RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 FREM3P0C091 2139 aa6.7□□□□□ -1.34
SPG11-213ENST00000558988 A0A087WUV0 522 aaPredicted RBP6.7□□□□□ -1.34
SPG11-213ENST00000558988 A0A0G2JNJ9 132 aa6.7□□□□□ -1.34
SPG11-213ENST00000558988 GOLGA6L10A6NI86 522 aa6.7□□□□□ -1.34
SPG11-213ENST00000558988 A8MT66 165 aa6.7□□□□□ -1.34
SPG11-213ENST00000558988 KDM4EB2RXH2 506 aaPredicted RBP6.7□□□□□ -1.34
SPG11-213ENST00000558988 STX16-NPEPL1H3BU86 382 aa6.7□□□□□ -1.34
SPG11-213ENST00000558988 FOXE1O00358 373 aaPredicted RBP6.7□□□□□ -1.34
SPG11-213ENST00000558988 AQP7O14520 342 aa6.7□□□□□ -1.34
SPG11-213ENST00000558988 STX16O14662 325 aa6.7□□□□□ -1.34
SPG11-213ENST00000558988 NME6O75414 186 aaPredicted RBP6.7□□□□□ -1.34
SPG11-213ENST00000558988 PPM1BO75688 479 aa6.7□□□□□ -1.34
SPG11-213ENST00000558988 SUPT7LO94864 414 aa6.7□□□□□ -1.34
SPG11-213ENST00000558988 OR4F21O95013 312 aa6.7□□□□□ -1.34
SPG11-213ENST00000558988 ZWINTO95229 277 aa6.7□□□□□ -1.34
SPG11-213ENST00000558988 OTCP00480 354 aa6.7□□□□□ -1.34
SPG11-213ENST00000558988 PDYNP01213 254 aa6.7□□□□□ -1.34
SPG11-213ENST00000558988 IGHG3P01860 377 aa6.7□□□□□ -1.34
SPG11-213ENST00000558988 CLPSP04118 112 aa6.7□□□□□ -1.34
SPG11-213ENST00000558988 CTAGE8P0CG41 777 aa6.7□□□□□ -1.34
SPG11-213ENST00000558988 SLC35E2P0CK97 266 aa6.7□□□□□ -1.34
SPG11-213ENST00000558988 CPMP14384 443 aa6.7□□□□□ -1.34
SPG11-213ENST00000558988 POU3F2P20265 443 aaPredicted RBP6.7□□□□□ -1.34
SPG11-213ENST00000558988 FPR2P25090 351 aa6.7□□□□□ -1.34
SPG11-213ENST00000558988 CNTFP26441 200 aa6.7□□□□□ -1.34
SPG11-213ENST00000558988 UQCRC1P31930 480 aa6.7□□□□□ -1.34
SPG11-213ENST00000558988 ZFP36L2P47974 494 aaKnown RBP6.7□□□□□ -1.34
SPG11-213ENST00000558988 SERPINB9P50453 376 aa6.7□□□□□ -1.34
SPG11-213ENST00000558988 AGFG1P52594 562 aaKnown RBP6.7□□□□□ -1.34
SPG11-213ENST00000558988 NRG3P56975 720 aa6.7□□□□□ -1.34
SPG11-213ENST00000558988 RAC3P60763 192 aa6.7□□□□□ -1.34
SPG11-213ENST00000558988 BTKQ06187 659 aa6.7□□□□□ -1.34
SPG11-213ENST00000558988 RPS6KA2Q15349 733 aa6.7□□□□□ -1.34
SPG11-213ENST00000558988 LTB4RQ15722 352 aa6.7□□□□□ -1.34
SPG11-213ENST00000558988 RTL6Q6ICC9 239 aa6.7□□□□□ -1.34
SPG11-213ENST00000558988 SCIMPQ6UWF3 145 aa6.7□□□□□ -1.34
SPG11-213ENST00000558988 PAGE2Q7Z2X7 111 aa6.7□□□□□ -1.34
SPG11-213ENST00000558988 LIX1LQ8IVB5 337 aa6.7□□□□□ -1.34
SPG11-213ENST00000558988 CTAGE4Q8IX94 777 aa6.7□□□□□ -1.34
SPG11-213ENST00000558988 ZZZ3Q8IYH5 903 aa6.7□□□□□ -1.34
SPG11-213ENST00000558988 C1orf52Q8N6N3 182 aaKnown RBP6.7□□□□□ -1.34
SPG11-213ENST00000558988 CDYL2Q8N8U2 506 aa6.7□□□□□ -1.34
SPG11-213ENST00000558988 MNS1Q8NEH6 495 aa6.7□□□□□ -1.34
SPG11-213ENST00000558988 NEIL3Q8TAT5 605 aa6.7□□□□□ -1.34
SPG11-213ENST00000558988 PAQR8Q8TEZ7 354 aa6.7□□□□□ -1.34
SPG11-213ENST00000558988 DCAKDQ8WVC6 231 aa6.7□□□□□ -1.34
SPG11-213ENST00000558988 RILPQ96NA2 401 aa6.7□□□□□ -1.34
SPG11-213ENST00000558988 OR14A2Q96R54 314 aa6.7□□□□□ -1.34
SPG11-213ENST00000558988 EBPLQ9BY08 206 aa6.7□□□□□ -1.34
SPG11-213ENST00000558988 ITPAQ9BY32 194 aa6.7□□□□□ -1.34
SPG11-213ENST00000558988 OR10A5Q9H207 317 aa6.7□□□□□ -1.34
SPG11-213ENST00000558988 MRPL46Q9H2W6 279 aaKnown RBP6.7□□□□□ -1.34
SPG11-213ENST00000558988 METTL7AQ9H8H3 244 aa6.7□□□□□ -1.34
SPG11-213ENST00000558988 CXorf21Q9HAI6 301 aa6.7□□□□□ -1.34
SPG11-213ENST00000558988 AHSPQ9NZD4 102 aa6.7□□□□□ -1.34
SPG11-213ENST00000558988 CNIH4Q9P003 139 aa6.7□□□□□ -1.34
SPG11-213ENST00000558988 Q9UFV3 132 aa6.7□□□□□ -1.34
SPG11-213ENST00000558988 CGGBP1Q9UFW8 167 aaPredicted RBP6.7□□□□□ -1.34
SPG11-213ENST00000558988 NFU1Q9UMS0 254 aa6.7□□□□□ -1.34
SPG11-213ENST00000558988 SNX6Q9UNH7 406 aa6.7□□□□□ -1.34
SPG11-213ENST00000558988 CAMK2AQ9UQM7 478 aa6.7□□□□□ -1.34
SPG11-213ENST00000558988 DTX4Q9Y2E6 619 aa6.7□□□□□ -1.34
SPG11-213ENST00000558988 SLC6A5Q9Y345 797 aa6.7□□□□□ -1.34
SPG11-213ENST00000558988 NPFFR2Q9Y5X5 522 aa6.7□□□□□ -1.34
SPG11-213ENST00000558988 HCFC1P51610 2035 aa6.7□□□□□ -1.34
SPG11-213ENST00000558988 PHF3Q92576 2039 aaKnown RBP6.7□□□□□ -1.34
SPG11-213ENST00000558988 GNG14A0A1W2PPG7 69 aa6.69□□□□□ -1.34
SPG11-213ENST00000558988 CCDC189A1A4V9 331 aa6.69□□□□□ -1.34
SPG11-213ENST00000558988 OR6C76A6NM76 312 aa6.69□□□□□ -1.34
SPG11-213ENST00000558988 CAPN14A8MX76 684 aa6.69□□□□□ -1.34
SPG11-213ENST00000558988 FOXO6A8MYZ6 492 aa6.69□□□□□ -1.34
SPG11-213ENST00000558988 SUSD5O60279 629 aa6.69□□□□□ -1.34
SPG11-213ENST00000558988 HCN1O60741 890 aa6.69□□□□□ -1.34
SPG11-213ENST00000558988 WDR1O75083 606 aa6.69□□□□□ -1.34
SPG11-213ENST00000558988 GUCY1B2O75343 617 aa6.69□□□□□ -1.34
SPG11-213ENST00000558988 SEMA3DO95025 777 aa6.69□□□□□ -1.34
SPG11-213ENST00000558988 RPS17P08708 135 aaKnown RBP6.69□□□□□ -1.34
SPG11-213ENST00000558988 SNRPAP09012 282 aaKnown RBP6.69□□□□□ -1.34
SPG11-213ENST00000558988 RHOXF2BP0C7M4 288 aa6.69□□□□□ -1.34
SPG11-213ENST00000558988 CHN1P15882 459 aa6.69□□□□□ -1.34
SPG11-213ENST00000558988 PORP16435 677 aaPredicted RBP6.69□□□□□ -1.34
SPG11-213ENST00000558988 TAC1P20366 129 aa6.69□□□□□ -1.34
SPG11-213ENST00000558988 GPX3P22352 226 aa6.69□□□□□ -1.34
SPG11-213ENST00000558988 HMOX2P30519 316 aa6.69□□□□□ -1.34
SPG11-213ENST00000558988 TMED10P49755 219 aaKnown RBP6.69□□□□□ -1.34
SPG11-213ENST00000558988 MRPS35P82673 323 aaKnown RBP6.69□□□□□ -1.34
SPG11-213ENST00000558988 SRYQ05066 204 aa6.69□□□□□ -1.34
SPG11-213ENST00000558988 PLCXD2Q0VAA5 305 aa6.69□□□□□ -1.34
SPG11-213ENST00000558988 DUSP8Q13202 625 aa6.69□□□□□ -1.34
SPG11-213ENST00000558988 BIKQ13323 160 aa6.69□□□□□ -1.34
SPG11-213ENST00000558988 NTRK2Q16620 822 aa6.69□□□□□ -1.34
SPG11-213ENST00000558988 EIPR1Q53HC9 387 aa6.69□□□□□ -1.34
SPG11-213ENST00000558988 ANGPTL8Q6UXH0 198 aa6.69□□□□□ -1.34
SPG11-213ENST00000558988 YRDCQ86U90 279 aaKnown RBP6.69□□□□□ -1.34
SPG11-213ENST00000558988 GSPT2Q8IYD1 628 aaKnown RBP6.69□□□□□ -1.34
SPG11-213ENST00000558988 CLYBLQ8N0X4 340 aa6.69□□□□□ -1.34
SPG11-213ENST00000558988 METTL4Q8N3J2 472 aa6.69□□□□□ -1.34
SPG11-213ENST00000558988 MMGT1Q8N4V1 131 aa6.69□□□□□ -1.34
SPG11-213ENST00000558988 SLC15A4Q8N697 577 aa6.69□□□□□ -1.34
SPG11-213ENST00000558988 CCNYL1Q8N7R7 359 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms