RNA–Protein interactions for RNA: ENST00000559389.1

SNX1-206, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 753 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-206ENST00000559389 FAM91A1Q658Y4 838 aa19.91■□□□□ 0.78
SNX1-206ENST00000559389 TMEM81Q6P7N7 255 aa19.91■□□□□ 0.78
SNX1-206ENST00000559389 FIGNL1Q6PIW4 674 aa19.91■□□□□ 0.78
SNX1-206ENST00000559389 POU5F2Q8N7G0 328 aa19.91■□□□□ 0.78
SNX1-206ENST00000559389 CHDHQ8NE62 594 aaPredicted RBP19.91■□□□□ 0.78
SNX1-206ENST00000559389 BCAS4Q8TDM0 211 aa19.91■□□□□ 0.78
SNX1-206ENST00000559389 RAB8BQ92930 207 aa19.91■□□□□ 0.78
SNX1-206ENST00000559389 LRRC37BQ96QE4 947 aa19.91■□□□□ 0.78
SNX1-206ENST00000559389 NODALQ96S42 347 aa19.91■□□□□ 0.78
SNX1-206ENST00000559389 CPPED1Q9BRF8 314 aaPredicted RBP19.91■□□□□ 0.78
SNX1-206ENST00000559389 DEPPQ9NTK1 212 aa19.91■□□□□ 0.78
SNX1-206ENST00000559389 PCDHGB3Q9Y5G1 929 aa19.91■□□□□ 0.78
SNX1-206ENST00000559389 A0A0G2JMM0 328 aa19.9■□□□□ 0.78
SNX1-206ENST00000559389 LOC100653049A0A140TA62 436 aa19.9■□□□□ 0.78
SNX1-206ENST00000559389 A0A1W2PPB8 328 aa19.9■□□□□ 0.78
SNX1-206ENST00000559389 A0A1W2PRS3 328 aa19.9■□□□□ 0.78
SNX1-206ENST00000559389 KIR3DP1A8MWS1 328 aa19.9■□□□□ 0.78
SNX1-206ENST00000559389 FXYD1O00168 92 aa19.9■□□□□ 0.78
SNX1-206ENST00000559389 CLIC1O00299 241 aa19.9■□□□□ 0.78
SNX1-206ENST00000559389 HMGN4O00479 90 aa19.9■□□□□ 0.78
SNX1-206ENST00000559389 KRT34O76011 436 aa19.9■□□□□ 0.78
SNX1-206ENST00000559389 UNC5CO95185 931 aa19.9■□□□□ 0.78
SNX1-206ENST00000559389 AK1P00568 194 aa19.9■□□□□ 0.78
SNX1-206ENST00000559389 P04436 131 aa19.9■□□□□ 0.78
SNX1-206ENST00000559389 OR12D1P0DN82 309 aa19.9■□□□□ 0.78
SNX1-206ENST00000559389 COX4I1P13073 169 aa19.9■□□□□ 0.78
SNX1-206ENST00000559389 PPIBP23284 216 aaKnown RBP19.9■□□□□ 0.78
SNX1-206ENST00000559389 RFX3P48380 749 aa19.9■□□□□ 0.78
SNX1-206ENST00000559389 FUT5Q11128 374 aa19.9■□□□□ 0.78
SNX1-206ENST00000559389 STX5Q13190 355 aa19.9■□□□□ 0.78
SNX1-206ENST00000559389 MMEL1Q495T6 779 aa19.9■□□□□ 0.78
SNX1-206ENST00000559389 DDX59Q5T1V6 619 aaKnown RBP eCLIP19.9■□□□□ 0.78
SNX1-206ENST00000559389 PRAMEF20Q5VT98 475 aa19.9■□□□□ 0.78
SNX1-206ENST00000559389 HEPHL1Q6MZM0 1159 aa19.9■□□□□ 0.78
SNX1-206ENST00000559389 MTERF4Q7Z6M4 381 aaKnown RBP19.9■□□□□ 0.78
SNX1-206ENST00000559389 RNF138Q8WVD3 245 aa19.9■□□□□ 0.78
SNX1-206ENST00000559389 CGREF1Q99674 301 aa19.9■□□□□ 0.78
SNX1-206ENST00000559389 EXD2Q9NVH0 621 aa19.9■□□□□ 0.78
SNX1-206ENST00000559389 NIPSNAP3AQ9UFN0 247 aaPredicted RBP19.9■□□□□ 0.78
SNX1-206ENST00000559389 RALYQ9UKM9 306 aaKnown RBP19.9■□□□□ 0.78
SNX1-206ENST00000559389 ANKRD33BA6NCL7 494 aa19.89■□□□□ 0.77
SNX1-206ENST00000559389 HS6ST1O60243 411 aa19.89■□□□□ 0.77
SNX1-206ENST00000559389 ICOSLGO75144 302 aa19.89■□□□□ 0.77
SNX1-206ENST00000559389 C1QL1O75973 258 aa19.89■□□□□ 0.77
SNX1-206ENST00000559389 PRB1P04280 392 aa19.89■□□□□ 0.77
SNX1-206ENST00000559389 PRDX6P30041 224 aa19.89■□□□□ 0.77
SNX1-206ENST00000559389 LCN1P31025 176 aa19.89■□□□□ 0.77
SNX1-206ENST00000559389 GPR85P60893 370 aa19.89■□□□□ 0.77
SNX1-206ENST00000559389 TBCELQ5QJ74 424 aa19.89■□□□□ 0.77
SNX1-206ENST00000559389 ZAR1Q86SH2 424 aa19.89■□□□□ 0.77
SNX1-206ENST00000559389 GALNT10Q86SR1 603 aa19.89■□□□□ 0.77
SNX1-206ENST00000559389 SULF2Q8IWU5 870 aa19.89■□□□□ 0.77
SNX1-206ENST00000559389 NTNG2Q96CW9 530 aa19.89■□□□□ 0.77
SNX1-206ENST00000559389 RCN3Q96D15 328 aa19.89■□□□□ 0.77
SNX1-206ENST00000559389 TMCO6Q96DC7 493 aa19.89■□□□□ 0.77
SNX1-206ENST00000559389 G6PC3Q9BUM1 346 aa19.89■□□□□ 0.77
SNX1-206ENST00000559389 RAD21L1Q9H4I0 556 aa19.89■□□□□ 0.77
SNX1-206ENST00000559389 IKZF5Q9H5V7 419 aa19.89■□□□□ 0.77
SNX1-206ENST00000559389 IL1RL2Q9HB29 575 aa19.89■□□□□ 0.77
SNX1-206ENST00000559389 PROK2Q9HC23 129 aa19.89■□□□□ 0.77
SNX1-206ENST00000559389 FLRT3Q9NZU0 649 aa19.89■□□□□ 0.77
SNX1-206ENST00000559389 ATRXP46100 2492 aa19.88■□□□□ 0.77
SNX1-206ENST00000559389 PRAMEF25A6NGN4 478 aa19.88■□□□□ 0.77
SNX1-206ENST00000559389 G3V3Y1 287 aa19.88■□□□□ 0.77
SNX1-206ENST00000559389 PEX1O43933 1283 aa19.88■□□□□ 0.77
SNX1-206ENST00000559389 BMP2P12643 396 aa19.88■□□□□ 0.77
SNX1-206ENST00000559389 ETFAP13804 333 aa19.88■□□□□ 0.77
SNX1-206ENST00000559389 CNR1P21554 472 aa19.88■□□□□ 0.77
SNX1-206ENST00000559389 CASP3P42574 277 aa19.88■□□□□ 0.77
SNX1-206ENST00000559389 FADDQ13158 208 aa19.88■□□□□ 0.77
SNX1-206ENST00000559389 RGNQ15493 299 aa19.88■□□□□ 0.77
SNX1-206ENST00000559389 ARHGAP11BQ3KRB8 267 aa19.88■□□□□ 0.77
SNX1-206ENST00000559389 RUNDC3AQ59EK9 446 aa19.88■□□□□ 0.77
SNX1-206ENST00000559389 ATAD3BQ5T9A4 648 aa19.88■□□□□ 0.77
SNX1-206ENST00000559389 BICRALQ6AI39 1079 aa19.88■□□□□ 0.77
SNX1-206ENST00000559389 C16orf62Q7Z3J2 963 aa19.88■□□□□ 0.77
SNX1-206ENST00000559389 PCYOX1LQ8NBM8 494 aa19.88■□□□□ 0.77
SNX1-206ENST00000559389 FAM98AQ8NCA5 519 aaKnown RBP19.88■□□□□ 0.77
SNX1-206ENST00000559389 OR2M7Q8NG81 312 aa19.88■□□□□ 0.77
SNX1-206ENST00000559389 XAGE5Q8WWM1 108 aa19.88■□□□□ 0.77
SNX1-206ENST00000559389 FRMD6Q96NE9 622 aa19.88■□□□□ 0.77
SNX1-206ENST00000559389 ANKRD27Q96NW4 1050 aa19.88■□□□□ 0.77
SNX1-206ENST00000559389 FAM173AQ9BQD7 235 aa19.88■□□□□ 0.77
SNX1-206ENST00000559389 ZNF350Q9GZX5 532 aa19.88■□□□□ 0.77
SNX1-206ENST00000559389 METTL7AQ9H8H3 244 aa19.88■□□□□ 0.77
SNX1-206ENST00000559389 FBXO34Q9NWN3 711 aa19.88■□□□□ 0.77
SNX1-206ENST00000559389 ABCG2Q9UNQ0 655 aa19.88■□□□□ 0.77
SNX1-206ENST00000559389 IGSF10Q6WRI0 2623 aa19.87■□□□□ 0.77
SNX1-206ENST00000559389 KLRC4-KLRK1H3BQV0 150 aa19.87■□□□□ 0.77
SNX1-206ENST00000559389 RASAL1O95294 804 aa19.87■□□□□ 0.77
SNX1-206ENST00000559389 UTS2O95399 124 aa19.87■□□□□ 0.77
SNX1-206ENST00000559389 NPPAP01160 153 aa19.87■□□□□ 0.77
SNX1-206ENST00000559389 ATP6V1C1P21283 382 aa19.87■□□□□ 0.77
SNX1-206ENST00000559389 PTGDSP41222 190 aa19.87■□□□□ 0.77
SNX1-206ENST00000559389 CRATP43155 626 aa19.87■□□□□ 0.77
SNX1-206ENST00000559389 DNASE1L1P49184 302 aa19.87■□□□□ 0.77
SNX1-206ENST00000559389 MEOX1P50221 254 aa19.87■□□□□ 0.77
SNX1-206ENST00000559389 DSTNP60981 165 aa19.87■□□□□ 0.77
SNX1-206ENST00000559389 PMP22Q01453 160 aa19.87■□□□□ 0.77
SNX1-206ENST00000559389 SNTA1Q13424 505 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms