RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 PIGTQ969N2 578 aa14.39□□□□□ -0.11
SCFD1-224ENST00000557713 PGM2Q96G03 612 aa14.39□□□□□ -0.11
SCFD1-224ENST00000557713 TMEM237Q96Q45 408 aa14.39□□□□□ -0.11
SCFD1-224ENST00000557713 STMN4Q9H169 189 aaPredicted RBP14.39□□□□□ -0.11
SCFD1-224ENST00000557713 OPN3Q9H1Y3 402 aaPredicted RBP14.39□□□□□ -0.11
SCFD1-224ENST00000557713 GIMAP4Q9NUV9 329 aa14.39□□□□□ -0.11
SCFD1-224ENST00000557713 SIRT5Q9NXA8 310 aa14.39□□□□□ -0.11
SCFD1-224ENST00000557713 KLHL28Q9NXS3 571 aa14.39□□□□□ -0.11
SCFD1-224ENST00000557713 ELOVL5Q9NYP7 299 aa14.39□□□□□ -0.11
SCFD1-224ENST00000557713 TMEM216Q9P0N5 145 aa14.39□□□□□ -0.11
SCFD1-224ENST00000557713 PPP4R1LQ9P1A2 415 aa14.39□□□□□ -0.11
SCFD1-224ENST00000557713 ZNF337Q9Y3M9 751 aa14.39□□□□□ -0.11
SCFD1-224ENST00000557713 SERTM1A2A2V5 107 aa14.38□□□□□ -0.11
SCFD1-224ENST00000557713 H0YC42 278 aa14.38□□□□□ -0.11
SCFD1-224ENST00000557713 EMC8O43402 210 aa14.38□□□□□ -0.11
SCFD1-224ENST00000557713 TNFRSF21O75509 655 aa14.38□□□□□ -0.11
SCFD1-224ENST00000557713 HEXAP06865 529 aa14.38□□□□□ -0.11
SCFD1-224ENST00000557713 HK1P19367 917 aa14.38□□□□□ -0.11
SCFD1-224ENST00000557713 TAC1P20366 129 aa14.38□□□□□ -0.11
SCFD1-224ENST00000557713 CRYGSP22914 178 aa14.38□□□□□ -0.11
SCFD1-224ENST00000557713 ECHS1P30084 290 aa14.38□□□□□ -0.11
SCFD1-224ENST00000557713 HMOX2P30519 316 aa14.38□□□□□ -0.11
SCFD1-224ENST00000557713 TIA1P31483 386 aaKnown RBP eCLIP14.38□□□□□ -0.11
SCFD1-224ENST00000557713 UGT2B10P36537 528 aa14.38□□□□□ -0.11
SCFD1-224ENST00000557713 TPD52P55327 224 aaPredicted RBP14.38□□□□□ -0.11
SCFD1-224ENST00000557713 EEFSECP57772 596 aaKnown RBP14.38□□□□□ -0.11
SCFD1-224ENST00000557713 ACKR1Q16570 336 aa14.38□□□□□ -0.11
SCFD1-224ENST00000557713 Q5PR19 223 aa14.38□□□□□ -0.11
SCFD1-224ENST00000557713 TIFABQ6ZNK6 161 aa14.38□□□□□ -0.11
SCFD1-224ENST00000557713 P3H2Q8IVL5 708 aa14.38□□□□□ -0.11
SCFD1-224ENST00000557713 MEIOBQ8N635 442 aa14.38□□□□□ -0.11
SCFD1-224ENST00000557713 UHMK1Q8TAS1 419 aaKnown RBP14.38□□□□□ -0.11
SCFD1-224ENST00000557713 MARK4Q96L34 752 aa14.38□□□□□ -0.11
SCFD1-224ENST00000557713 SHCBP1LQ9BZQ2 653 aa14.38□□□□□ -0.11
SCFD1-224ENST00000557713 RTN4RQ9BZR6 473 aa14.38□□□□□ -0.11
SCFD1-224ENST00000557713 ZNF395Q9H8N7 513 aaPredicted RBP14.38□□□□□ -0.11
SCFD1-224ENST00000557713 RNF122Q9H9V4 155 aa14.38□□□□□ -0.11
SCFD1-224ENST00000557713 ZNF226Q9NYT6 803 aa14.38□□□□□ -0.11
SCFD1-224ENST00000557713 MED11Q9P086 117 aa14.38□□□□□ -0.11
SCFD1-224ENST00000557713 OR10H1Q9Y4A9 318 aa14.38□□□□□ -0.11
SCFD1-224ENST00000557713 NSD1Q96L73 2696 aaPredicted RBP14.38□□□□□ -0.11
SCFD1-224ENST00000557713 A0A087WUV0 522 aaPredicted RBP14.37□□□□□ -0.11
SCFD1-224ENST00000557713 A0A087WV62 115 aa14.37□□□□□ -0.11
SCFD1-224ENST00000557713 LINC01387J3KSC0 135 aa14.37□□□□□ -0.11
SCFD1-224ENST00000557713 SCO2O43819 266 aa14.37□□□□□ -0.11
SCFD1-224ENST00000557713 SMPD2O60906 423 aa14.37□□□□□ -0.11
SCFD1-224ENST00000557713 LY6G6DO95868 133 aa14.37□□□□□ -0.11
SCFD1-224ENST00000557713 ANXA4P09525 319 aaPredicted RBP14.37□□□□□ -0.11
SCFD1-224ENST00000557713 CD8BP10966 210 aa14.37□□□□□ -0.11
SCFD1-224ENST00000557713 DDCP20711 480 aa14.37□□□□□ -0.11
SCFD1-224ENST00000557713 ATP5F1P24539 256 aaPredicted RBP14.37□□□□□ -0.11
SCFD1-224ENST00000557713 GCAP28676 217 aa14.37□□□□□ -0.11
SCFD1-224ENST00000557713 CCKARP32238 428 aa14.37□□□□□ -0.11
SCFD1-224ENST00000557713 GSTM5P46439 218 aa14.37□□□□□ -0.11
SCFD1-224ENST00000557713 BTKQ06187 659 aa14.37□□□□□ -0.11
SCFD1-224ENST00000557713 CYP27C1Q4G0S4 372 aa14.37□□□□□ -0.11
SCFD1-224ENST00000557713 PRSS57Q6UWY2 283 aa14.37□□□□□ -0.11
SCFD1-224ENST00000557713 C22orf34Q6ZV56 151 aa14.37□□□□□ -0.11
SCFD1-224ENST00000557713 CIARTQ8N365 385 aaPredicted RBP14.37□□□□□ -0.11
SCFD1-224ENST00000557713 MMGT1Q8N4V1 131 aa14.37□□□□□ -0.11
SCFD1-224ENST00000557713 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.37□□□□□ -0.11
SCFD1-224ENST00000557713 IFT81Q8WYA0 676 aa14.37□□□□□ -0.11
SCFD1-224ENST00000557713 PIK3IP1Q96FE7 263 aa14.37□□□□□ -0.11
SCFD1-224ENST00000557713 COX4I2Q96KJ9 171 aa14.37□□□□□ -0.11
SCFD1-224ENST00000557713 FAM111AQ96PZ2 611 aa14.37□□□□□ -0.11
SCFD1-224ENST00000557713 BBS4Q96RK4 519 aa14.37□□□□□ -0.11
SCFD1-224ENST00000557713 FMO2Q99518 471 aa14.37□□□□□ -0.11
SCFD1-224ENST00000557713 SLC39A3Q9BRY0 314 aa14.37□□□□□ -0.11
SCFD1-224ENST00000557713 EBPLQ9BY08 206 aa14.37□□□□□ -0.11
SCFD1-224ENST00000557713 SDHAF3Q9NRP4 125 aa14.37□□□□□ -0.11
SCFD1-224ENST00000557713 FLRT3Q9NZU0 649 aa14.37□□□□□ -0.11
SCFD1-224ENST00000557713 SENP1Q9P0U3 644 aa14.37□□□□□ -0.11
SCFD1-224ENST00000557713 NFU1Q9UMS0 254 aa14.37□□□□□ -0.11
SCFD1-224ENST00000557713 ABCG2Q9UNQ0 655 aa14.37□□□□□ -0.11
SCFD1-224ENST00000557713 C19orf53Q9UNZ5 99 aaPredicted RBP14.37□□□□□ -0.11
SCFD1-224ENST00000557713 TIMM22Q9Y584 194 aa14.37□□□□□ -0.11
SCFD1-224ENST00000557713 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.37□□□□□ -0.11
SCFD1-224ENST00000557713 OR2M5A3KFT3 312 aa14.36□□□□□ -0.11
SCFD1-224ENST00000557713 FAM171A2A8MVW0 826 aa14.36□□□□□ -0.11
SCFD1-224ENST00000557713 C16orf97H3BN30 126 aa14.36□□□□□ -0.11
SCFD1-224ENST00000557713 COQ9O75208 318 aa14.36□□□□□ -0.11
SCFD1-224ENST00000557713 PSMG1O95456 288 aa14.36□□□□□ -0.11
SCFD1-224ENST00000557713 JUNP05412 331 aaKnown RBP14.36□□□□□ -0.11
SCFD1-224ENST00000557713 POU2F1P14859 743 aa14.36□□□□□ -0.11
SCFD1-224ENST00000557713 FPR1P21462 350 aa14.36□□□□□ -0.11
SCFD1-224ENST00000557713 LOXP28300 417 aaPredicted RBP14.36□□□□□ -0.11
SCFD1-224ENST00000557713 PRKAA2P54646 552 aa14.36□□□□□ -0.11
SCFD1-224ENST00000557713 PKNOX1P55347 436 aa14.36□□□□□ -0.11
SCFD1-224ENST00000557713 CLDN20P56880 219 aa14.36□□□□□ -0.11
SCFD1-224ENST00000557713 OCRLQ01968 901 aa14.36□□□□□ -0.11
SCFD1-224ENST00000557713 C2orf80Q0P641 193 aa14.36□□□□□ -0.11
SCFD1-224ENST00000557713 ZNF155Q12901 538 aaPredicted RBP14.36□□□□□ -0.11
SCFD1-224ENST00000557713 LCP2Q13094 533 aa14.36□□□□□ -0.11
SCFD1-224ENST00000557713 GANABQ14697 944 aaKnown RBP14.36□□□□□ -0.11
SCFD1-224ENST00000557713 GUSBP1Q15486 140 aa14.36□□□□□ -0.11
SCFD1-224ENST00000557713 GLYR1Q49A26 553 aaPredicted RBP14.36□□□□□ -0.11
SCFD1-224ENST00000557713 LGSNQ5TDP6 509 aa14.36□□□□□ -0.11
SCFD1-224ENST00000557713 RAET1LQ5VY80 246 aa14.36□□□□□ -0.11
SCFD1-224ENST00000557713 LCA5Q86VQ0 697 aa14.36□□□□□ -0.11
SCFD1-224ENST00000557713 ZNF610Q8N9Z0 462 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms