RNA–Protein interactions for RNA: ENST00000559222.5

CASC4-209, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-209ENST00000559222 OLIG3Q7RTU3 272 aa17.1■□□□□ 0.33
CASC4-209ENST00000559222 SLC22A16Q86VW1 577 aa17.1■□□□□ 0.33
CASC4-209ENST00000559222 FAM109AQ8N4B1 249 aa17.1■□□□□ 0.33
CASC4-209ENST00000559222 NATD1Q8N6N6 113 aa17.1■□□□□ 0.33
CASC4-209ENST00000559222 OR5D16Q8NGK9 328 aa17.1■□□□□ 0.33
CASC4-209ENST00000559222 GNRHR2Q96P88 292 aa17.1■□□□□ 0.33
CASC4-209ENST00000559222 SLC6A15Q9H2J7 730 aa17.1■□□□□ 0.33
CASC4-209ENST00000559222 NEUROD4Q9HD90 331 aa17.1■□□□□ 0.33
CASC4-209ENST00000559222 MED4Q9NPJ6 270 aa17.1■□□□□ 0.33
CASC4-209ENST00000559222 PLSCR2Q9NRY7 297 aa17.1■□□□□ 0.33
CASC4-209ENST00000559222 SLC6A13Q9NSD5 602 aa17.1■□□□□ 0.33
CASC4-209ENST00000559222 KLRF1Q9NZS2 232 aa17.1■□□□□ 0.33
CASC4-209ENST00000559222 DCTN4Q9UJW0 460 aa17.1■□□□□ 0.33
CASC4-209ENST00000559222 TINAGQ9UJW2 476 aa17.1■□□□□ 0.33
CASC4-209ENST00000559222 BOKQ9UMX3 212 aaPredicted RBP17.1■□□□□ 0.33
CASC4-209ENST00000559222 POLEQ07864 2286 aa17.1■□□□□ 0.33
CASC4-209ENST00000559222 DNAJC13O75165 2243 aa17.09■□□□□ 0.33
CASC4-209ENST00000559222 PRSS51A0A1B0GVH4 220 aa17.09■□□□□ 0.33
CASC4-209ENST00000559222 SCO2O43819 266 aa17.09■□□□□ 0.33
CASC4-209ENST00000559222 SLC19A2O60779 497 aa17.09■□□□□ 0.33
CASC4-209ENST00000559222 SLC22A3O75751 556 aa17.09■□□□□ 0.33
CASC4-209ENST00000559222 KCNK2O95069 426 aa17.09■□□□□ 0.33
CASC4-209ENST00000559222 PGRP06401 933 aa17.09■□□□□ 0.33
CASC4-209ENST00000559222 ALOX5P09917 674 aa17.09■□□□□ 0.33
CASC4-209ENST00000559222 KRT20P35900 424 aa17.09■□□□□ 0.33
CASC4-209ENST00000559222 TRPC1P48995 793 aa17.09■□□□□ 0.33
CASC4-209ENST00000559222 PRIM2P49643 509 aa17.09■□□□□ 0.33
CASC4-209ENST00000559222 DECR1Q16698 335 aa17.09■□□□□ 0.33
CASC4-209ENST00000559222 GSTA3Q16772 222 aa17.09■□□□□ 0.33
CASC4-209ENST00000559222 GRAMD1BQ3KR37 738 aa17.09■□□□□ 0.33
CASC4-209ENST00000559222 CDC73Q6P1J9 531 aa17.09■□□□□ 0.33
CASC4-209ENST00000559222 TMEM81Q6P7N7 255 aa17.09■□□□□ 0.33
CASC4-209ENST00000559222 DNAJC14Q6Y2X3 702 aaPredicted RBP17.09■□□□□ 0.33
CASC4-209ENST00000559222 GHDCQ8N2G8 530 aa17.09■□□□□ 0.33
CASC4-209ENST00000559222 WDSUB1Q8N9V3 476 aa17.09■□□□□ 0.33
CASC4-209ENST00000559222 OR56A1Q8NGH5 318 aa17.09■□□□□ 0.33
CASC4-209ENST00000559222 TMEM41AQ96HV5 264 aa17.09■□□□□ 0.33
CASC4-209ENST00000559222 CCDC115Q96NT0 180 aa17.09■□□□□ 0.33
CASC4-209ENST00000559222 CCDC28BQ9BUN5 200 aa17.09■□□□□ 0.33
CASC4-209ENST00000559222 SERHLQ9NQF3 203 aa17.09■□□□□ 0.33
CASC4-209ENST00000559222 RYDENQ9NUL5 291 aaKnown RBP17.09■□□□□ 0.33
CASC4-209ENST00000559222 FGFR1OP2Q9NVK5 253 aa17.09■□□□□ 0.33
CASC4-209ENST00000559222 FAM120CQ9NX05 1096 aaKnown RBP17.09■□□□□ 0.33
CASC4-209ENST00000559222 ZIM2Q9NZV7 527 aa17.09■□□□□ 0.33
CASC4-209ENST00000559222 SPRR3Q9UBC9 169 aa17.09■□□□□ 0.33
CASC4-209ENST00000559222 ZNF835Q9Y2P0 537 aa17.09■□□□□ 0.33
CASC4-209ENST00000559222 C15orf41Q9Y2V0 281 aa17.09■□□□□ 0.33
CASC4-209ENST00000559222 RP1L1Q8IWN7 2480 aaPredicted RBP17.08■□□□□ 0.33
CASC4-209ENST00000559222 NPIPA5A0A0B4J1W7 369 aa17.08■□□□□ 0.32
CASC4-209ENST00000559222 CYSRT1A8MQ03 144 aa17.08■□□□□ 0.32
CASC4-209ENST00000559222 NPIPA7E9PJI5 369 aa17.08■□□□□ 0.32
CASC4-209ENST00000559222 SNPHO15079 494 aa17.08■□□□□ 0.32
CASC4-209ENST00000559222 ATP8B1O43520 1251 aa17.08■□□□□ 0.32
CASC4-209ENST00000559222 FADS1O60427 444 aa17.08■□□□□ 0.32
CASC4-209ENST00000559222 UTS2O95399 124 aa17.08■□□□□ 0.32
CASC4-209ENST00000559222 GSNP06396 782 aa17.08■□□□□ 0.32
CASC4-209ENST00000559222 STSP08842 583 aa17.08■□□□□ 0.32
CASC4-209ENST00000559222 NPIPA8P0DM63 369 aa17.08■□□□□ 0.32
CASC4-209ENST00000559222 GDF1P27539 372 aa17.08■□□□□ 0.32
CASC4-209ENST00000559222 PTPN6P29350 595 aa17.08■□□□□ 0.32
CASC4-209ENST00000559222 EVI2BP34910 448 aa17.08■□□□□ 0.32
CASC4-209ENST00000559222 MASP1P48740 699 aa17.08■□□□□ 0.32
CASC4-209ENST00000559222 RNF144AP50876 292 aaPredicted RBP17.08■□□□□ 0.32
CASC4-209ENST00000559222 EFR3AQ14156 821 aa17.08■□□□□ 0.32
CASC4-209ENST00000559222 DPY19L1Q2PZI1 675 aa17.08■□□□□ 0.32
CASC4-209ENST00000559222 GTDC1Q4AE62 458 aa17.08■□□□□ 0.32
CASC4-209ENST00000559222 TIGD2Q4W5G0 525 aa17.08■□□□□ 0.32
CASC4-209ENST00000559222 KRTCAP3Q53RY4 240 aa17.08■□□□□ 0.32
CASC4-209ENST00000559222 TBCELQ5QJ74 424 aa17.08■□□□□ 0.32
CASC4-209ENST00000559222 ANXA8L1Q5VT79 327 aa17.08■□□□□ 0.32
CASC4-209ENST00000559222 OR5M10Q6IEU7 315 aa17.08■□□□□ 0.32
CASC4-209ENST00000559222 APOOLQ6UXV4 268 aa17.08■□□□□ 0.32
CASC4-209ENST00000559222 C3P1Q6ZMU1 363 aa17.08■□□□□ 0.32
CASC4-209ENST00000559222 C6orf120Q7Z4R8 191 aa17.08■□□□□ 0.32
CASC4-209ENST00000559222 FUNDC1Q8IVP5 155 aa17.08■□□□□ 0.32
CASC4-209ENST00000559222 COX18Q8N8Q8 333 aa17.08■□□□□ 0.32
CASC4-209ENST00000559222 FAM110BQ8TC76 370 aa17.08■□□□□ 0.32
CASC4-209ENST00000559222 VPS33AQ96AX1 596 aa17.08■□□□□ 0.32
CASC4-209ENST00000559222 CHMP6Q96FZ7 201 aa17.08■□□□□ 0.32
CASC4-209ENST00000559222 OR7D2Q96RA2 312 aa17.08■□□□□ 0.32
CASC4-209ENST00000559222 OR52E6Q96RD3 313 aa17.08■□□□□ 0.32
CASC4-209ENST00000559222 ACTRT3Q9BYD9 372 aa17.08■□□□□ 0.32
CASC4-209ENST00000559222 UBQLN3Q9H347 655 aa17.08■□□□□ 0.32
CASC4-209ENST00000559222 WIF1Q9Y5W5 379 aa17.08■□□□□ 0.32
CASC4-209ENST00000559222 TRGV8A0A0C4DH27 118 aa17.07■□□□□ 0.32
CASC4-209ENST00000559222 LRRTM2O43300 516 aa17.07■□□□□ 0.32
CASC4-209ENST00000559222 ABCB7O75027 752 aa17.07■□□□□ 0.32
CASC4-209ENST00000559222 SNX4O95219 450 aa17.07■□□□□ 0.32
CASC4-209ENST00000559222 IGHG3P01860 377 aa17.07■□□□□ 0.32
CASC4-209ENST00000559222 RPP38P78345 283 aaKnown RBP17.07■□□□□ 0.32
CASC4-209ENST00000559222 STX5Q13190 355 aa17.07■□□□□ 0.32
CASC4-209ENST00000559222 SAXO2Q658L1 398 aa17.07■□□□□ 0.32
CASC4-209ENST00000559222 TIGD3Q6B0B8 471 aa17.07■□□□□ 0.32
CASC4-209ENST00000559222 SLC30A6Q6NXT4 461 aa17.07■□□□□ 0.32
CASC4-209ENST00000559222 BNC2Q6ZN30 1099 aaPredicted RBP17.07■□□□□ 0.32
CASC4-209ENST00000559222 TRILQ7L0X0 811 aa17.07■□□□□ 0.32
CASC4-209ENST00000559222 MARCH3Q86UD3 253 aa17.07■□□□□ 0.32
CASC4-209ENST00000559222 FJX1Q86VR8 437 aa17.07■□□□□ 0.32
CASC4-209ENST00000559222 MIER2Q8N344 545 aa17.07■□□□□ 0.32
CASC4-209ENST00000559222 FAM26EQ8N5C1 309 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms