RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 IGHV3-13P01766 116 aa3.54□□□□□ -1.84
CASC4-206ENST00000558847 IGFBP1P08833 259 aaPredicted RBP3.54□□□□□ -1.84
CASC4-206ENST00000558847 ANXA3P12429 323 aa3.54□□□□□ -1.84
CASC4-206ENST00000558847 PRG2P13727 222 aa3.54□□□□□ -1.84
CASC4-206ENST00000558847 PVRP15151 417 aa3.54□□□□□ -1.84
CASC4-206ENST00000558847 IGFBP5P24593 272 aa3.54□□□□□ -1.84
CASC4-206ENST00000558847 CYLC1P35663 651 aaPredicted RBP3.54□□□□□ -1.84
CASC4-206ENST00000558847 ETV5P41161 510 aa3.54□□□□□ -1.84
CASC4-206ENST00000558847 ELK3P41970 407 aa3.54□□□□□ -1.84
CASC4-206ENST00000558847 BDH1Q02338 343 aa3.54□□□□□ -1.84
CASC4-206ENST00000558847 PDK4Q16654 411 aa3.54□□□□□ -1.84
CASC4-206ENST00000558847 TMEM44Q2T9K0 475 aa3.54□□□□□ -1.84
CASC4-206ENST00000558847 MEDAGQ5VYS4 303 aa3.54□□□□□ -1.84
CASC4-206ENST00000558847 FAM219BQ5XKK7 198 aa3.54□□□□□ -1.84
CASC4-206ENST00000558847 RFWD3Q6PCD5 774 aa3.54□□□□□ -1.84
CASC4-206ENST00000558847 ZNF497Q6ZNH5 498 aa3.54□□□□□ -1.84
CASC4-206ENST00000558847 ANKRD37Q7Z713 158 aa3.54□□□□□ -1.84
CASC4-206ENST00000558847 ZDHHC21Q8IVQ6 265 aa3.54□□□□□ -1.84
CASC4-206ENST00000558847 ZNF491Q8N8L2 437 aa3.54□□□□□ -1.84
CASC4-206ENST00000558847 FNDC8Q8TC99 324 aa3.54□□□□□ -1.84
CASC4-206ENST00000558847 TOMM40LQ969M1 308 aa3.54□□□□□ -1.84
CASC4-206ENST00000558847 MYLPFQ96A32 169 aa3.54□□□□□ -1.84
CASC4-206ENST00000558847 ADIPOR1Q96A54 375 aa3.54□□□□□ -1.84
CASC4-206ENST00000558847 C11orf24Q96F05 449 aaPredicted RBP3.54□□□□□ -1.84
CASC4-206ENST00000558847 SDSLQ96GA7 329 aa3.54□□□□□ -1.84
CASC4-206ENST00000558847 DHX33Q9H6R0 707 aaKnown RBP3.54□□□□□ -1.84
CASC4-206ENST00000558847 EXOSC3Q9NQT5 275 aaKnown RBP3.54□□□□□ -1.84
CASC4-206ENST00000558847 CRLS1Q9UJA2 301 aa3.54□□□□□ -1.84
CASC4-206ENST00000558847 NTNG1Q9Y2I2 539 aa3.54□□□□□ -1.84
CASC4-206ENST00000558847 OR10H1Q9Y4A9 318 aa3.54□□□□□ -1.84
CASC4-206ENST00000558847 RNF115Q9Y4L5 304 aa3.54□□□□□ -1.84
CASC4-206ENST00000558847 GMPPBQ9Y5P6 360 aa3.54□□□□□ -1.84
CASC4-206ENST00000558847 KLF2Q9Y5W3 355 aaPredicted RBP3.54□□□□□ -1.84
CASC4-206ENST00000558847 A0A1W2PNV4 684 aa3.53□□□□□ -1.84
CASC4-206ENST00000558847 RPL37AP8A6NKH3 93 aa3.53□□□□□ -1.84
CASC4-206ENST00000558847 ZNF487B1APH4 448 aa3.53□□□□□ -1.84
CASC4-206ENST00000558847 GPR89AB7ZAQ6 455 aa3.53□□□□□ -1.84
CASC4-206ENST00000558847 PPIAL4DF5H284 164 aa3.53□□□□□ -1.84
CASC4-206ENST00000558847 CASKO14936 926 aa3.53□□□□□ -1.84
CASC4-206ENST00000558847 LCMT2O60294 686 aaKnown RBP3.53□□□□□ -1.84
CASC4-206ENST00000558847 TRIM3O75382 744 aaPredicted RBP3.53□□□□□ -1.84
CASC4-206ENST00000558847 STX11O75558 287 aa3.53□□□□□ -1.84
CASC4-206ENST00000558847 PRAMEF12O95522 483 aa3.53□□□□□ -1.84
CASC4-206ENST00000558847 GPR89BP0CG08 455 aa3.53□□□□□ -1.84
CASC4-206ENST00000558847 ZNF883P0CG24 379 aa3.53□□□□□ -1.84
CASC4-206ENST00000558847 SDC1P18827 310 aa3.53□□□□□ -1.84
CASC4-206ENST00000558847 CHI3L1P36222 383 aaPredicted RBP3.53□□□□□ -1.84
CASC4-206ENST00000558847 RPS6P62753 249 aaKnown RBP3.53□□□□□ -1.84
CASC4-206ENST00000558847 NTHL1P78549 312 aa3.53□□□□□ -1.84
CASC4-206ENST00000558847 NUCB2P80303 420 aa3.53□□□□□ -1.84
CASC4-206ENST00000558847 SNTB2Q13425 540 aaKnown RBP3.53□□□□□ -1.84
CASC4-206ENST00000558847 MESDQ14696 234 aa3.53□□□□□ -1.84
CASC4-206ENST00000558847 UBE2V2Q15819 145 aa3.53□□□□□ -1.84
CASC4-206ENST00000558847 C17orf58Q2M2W7 97 aa3.53□□□□□ -1.84
CASC4-206ENST00000558847 MS4A13Q5J8X5 152 aa3.53□□□□□ -1.84
CASC4-206ENST00000558847 CFAP157Q5JU67 520 aa3.53□□□□□ -1.84
CASC4-206ENST00000558847 LGSNQ5TDP6 509 aa3.53□□□□□ -1.84
CASC4-206ENST00000558847 SLX4IPQ5VYV7 408 aa3.53□□□□□ -1.84
CASC4-206ENST00000558847 ASPHD2Q6ICH7 369 aa3.53□□□□□ -1.84
CASC4-206ENST00000558847 PNCKQ6P2M8 343 aa3.53□□□□□ -1.84
CASC4-206ENST00000558847 SYT10Q6XYQ8 523 aa3.53□□□□□ -1.84
CASC4-206ENST00000558847 ADAMTSL5Q6ZMM2 481 aa3.53□□□□□ -1.84
CASC4-206ENST00000558847 SLC47A2Q86VL8 602 aa3.53□□□□□ -1.84
CASC4-206ENST00000558847 IFNEQ86WN2 208 aa3.53□□□□□ -1.84
CASC4-206ENST00000558847 TMEM17Q86X19 198 aa3.53□□□□□ -1.84
CASC4-206ENST00000558847 ZSCAN4Q8NAM6 433 aaPredicted RBP3.53□□□□□ -1.84
CASC4-206ENST00000558847 RFESDQ8TAC1 157 aa3.53□□□□□ -1.84
CASC4-206ENST00000558847 RAET1EQ8TD07 263 aa3.53□□□□□ -1.84
CASC4-206ENST00000558847 IL1F10Q8WWZ1 152 aa3.53□□□□□ -1.84
CASC4-206ENST00000558847 DNAJA3Q96EY1 480 aa3.53□□□□□ -1.84
CASC4-206ENST00000558847 ZBED6CLQ96FA7 236 aaPredicted RBP3.53□□□□□ -1.84
CASC4-206ENST00000558847 SENP8Q96LD8 212 aa3.53□□□□□ -1.84
CASC4-206ENST00000558847 VGLL1Q99990 258 aa3.53□□□□□ -1.84
CASC4-206ENST00000558847 CRACR2AQ9BSW2 395 aa3.53□□□□□ -1.84
CASC4-206ENST00000558847 CCDC28BQ9BUN5 200 aa3.53□□□□□ -1.84
CASC4-206ENST00000558847 ALG12Q9BV10 488 aa3.53□□□□□ -1.84
CASC4-206ENST00000558847 RAB33BQ9H082 229 aa3.53□□□□□ -1.84
CASC4-206ENST00000558847 ZBP1Q9H171 429 aa3.53□□□□□ -1.84
CASC4-206ENST00000558847 SLC25A51Q9H1U9 297 aa3.53□□□□□ -1.84
CASC4-206ENST00000558847 ADGRL4Q9HBW9 690 aa3.53□□□□□ -1.84
CASC4-206ENST00000558847 IMPAD1Q9NX62 359 aa3.53□□□□□ -1.84
CASC4-206ENST00000558847 ZNF346Q9UL40 294 aaKnown RBP3.53□□□□□ -1.84
CASC4-206ENST00000558847 ACOD1A6NK06 481 aa3.52□□□□□ -1.85
CASC4-206ENST00000558847 SDHDO14521 159 aa3.52□□□□□ -1.85
CASC4-206ENST00000558847 CTAGE5O15320 804 aa3.52□□□□□ -1.85
CASC4-206ENST00000558847 TPST2O60704 377 aa3.52□□□□□ -1.85
CASC4-206ENST00000558847 KIAA0754O94854 1291 aa3.52□□□□□ -1.85
CASC4-206ENST00000558847 ADCY5O95622 1261 aa3.52□□□□□ -1.85
CASC4-206ENST00000558847 SEMA4FO95754 770 aa3.52□□□□□ -1.85
CASC4-206ENST00000558847 IGHV3-9P01782 118 aa3.52□□□□□ -1.85
CASC4-206ENST00000558847 HOXD4P09016 255 aaPredicted RBP3.52□□□□□ -1.85
CASC4-206ENST00000558847 CLUP10909 449 aa3.52□□□□□ -1.85
CASC4-206ENST00000558847 DRD5P21918 477 aa3.52□□□□□ -1.85
CASC4-206ENST00000558847 DLSTP36957 453 aa3.52□□□□□ -1.85
CASC4-206ENST00000558847 SPIBQ01892 262 aa3.52□□□□□ -1.85
CASC4-206ENST00000558847 ZNF33BQ06732 778 aa3.52□□□□□ -1.85
CASC4-206ENST00000558847 CD300CQ08708 224 aa3.52□□□□□ -1.85
CASC4-206ENST00000558847 CRMP1Q14194 572 aa3.52□□□□□ -1.85
CASC4-206ENST00000558847 ATXN7L3Q14CW9 347 aaPredicted RBP3.52□□□□□ -1.85
CASC4-206ENST00000558847 ABRAXAS2Q15018 415 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms