RNA–Protein interactions for RNA: ENST00000559873.5

USP3-216, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5

Gene USP3, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-216ENST00000559873 LYPD8Q6UX82 237 aa9.27□□□□□ -0.93
USP3-216ENST00000559873 CLEC4FQ8N1N0 589 aa9.27□□□□□ -0.93
USP3-216ENST00000559873 ZNF527Q8NB42 609 aa9.27□□□□□ -0.93
USP3-216ENST00000559873 OR10G3Q8NGC4 313 aa9.27□□□□□ -0.93
USP3-216ENST00000559873 OR5D16Q8NGK9 328 aa9.27□□□□□ -0.93
USP3-216ENST00000559873 OR5M3Q8NGP4 307 aa9.27□□□□□ -0.93
USP3-216ENST00000559873 PNPT1Q8TCS8 783 aaKnown RBP9.27□□□□□ -0.93
USP3-216ENST00000559873 SPPL2AQ8TCT8 520 aa9.27□□□□□ -0.93
USP3-216ENST00000559873 OIT3Q8WWZ8 545 aa9.27□□□□□ -0.93
USP3-216ENST00000559873 PIK3R3Q92569 461 aa9.27□□□□□ -0.93
USP3-216ENST00000559873 SIGLEC12Q96PQ1 595 aa9.27□□□□□ -0.93
USP3-216ENST00000559873 ADOQ96SZ5 270 aa9.27□□□□□ -0.93
USP3-216ENST00000559873 CGREF1Q99674 301 aa9.27□□□□□ -0.93
USP3-216ENST00000559873 HOXD1Q9GZZ0 328 aa9.27□□□□□ -0.93
USP3-216ENST00000559873 EFCAB1Q9HAE3 211 aa9.27□□□□□ -0.93
USP3-216ENST00000559873 SLC52A3Q9NQ40 469 aa9.27□□□□□ -0.93
USP3-216ENST00000559873 KLHL1Q9NR64 748 aa9.27□□□□□ -0.93
USP3-216ENST00000559873 POLE3Q9NRF9 147 aa9.27□□□□□ -0.93
USP3-216ENST00000559873 CALML5Q9NZT1 146 aa9.27□□□□□ -0.93
USP3-216ENST00000559873 P2RX2Q9UBL9 471 aa9.27□□□□□ -0.93
USP3-216ENST00000559873 B4GALT7Q9UBV7 327 aa9.27□□□□□ -0.93
USP3-216ENST00000559873 BOKQ9UMX3 212 aaPredicted RBP9.27□□□□□ -0.93
USP3-216ENST00000559873 AP3M1Q9Y2T2 418 aa9.27□□□□□ -0.93
USP3-216ENST00000559873 PCDHGA10Q9Y5H3 936 aa9.27□□□□□ -0.93
USP3-216ENST00000559873 GMEB1Q9Y692 573 aa9.27□□□□□ -0.93
USP3-216ENST00000559873 CHCHD2Q9Y6H1 151 aaPredicted RBP9.27□□□□□ -0.93
USP3-216ENST00000559873 TRBV5-3A0A0A0MS03 114 aa9.26□□□□□ -0.93
USP3-216ENST00000559873 GXYLT2A0PJZ3 443 aa9.26□□□□□ -0.93
USP3-216ENST00000559873 ANKRD33BA6NCL7 494 aa9.26□□□□□ -0.93
USP3-216ENST00000559873 ZNF354AO60765 605 aaPredicted RBP9.26□□□□□ -0.93
USP3-216ENST00000559873 UGT2B11O75310 529 aa9.26□□□□□ -0.93
USP3-216ENST00000559873 NME6O75414 186 aaPredicted RBP9.26□□□□□ -0.93
USP3-216ENST00000559873 STX11O75558 287 aa9.26□□□□□ -0.93
USP3-216ENST00000559873 KCNK2O95069 426 aa9.26□□□□□ -0.93
USP3-216ENST00000559873 SNX4O95219 450 aa9.26□□□□□ -0.93
USP3-216ENST00000559873 RASAL1O95294 804 aa9.26□□□□□ -0.93
USP3-216ENST00000559873 CRYABP02511 175 aaKnown RBP9.26□□□□□ -0.93
USP3-216ENST00000559873 NGFRP08138 427 aa9.26□□□□□ -0.93
USP3-216ENST00000559873 GUSBP08236 651 aa9.26□□□□□ -0.93
USP3-216ENST00000559873 OR12D1P0DN82 309 aa9.26□□□□□ -0.93
USP3-216ENST00000559873 MASP1P48740 699 aa9.26□□□□□ -0.93
USP3-216ENST00000559873 MAN2A2P49641 1150 aa9.26□□□□□ -0.93
USP3-216ENST00000559873 ART3Q13508 389 aa9.26□□□□□ -0.93
USP3-216ENST00000559873 ARHGAP11BQ3KRB8 267 aa9.26□□□□□ -0.93
USP3-216ENST00000559873 GTDC1Q4AE62 458 aa9.26□□□□□ -0.93
USP3-216ENST00000559873 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.26□□□□□ -0.93
USP3-216ENST00000559873 SLC30A6Q6NXT4 461 aa9.26□□□□□ -0.93
USP3-216ENST00000559873 FIGNL1Q6PIW4 674 aa9.26□□□□□ -0.93
USP3-216ENST00000559873 FAM180AQ6UWF9 173 aa9.26□□□□□ -0.93
USP3-216ENST00000559873 GALNTL5Q7Z4T8 443 aa9.26□□□□□ -0.93
USP3-216ENST00000559873 PACS2Q86VP3 889 aa9.26□□□□□ -0.93
USP3-216ENST00000559873 RETREG3Q86VR2 466 aa9.26□□□□□ -0.93
USP3-216ENST00000559873 POU5F2Q8N7G0 328 aa9.26□□□□□ -0.93
USP3-216ENST00000559873 CHDHQ8NE62 594 aaPredicted RBP9.26□□□□□ -0.93
USP3-216ENST00000559873 CATSPER1Q8NEC5 780 aa9.26□□□□□ -0.93
USP3-216ENST00000559873 OR4N2Q8NGD1 307 aa9.26□□□□□ -0.93
USP3-216ENST00000559873 OR8J3Q8NGG0 315 aa9.26□□□□□ -0.93
USP3-216ENST00000559873 XAGE5Q8WWM1 108 aa9.26□□□□□ -0.93
USP3-216ENST00000559873 HGDQ93099 445 aa9.26□□□□□ -0.93
USP3-216ENST00000559873 RCN3Q96D15 328 aa9.26□□□□□ -0.93
USP3-216ENST00000559873 OTUB1Q96FW1 271 aaPredicted RBP9.26□□□□□ -0.93
USP3-216ENST00000559873 AURKBQ96GD4 344 aaPredicted RBP9.26□□□□□ -0.93
USP3-216ENST00000559873 ZNF597Q96LX8 424 aa9.26□□□□□ -0.93
USP3-216ENST00000559873 ANKRD27Q96NW4 1050 aa9.26□□□□□ -0.93
USP3-216ENST00000559873 FAM173AQ9BQD7 235 aa9.26□□□□□ -0.93
USP3-216ENST00000559873 DOHHQ9BU89 302 aa9.26□□□□□ -0.93
USP3-216ENST00000559873 OSBPL11Q9BXB4 747 aa9.26□□□□□ -0.93
USP3-216ENST00000559873 SERHL2Q9H4I8 314 aa9.26□□□□□ -0.93
USP3-216ENST00000559873 SDHAF3Q9NRP4 125 aa9.26□□□□□ -0.93
USP3-216ENST00000559873 AGPAT4Q9NRZ5 378 aa9.26□□□□□ -0.93
USP3-216ENST00000559873 NDE1Q9NXR1 346 aa9.26□□□□□ -0.93
USP3-216ENST00000559873 VAPAQ9P0L0 249 aa9.26□□□□□ -0.93
USP3-216ENST00000559873 CSAG2Q9Y5P2 127 aa9.26□□□□□ -0.93
USP3-216ENST00000559873 NUP214P35658 2090 aaPredicted RBP9.26□□□□□ -0.93
USP3-216ENST00000559873 TNRC6AQ8NDV7 1962 aaKnown RBP9.25□□□□□ -0.93
USP3-216ENST00000559873 CHD6Q8TD26 2715 aa9.25□□□□□ -0.93
USP3-216ENST00000559873 TTLL8A6PVC2 850 aa9.25□□□□□ -0.93
USP3-216ENST00000559873 C5orf58C9J3I9 102 aa9.25□□□□□ -0.93
USP3-216ENST00000559873 H3BNH8 94 aa9.25□□□□□ -0.93
USP3-216ENST00000559873 HMGN4O00479 90 aa9.25□□□□□ -0.93
USP3-216ENST00000559873 FBP2O00757 339 aa9.25□□□□□ -0.93
USP3-216ENST00000559873 SCDO00767 359 aa9.25□□□□□ -0.93
USP3-216ENST00000559873 PEX1O43933 1283 aa9.25□□□□□ -0.93
USP3-216ENST00000559873 ICOSLGO75144 302 aa9.25□□□□□ -0.93
USP3-216ENST00000559873 SORBS2O94875 1100 aaKnown RBP9.25□□□□□ -0.93
USP3-216ENST00000559873 CCL3P10147 92 aa9.25□□□□□ -0.93
USP3-216ENST00000559873 NR2F1P10589 423 aa9.25□□□□□ -0.93
USP3-216ENST00000559873 CYP4B1P13584 511 aa9.25□□□□□ -0.93
USP3-216ENST00000559873 ZNF24P17028 368 aa9.25□□□□□ -0.93
USP3-216ENST00000559873 HOXB9P17482 250 aaPredicted RBP9.25□□□□□ -0.93
USP3-216ENST00000559873 ENDOUP21128 410 aaKnown RBP9.25□□□□□ -0.93
USP3-216ENST00000559873 ELAVL4P26378 380 aaKnown RBP9.25□□□□□ -0.93
USP3-216ENST00000559873 EVI2BP34910 448 aa9.25□□□□□ -0.93
USP3-216ENST00000559873 MEOX1P50221 254 aa9.25□□□□□ -0.93
USP3-216ENST00000559873 NUDT2P50583 147 aa9.25□□□□□ -0.93
USP3-216ENST00000559873 CRISP3P54108 245 aa9.25□□□□□ -0.93
USP3-216ENST00000559873 PLGLB1Q02325 96 aa9.25□□□□□ -0.93
USP3-216ENST00000559873 RGNQ15493 299 aa9.25□□□□□ -0.93
USP3-216ENST00000559873 CYP51A1Q16850 503 aa9.25□□□□□ -0.93
USP3-216ENST00000559873 FLYWCH1Q4VC44 716 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms