RNA–Protein interactions for RNA: ENST00000559496.5

ZEB1-216, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 1,381 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-216ENST00000559496 HBEGFQ99075 208 aa6.59□□□□□ -1.35
ZEB1-216ENST00000559496 NRTNQ99748 197 aa6.59□□□□□ -1.35
ZEB1-216ENST00000559496 EFCAB11Q9BUY7 163 aa6.59□□□□□ -1.35
ZEB1-216ENST00000559496 TRIM8Q9BZR9 551 aa6.59□□□□□ -1.35
ZEB1-216ENST00000559496 PCBD2Q9H0N5 130 aa6.59□□□□□ -1.35
ZEB1-216ENST00000559496 ELOVL6Q9H5J4 265 aa6.59□□□□□ -1.35
ZEB1-216ENST00000559496 NIPAL2Q9H841 368 aa6.59□□□□□ -1.35
ZEB1-216ENST00000559496 COQ10BQ9H8M1 238 aa6.59□□□□□ -1.35
ZEB1-216ENST00000559496 SLC35C2Q9NQQ7 365 aa6.59□□□□□ -1.35
ZEB1-216ENST00000559496 NECTIN3Q9NQS3 549 aa6.59□□□□□ -1.35
ZEB1-216ENST00000559496 POT1Q9NUX5 634 aa6.59□□□□□ -1.35
ZEB1-216ENST00000559496 EHD3Q9NZN3 535 aa6.59□□□□□ -1.35
ZEB1-216ENST00000559496 SPASTQ9UBP0 616 aa6.59□□□□□ -1.35
ZEB1-216ENST00000559496 TAC3Q9UHF0 121 aa6.59□□□□□ -1.35
ZEB1-216ENST00000559496 FBXO4Q9UKT5 387 aa6.59□□□□□ -1.35
ZEB1-216ENST00000559496 ZNF490Q9ULM2 529 aaPredicted RBP6.59□□□□□ -1.35
ZEB1-216ENST00000559496 ICKQ9UPZ9 632 aa6.59□□□□□ -1.35
ZEB1-216ENST00000559496 SH2B3Q9UQQ2 575 aa6.59□□□□□ -1.35
ZEB1-216ENST00000559496 A3GALT2U3KPV4 340 aa6.59□□□□□ -1.35
ZEB1-216ENST00000559496 NCOR1O75376 2440 aa6.59□□□□□ -1.35
ZEB1-216ENST00000559496 ZDBF2Q9HCK1 2354 aa6.59□□□□□ -1.35
ZEB1-216ENST00000559496 KNL1Q8NG31 2342 aa6.59□□□□□ -1.35
ZEB1-216ENST00000559496 SDK1Q7Z5N4 2213 aa6.59□□□□□ -1.35
ZEB1-216ENST00000559496 PCM1Q15154 2024 aa6.59□□□□□ -1.36
ZEB1-216ENST00000559496 A0A1B0GVT2 93 aa6.58□□□□□ -1.36
ZEB1-216ENST00000559496 A0A1W2PPV9 198 aa6.58□□□□□ -1.36
ZEB1-216ENST00000559496 B4DGG1 531 aa6.58□□□□□ -1.36
ZEB1-216ENST00000559496 ANGPT2O15123 496 aa6.58□□□□□ -1.36
ZEB1-216ENST00000559496 RGS14O43566 566 aa6.58□□□□□ -1.36
ZEB1-216ENST00000559496 GMDSO60547 372 aa6.58□□□□□ -1.36
ZEB1-216ENST00000559496 TSC22D2O75157 780 aa6.58□□□□□ -1.36
ZEB1-216ENST00000559496 TRIM3O75382 744 aaPredicted RBP6.58□□□□□ -1.36
ZEB1-216ENST00000559496 PDYNP01213 254 aa6.58□□□□□ -1.36
ZEB1-216ENST00000559496 SLPIP03973 132 aa6.58□□□□□ -1.36
ZEB1-216ENST00000559496 HOXD4P09016 255 aaPredicted RBP6.58□□□□□ -1.36
ZEB1-216ENST00000559496 JMJD7P0C870 316 aa6.58□□□□□ -1.36
ZEB1-216ENST00000559496 C1GALT1C1LP0DN25 315 aa6.58□□□□□ -1.36
ZEB1-216ENST00000559496 XRCC1P18887 633 aaPredicted RBP6.58□□□□□ -1.36
ZEB1-216ENST00000559496 CD22P20273 847 aa6.58□□□□□ -1.36
ZEB1-216ENST00000559496 MATN1P21941 496 aa6.58□□□□□ -1.36
ZEB1-216ENST00000559496 ME2P23368 584 aa6.58□□□□□ -1.36
ZEB1-216ENST00000559496 PSMB5P28074 263 aa6.58□□□□□ -1.36
ZEB1-216ENST00000559496 UQCRC1P31930 480 aa6.58□□□□□ -1.36
ZEB1-216ENST00000559496 CASP2P42575 452 aa6.58□□□□□ -1.36
ZEB1-216ENST00000559496 STARP49675 285 aa6.58□□□□□ -1.36
ZEB1-216ENST00000559496 ARHGDIAP52565 204 aa6.58□□□□□ -1.36
ZEB1-216ENST00000559496 OR2B6P58173 313 aa6.58□□□□□ -1.36
ZEB1-216ENST00000559496 HNRNPKP61978 463 aaKnown RBP eCLIP6.58□□□□□ -1.36
ZEB1-216ENST00000559496 UBE2IP63279 158 aaKnown RBP6.58□□□□□ -1.36
ZEB1-216ENST00000559496 MRPS22P82650 360 aaKnown RBP6.58□□□□□ -1.36
ZEB1-216ENST00000559496 TNK1Q13470 666 aa6.58□□□□□ -1.36
ZEB1-216ENST00000559496 ABRAXAS2Q15018 415 aa6.58□□□□□ -1.36
ZEB1-216ENST00000559496 PLK5Q496M5 336 aa6.58□□□□□ -1.36
ZEB1-216ENST00000559496 GTDC1Q4AE62 458 aa6.58□□□□□ -1.36
ZEB1-216ENST00000559496 ATP6AP1LQ52LC2 224 aa6.58□□□□□ -1.36
ZEB1-216ENST00000559496 FAM76BQ5HYJ3 339 aa6.58□□□□□ -1.36
ZEB1-216ENST00000559496 PAGE2BQ5JRK9 111 aa6.58□□□□□ -1.36
ZEB1-216ENST00000559496 CCNYL2Q5T2Q4 361 aa6.58□□□□□ -1.36
ZEB1-216ENST00000559496 FRG2Q64ET8 278 aa6.58□□□□□ -1.36
ZEB1-216ENST00000559496 ATG9BQ674R7 924 aa6.58□□□□□ -1.36
ZEB1-216ENST00000559496 HIST2H2AA3Q6FI13 130 aa6.58□□□□□ -1.36
ZEB1-216ENST00000559496 MED27Q6P2C8 311 aa6.58□□□□□ -1.36
ZEB1-216ENST00000559496 TMEM65Q6PI78 240 aa6.58□□□□□ -1.36
ZEB1-216ENST00000559496 ISLR2Q6UXK2 745 aa6.58□□□□□ -1.36
ZEB1-216ENST00000559496 RNF165Q6ZSG1 346 aa6.58□□□□□ -1.36
ZEB1-216ENST00000559496 SPATA19Q7Z5L4 167 aa6.58□□□□□ -1.36
ZEB1-216ENST00000559496 SLC9B2Q86UD5 537 aa6.58□□□□□ -1.36
ZEB1-216ENST00000559496 AMIGO1Q86WK6 493 aa6.58□□□□□ -1.36
ZEB1-216ENST00000559496 GKN2Q86XP6 184 aa6.58□□□□□ -1.36
ZEB1-216ENST00000559496 GPALPP1Q8IXQ4 340 aa6.58□□□□□ -1.36
ZEB1-216ENST00000559496 EID3Q8N140 333 aa6.58□□□□□ -1.36
ZEB1-216ENST00000559496 ZNF808Q8N4W9 903 aaPredicted RBP6.58□□□□□ -1.36
ZEB1-216ENST00000559496 ZNF565Q8N9K5 539 aa6.58□□□□□ -1.36
ZEB1-216ENST00000559496 POC5Q8NA72 575 aa6.58□□□□□ -1.36
ZEB1-216ENST00000559496 LINC01555Q8NAE3 123 aa6.58□□□□□ -1.36
ZEB1-216ENST00000559496 ZNF548Q8NEK5 533 aaPredicted RBP6.58□□□□□ -1.36
ZEB1-216ENST00000559496 OR4E2Q8NGC2 313 aa6.58□□□□□ -1.36
ZEB1-216ENST00000559496 OR2T11Q8NH01 316 aa6.58□□□□□ -1.36
ZEB1-216ENST00000559496 SLC37A2Q8TED4 501 aa6.58□□□□□ -1.36
ZEB1-216ENST00000559496 ZFP90Q8TF47 636 aa6.58□□□□□ -1.36
ZEB1-216ENST00000559496 PATE1Q8WXA2 126 aa6.58□□□□□ -1.36
ZEB1-216ENST00000559496 USP7Q93009 1102 aa6.58□□□□□ -1.36
ZEB1-216ENST00000559496 YIPF5Q969M3 257 aa6.58□□□□□ -1.36
ZEB1-216ENST00000559496 REPS1Q96D71 796 aa6.58□□□□□ -1.36
ZEB1-216ENST00000559496 MTFMTQ96DP5 389 aaKnown RBP6.58□□□□□ -1.36
ZEB1-216ENST00000559496 WDR34Q96EX3 536 aa6.58□□□□□ -1.36
ZEB1-216ENST00000559496 PPP3R2Q96LZ3 170 aa6.58□□□□□ -1.36
ZEB1-216ENST00000559496 FRG2BQ96QU4 278 aa6.58□□□□□ -1.36
ZEB1-216ENST00000559496 PELOQ9BRX2 385 aaKnown RBP6.58□□□□□ -1.36
ZEB1-216ENST00000559496 NAA50Q9GZZ1 169 aaKnown RBP6.58□□□□□ -1.36
ZEB1-216ENST00000559496 SRMSQ9H3Y6 488 aa6.58□□□□□ -1.36
ZEB1-216ENST00000559496 ZNF385DQ9H6B1 395 aa6.58□□□□□ -1.36
ZEB1-216ENST00000559496 PELI2Q9HAT8 420 aa6.58□□□□□ -1.36
ZEB1-216ENST00000559496 ING3Q9NXR8 418 aa6.58□□□□□ -1.36
ZEB1-216ENST00000559496 OR6C2Q9NZP2 312 aa6.58□□□□□ -1.36
ZEB1-216ENST00000559496 KCMF1Q9P0J7 381 aa6.58□□□□□ -1.36
ZEB1-216ENST00000559496 CPNE7Q9UBL6 633 aa6.58□□□□□ -1.36
ZEB1-216ENST00000559496 GIMAP2Q9UG22 337 aa6.58□□□□□ -1.36
ZEB1-216ENST00000559496 MAGEL2Q9UJ55 1249 aa6.58□□□□□ -1.36
ZEB1-216ENST00000559496 TINAGQ9UJW2 476 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms