RNA–Protein interactions for RNA: ENST00000559694.5

CARMIL3-202, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 5

Gene CARMIL3, Length 4,319 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-202ENST00000559694 MAGED1Q9Y5V3 778 aaPredicted RBP10.03□□□□□ -0.8
CARMIL3-202ENST00000559694 LRRC37A2A6NM11 1700 aa10.03□□□□□ -0.8
CARMIL3-202ENST00000559694 ARID1BQ8NFD5 2236 aaPredicted RBP10.03□□□□□ -0.8
CARMIL3-202ENST00000559694 SIGLEC6O43699 453 aa10.03□□□□□ -0.8
CARMIL3-202ENST00000559694 GLB1P16278 677 aa10.03□□□□□ -0.8
CARMIL3-202ENST00000559694 HNRNPFP52597 415 aaKnown RBP10.03□□□□□ -0.8
CARMIL3-202ENST00000559694 ZP2Q05996 745 aa10.03□□□□□ -0.8
CARMIL3-202ENST00000559694 E2F2Q14209 437 aa10.03□□□□□ -0.8
CARMIL3-202ENST00000559694 NHSL2Q5HYW2 709 aa10.03□□□□□ -0.8
CARMIL3-202ENST00000559694 DESI1Q6ICB0 168 aa10.03□□□□□ -0.8
CARMIL3-202ENST00000559694 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.03□□□□□ -0.8
CARMIL3-202ENST00000559694 OR8J3Q8NGG0 315 aa10.03□□□□□ -0.8
CARMIL3-202ENST00000559694 OR4C6Q8NH72 309 aa10.03□□□□□ -0.8
CARMIL3-202ENST00000559694 DNAJA3Q96EY1 480 aa10.03□□□□□ -0.8
CARMIL3-202ENST00000559694 CRELD1Q96HD1 420 aa10.03□□□□□ -0.8
CARMIL3-202ENST00000559694 GMPR2Q9P2T1 348 aaKnown RBP10.03□□□□□ -0.8
CARMIL3-202ENST00000559694 BAIAP2Q9UQB8 552 aa10.03□□□□□ -0.8
CARMIL3-202ENST00000559694 PCDHGB5Q9Y5G0 923 aa10.03□□□□□ -0.8
CARMIL3-202ENST00000559694 PCDHGA8Q9Y5G5 932 aa10.03□□□□□ -0.8
CARMIL3-202ENST00000559694 EEDO75530 441 aaKnown RBP10.03□□□□□ -0.8
CARMIL3-202ENST00000559694 GPR75O95800 540 aa10.03□□□□□ -0.8
CARMIL3-202ENST00000559694 NME1P15531 152 aaKnown RBP10.03□□□□□ -0.8
CARMIL3-202ENST00000559694 STAT5AP42229 794 aa10.03□□□□□ -0.8
CARMIL3-202ENST00000559694 GFERP55789 205 aa10.03□□□□□ -0.8
CARMIL3-202ENST00000559694 CBLBQ13191 982 aa10.03□□□□□ -0.8
CARMIL3-202ENST00000559694 FZD2Q14332 565 aa10.03□□□□□ -0.8
CARMIL3-202ENST00000559694 PAGE3Q5JUK9 113 aa10.03□□□□□ -0.8
CARMIL3-202ENST00000559694 LGI4Q8N135 537 aa10.03□□□□□ -0.8
CARMIL3-202ENST00000559694 SLC22A8Q8TCC7 542 aa10.03□□□□□ -0.8
CARMIL3-202ENST00000559694 ASB12Q8WXK4 309 aa10.03□□□□□ -0.8
CARMIL3-202ENST00000559694 MAL2Q969L2 176 aa10.03□□□□□ -0.8
CARMIL3-202ENST00000559694 BARD1Q99728 777 aaKnown RBP10.03□□□□□ -0.8
CARMIL3-202ENST00000559694 MAPKAP1Q9BPZ7 522 aa10.03□□□□□ -0.8
CARMIL3-202ENST00000559694 C19orf43Q9BQ61 176 aa10.03□□□□□ -0.8
CARMIL3-202ENST00000559694 IFT27Q9BW83 186 aa10.03□□□□□ -0.8
CARMIL3-202ENST00000559694 PCDHB14Q9Y5E9 798 aa10.03□□□□□ -0.8
CARMIL3-202ENST00000559694 CROCCQ5TZA2 2017 aa10.03□□□□□ -0.8
CARMIL3-202ENST00000559694 FOXE1O00358 373 aaPredicted RBP10.03□□□□□ -0.8
CARMIL3-202ENST00000559694 TLX3O43711 291 aaPredicted RBP10.03□□□□□ -0.8
CARMIL3-202ENST00000559694 ZNF821O75541 412 aaPredicted RBP10.03□□□□□ -0.8
CARMIL3-202ENST00000559694 PTTG1O95997 202 aa10.03□□□□□ -0.8
CARMIL3-202ENST00000559694 CD40LGP29965 261 aa10.03□□□□□ -0.8
CARMIL3-202ENST00000559694 TRIM23P36406 574 aa10.03□□□□□ -0.8
CARMIL3-202ENST00000559694 BCL6P41182 706 aa10.03□□□□□ -0.8
CARMIL3-202ENST00000559694 PCDH1Q08174 1060 aa10.03□□□□□ -0.8
CARMIL3-202ENST00000559694 RBBP4Q09028 425 aa10.03□□□□□ -0.8
CARMIL3-202ENST00000559694 ST3GAL3Q11203 375 aa10.03□□□□□ -0.8
CARMIL3-202ENST00000559694 HSDL2Q6YN16 418 aa10.03□□□□□ -0.8
CARMIL3-202ENST00000559694 Q6ZSR9 355 aa10.03□□□□□ -0.8
CARMIL3-202ENST00000559694 HS3ST5Q8IZT8 346 aa10.03□□□□□ -0.8
CARMIL3-202ENST00000559694 METTL4Q8N3J2 472 aa10.03□□□□□ -0.8
CARMIL3-202ENST00000559694 ISL2Q96A47 359 aa10.03□□□□□ -0.8
CARMIL3-202ENST00000559694 ALPK1Q96QP1 1244 aa10.03□□□□□ -0.8
CARMIL3-202ENST00000559694 OR51V1Q9H2C8 321 aa10.03□□□□□ -0.8
CARMIL3-202ENST00000559694 FSCN3Q9NQT6 498 aa10.03□□□□□ -0.8
CARMIL3-202ENST00000559694 NFKBIL1Q9UBC1 381 aaPredicted RBP10.03□□□□□ -0.8
CARMIL3-202ENST00000559694 ICKQ9UPZ9 632 aa10.03□□□□□ -0.8
CARMIL3-202ENST00000559694 ZNF236Q9UL36 1845 aa10.03□□□□□ -0.8
CARMIL3-202ENST00000559694 C2orf92A0A1B0GVN3 265 aa10.02□□□□□ -0.8
CARMIL3-202ENST00000559694 A0A1W2PRG6 482 aa10.02□□□□□ -0.8
CARMIL3-202ENST00000559694 RIIAD1A6NNX1 92 aa10.02□□□□□ -0.8
CARMIL3-202ENST00000559694 SOX1O00570 391 aaPredicted RBP10.02□□□□□ -0.8
CARMIL3-202ENST00000559694 ARHGAP33O14559 1287 aa10.02□□□□□ -0.8
CARMIL3-202ENST00000559694 UBFD1O14562 309 aaKnown RBP10.02□□□□□ -0.8
CARMIL3-202ENST00000559694 BRINP1O60477 761 aa10.02□□□□□ -0.8
CARMIL3-202ENST00000559694 PDGFBP01127 241 aaPredicted RBP10.02□□□□□ -0.8
CARMIL3-202ENST00000559694 HMGN2P05204 90 aaKnown RBP10.02□□□□□ -0.8
CARMIL3-202ENST00000559694 MYL9P24844 172 aa10.02□□□□□ -0.8
CARMIL3-202ENST00000559694 ZNF41P51814 821 aaPredicted RBP10.02□□□□□ -0.8
CARMIL3-202ENST00000559694 DCDP81605 110 aaKnown RBP10.02□□□□□ -0.8
CARMIL3-202ENST00000559694 MAB21L1Q13394 359 aa10.02□□□□□ -0.8
CARMIL3-202ENST00000559694 CLEC12AQ5QGZ9 265 aa10.02□□□□□ -0.8
CARMIL3-202ENST00000559694 ENPP6Q6UWR7 440 aa10.02□□□□□ -0.8
CARMIL3-202ENST00000559694 PRR22Q8IZ63 422 aa10.02□□□□□ -0.8
CARMIL3-202ENST00000559694 ZNF675Q8TD23 568 aa10.02□□□□□ -0.8
CARMIL3-202ENST00000559694 LINC00615Q96LM1 132 aaPredicted RBP10.02□□□□□ -0.8
CARMIL3-202ENST00000559694 MS4A8Q9BY19 250 aa10.02□□□□□ -0.8
CARMIL3-202ENST00000559694 MCUBQ9NWR8 336 aa10.02□□□□□ -0.8
CARMIL3-202ENST00000559694 SPIN1Q9Y657 262 aaPredicted RBP10.02□□□□□ -0.8
CARMIL3-202ENST00000559694 SMIM30A4D0T7 59 aa10.02□□□□□ -0.81
CARMIL3-202ENST00000559694 C4orf47A7E2U8 309 aa10.02□□□□□ -0.81
CARMIL3-202ENST00000559694 ZNF749O43361 778 aa10.02□□□□□ -0.81
CARMIL3-202ENST00000559694 PRAMEF2O60811 474 aa10.02□□□□□ -0.81
CARMIL3-202ENST00000559694 UPK1BO75841 260 aa10.02□□□□□ -0.81
CARMIL3-202ENST00000559694 NOVA1P51513 510 aaKnown RBP10.02□□□□□ -0.81
CARMIL3-202ENST00000559694 SNTA1Q13424 505 aa10.02□□□□□ -0.81
CARMIL3-202ENST00000559694 PHC2Q8IXK0 858 aa10.02□□□□□ -0.81
CARMIL3-202ENST00000559694 OR52P1PQ8NH57 321 aa10.02□□□□□ -0.81
CARMIL3-202ENST00000559694 METTL2AQ96IZ6 378 aaKnown RBP10.02□□□□□ -0.81
CARMIL3-202ENST00000559694 DCBLD2Q96PD2 775 aa10.02□□□□□ -0.81
CARMIL3-202ENST00000559694 IER2Q9BTL4 223 aa10.02□□□□□ -0.81
CARMIL3-202ENST00000559694 GPN2Q9H9Y4 310 aaPredicted RBP10.02□□□□□ -0.81
CARMIL3-202ENST00000559694 MYNNQ9NPC7 610 aa10.02□□□□□ -0.81
CARMIL3-202ENST00000559694 DKKL1Q9UK85 242 aa10.02□□□□□ -0.81
CARMIL3-202ENST00000559694 C12orf71A8MTZ7 269 aa10.02□□□□□ -0.81
CARMIL3-202ENST00000559694 NRG2O14511 850 aaPredicted RBP10.02□□□□□ -0.81
CARMIL3-202ENST00000559694 HCN1O60741 890 aa10.02□□□□□ -0.81
CARMIL3-202ENST00000559694 MITFO75030 526 aaPredicted RBP10.02□□□□□ -0.81
CARMIL3-202ENST00000559694 AHSA1O95433 338 aa10.02□□□□□ -0.81
CARMIL3-202ENST00000559694 HTR2BP41595 481 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms