST00000560492 MROH9Q5TGP6 573 aa9.44□□□□□ -0.9
CDC42BPB-207ENST00000560492 TREML4Q6UXN2 200 aa9.44□□□□□ -0.9
CDC42BPB-207ENST00000560492 CCDC116Q8IYX3 515 aa9.44□□□□□ -0.9
CDC42BPB-207ENST00000560492 CEP112Q8N8E3 955 aa9.44□□□□□ -0.9
CDC42BPB-207ENST00000560492 PTGR2Q8N8N7 351 aaPredicted RBP9.44□□□□□ -0.9
CDC42BPB-207ENST00000560492 L3MBTL4Q8NA19 623 aa9.44□□□□□ -0.9
CDC42BPB-207ENST00000560492 OR52B6Q8NGF0 335 aa9.44□□□□□ -0.9
CDC42BPB-207ENST00000560492 RHEBL1Q8TAI7 183 aa9.44□□□□□ -0.9
CDC42BPB-207ENST00000560492 FBF1Q8TES7 1133 aa9.44□□□□□ -0.9
CDC42BPB-207ENST00000560492 TMEM158Q8WZ71 300 aa9.44□□□□□ -0.9
CDC42BPB-207ENST00000560492 AKAP1Q92667 903 aaKnown RBP eCLIP9.44□□□□□ -0.9
CDC42BPB-207ENST00000560492 EXOSC8Q96B26 276 aaKnown RBP9.44□□□□□ -0.9
CDC42BPB-207ENST00000560492 TACO1Q9BSH4 297 aaKnown RBP9.44□□□□□ -0.9
CDC42BPB-207ENST00000560492 VPS11Q9H270 941 aa9.44□□□□□ -0.9
CDC42BPB-207ENST00000560492 SDHAF3Q9NRP4 125 aa9.44□□□□□ -0.9
CDC42BPB-207ENST00000560492 GIMAP4Q9NUV9 329 aa9.44□□□□□ -0.9
CDC42BPB-207ENST00000560492 PSD3Q9NYI0 1048 aa9.44□□□□□ -0.9
CDC42BPB-207ENST00000560492 MED11Q9P086 117 aa9.44□□□□□ -0.9
CDC42BPB-207ENST00000560492 UTS2RQ9UKP6 389 aa9.44□□□□□ -0.9
CDC42BPB-207ENST00000560492 MRPS18CQ9Y3D5 142 aaKnown RBP9.44□□□□□ -0.9
CDC42BPB-207ENST00000560492 ZNF337Q9Y3M9 751 aa9.44□□□□□ -0.9
CDC42BPB-207ENST00000560492 OR7A17O14581 309 aa9.43□□□□□ -0.9
CDC42BPB-207ENST00000560492 EIF1AYO14602 144 aaKnown RBP9.43□□□□□ -0.9
CDC42BPB-207ENST00000560492 TO15178 435 aa9.43□□□□□ -0.9
CDC42BPB-207ENST00000560492 EIF3HO15372 352 aaKnown RBP eCLIP9.43□□□□□ -0.9
CDC42BPB-207ENST00000560492 ZIC3O60481 467 aa9.43□□□□□ -0.9
CDC42BPB-207ENST00000560492 TSPAN2O60636 221 aa9.43□□□□□ -0.9
CDC42BPB-207ENST00000560492 TNFRSF21O75509 655 aa9.43□□□□□ -0.9
CDC42BPB-207ENST00000560492 BCAS2O75934 225 aaPredicted RBP9.43□□□□□ -0.9
CDC42BPB-207ENST00000560492 C2P06681 752 aa9.43□□□□□ -0.9
CDC42BPB-207ENST00000560492 C8BP07358 591 aa9.43□□□□□ -0.9
CDC42BPB-207ENST00000560492 GSTA2P09210 222 aa9.43□□□□□ -0.9
CDC42BPB-207ENST00000560492 PPP3CBP16298 524 aa9.43□□□□□ -0.9
CDC42BPB-207ENST00000560492 EVI2BP34910 448 aa9.43□□□□□ -0.9
CDC42BPB-207ENST00000560492 EIF1AXP47813 144 aaKnown RBP9.43□□□□□ -0.9
CDC42BPB-207ENST00000560492 PCYT1AP49585 367 aa9.43□□□□□ -0.9
CDC42BPB-207ENST00000560492 CLK3P49761 638 aaKnown RBP9.43□□□□□ -0.9
CDC42BPB-207ENST00000560492 SUCLG1P53597 346 aaKnown RBP9.43□□□□□ -0.9
CDC42BPB-207ENST00000560492 CLDN15P56746 228 aa9.43□□□□□ -0.9
CDC42BPB-207ENST00000560492 CLDN20P56880 219 aa9.43□□□□□ -0.9
CDC42BPB-207ENST00000560492 B3GALT5-AS1P59052 145 aa9.43□□□□□ -0.9
CDC42BPB-207ENST00000560492 MGAT2Q10469 447 aa9.43□□□□□ -0.9
CDC42BPB-207ENST00000560492 FAPQ12884 760 aa9.43□□□□□ -0.9
CDC42BPB-207ENST00000560492 CAPRIN1Q14444 709 aaKnown RBP9.43□□□□□ -0.9
CDC42BPB-207ENST00000560492 ACAP2Q15057 778 aa9.43□□□□□ -0.9
CDC42BPB-207ENST00000560492 HEPHL1Q6MZM0 1159 aa9.43□□□□□ -0.9
CDC42BPB-207ENST00000560492 FAM214BQ7L5A3 538 aa9.43□□□□□ -0.9
CDC42BPB-207ENST00000560492 MILR1Q7Z6M3 343 aa9.43□□□□□ -0.9
CDC42BPB-207ENST00000560492 STK32CQ86UX6 486 aa9.43□□□□□ -0.9
CDC42BPB-207ENST00000560492 CENPLQ8N0S6 344 aaPredicted RBP9.43□□□□□ -0.9
CDC42BPB-207ENST00000560492 METTL4Q8N3J2 472 aa9.43□□□□□ -0.9
CDC42BPB-207ENST00000560492 ZNF611Q8N823 705 aa9.43□□□□□ -0.9
CDC42BPB-207ENST00000560492 OR9A2Q8NGT5 310 aa9.43□□□□□ -0.9
CDC42BPB-207ENST00000560492 CDC26Q8NHZ8 85 aa9.43□□□□□ -0.9
CDC42BPB-207ENST00000560492 SELENOMQ8WWX9 145 aa9.43□□□□□ -0.9
CDC42BPB-207ENST00000560492 CNRIP1Q96F85 164 aaPredicted RBP9.43□□□□□ -0.9
CDC42BPB-207ENST00000560492 SLC35A4Q96G79 324 aa9.43□□□□□ -0.9
CDC42BPB-207ENST00000560492 HBEGFQ99075 208 aa9.43□□□□□ -0.9
CDC42BPB-207ENST00000560492 NAPGQ99747 312 aaPredicted RBP9.43□□□□□ -0.9
CDC42BPB-207ENST00000560492 LRRC1Q9BTT6 524 aa9.43□□□□□ -0.9
CDC42BPB-207ENST00000560492 REG4Q9BYZ8 158 aa9.43□□□□□ -0.9
CDC42BPB-207ENST00000560492 ACTR6Q9GZN1 396 aa9.43□□□□□ -0.9
CDC42BPB-207ENST00000560492 RNF122Q9H9V4 155 aa9.43□□□□□ -0.9
CDC42BPB-207ENST00000560492 FOLH1BQ9HBA9 442 aa9.43□□□□□ -0.9
CDC42BPB-207ENST00000560492 NMRK1Q9NWW6 199 aa9.43□□□□□ -0.9
CDC42BPB-207ENST00000560492 STOML1Q9UBI4 398 aa9.43□□□□□ -0.9
CDC42BPB-207ENST00000560492 ZNF639Q9UID6 485 aa9.43□□□□□ -0.9
CDC42BPB-207ENST00000560492 CES1P1Q9UKY3 287 aa9.43□□□□□ -0.9
CDC42BPB-207ENST00000560492 GPR55Q9Y2T6 319 aaPredicted RBP9.43□□□□□ -0.9
CDC42BPB-207ENST00000560492 ZNF175Q9Y473 711 aa9.43□□□□□ -0.9
CDC42BPB-207ENST00000560492 MXRA5Q9NR99 2828 aa9.43□□□□□ -0.9
CDC42BPB-207ENST00000560492 A0A096LPK6 155 aa9.42□□□□□ -0.9
CDC42BPB-207ENST00000560492 GNG14A0A1W2PPG7 69 aa9.42□□□□□ -0.9
CDC42BPB-207ENST00000560492 OR2M5A3KFT3 312 aa9.42□□□□□ -0.9
CDC42BPB-207ENST00000560492 TP73O15350 636 aa9.42□□□□□ -0.9
CDC42BPB-207ENST00000560492 SMIM24O75264 130 aa9.42□□□□□ -0.9
CDC42BPB-207ENST00000560492 SYNGR4O95473 234 aa9.42□□□□□ -0.9
CDC42BPB-207ENST00000560492 CGAP01215 116 aa9.42□□□□□ -0.9
CDC42BPB-207ENST00000560492 THBDP07204 575 aa9.42□□□□□ -0.9
CDC42BPB-207ENST00000560492 LOXP28300 417 aaPredicted RBP9.42□□□□□ -0.9
CDC42BPB-207ENST00000560492 TYK2P29597 1187 aa9.42□□□□□ -0.9
CDC42BPB-207ENST00000560492 IDUAP35475 653 aa9.42□□□□□ -0.9
CDC42BPB-207ENST00000560492 CDKN1AP38936 164 aa9.42□□□□□ -0.9
CDC42BPB-207ENST00000560492 PNLIPRP2P54317 469 aa9.42□□□□□ -0.9
CDC42BPB-207ENST00000560492 GANABQ14697 944 aaKnown RBP9.42□□□□□ -0.9
CDC42BPB-207ENST00000560492 CHRFAM7AQ494W8 412 aa9.42□□□□□ -0.9
CDC42BPB-207ENST00000560492 C22orf34Q6ZV56 151 aa9.42□□□□□ -0.9
CDC42BPB-207ENST00000560492 SH2D5Q6ZV89 423 aa9.42□□□□□ -0.9
CDC42BPB-207ENST00000560492 CCDC91Q7Z6B0 441 aa9.42□□□□□ -0.9
CDC42BPB-207ENST00000560492 C1orf52Q8N6N3 182 aaKnown RBP9.42□□□□□ -0.9
CDC42BPB-207ENST00000560492 OR2M3Q8NG83 312 aa9.42□□□□□ -0.9
CDC42BPB-207ENST00000560492 OR4F6Q8NGB9 312 aa9.42□□□□□ -0.9
CDC42BPB-207ENST00000560492 OR6K3Q8NGY3 331 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms