RNA–Protein interactions for RNA: ENST00000557548.1

TRAV28-201, Transcript of T cell receptor alpha variable 28 (pseudogene), humanhuman

BASIC

Gene TRAV28, Length 323 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV28-201ENST00000557548 FAM3CQ92520 227 aa2.66□□□□□ -1.98
TRAV28-201ENST00000557548 DLX4Q92988 240 aaPredicted RBP2.66□□□□□ -1.98
TRAV28-201ENST00000557548 C18orf25Q96B23 403 aaPredicted RBP2.66□□□□□ -1.98
TRAV28-201ENST00000557548 ZBTB9Q96C00 473 aa2.66□□□□□ -1.98
TRAV28-201ENST00000557548 BIRC7Q96CA5 298 aa2.66□□□□□ -1.98
TRAV28-201ENST00000557548 RAB3CQ96E17 227 aa2.66□□□□□ -1.98
TRAV28-201ENST00000557548 ZNF396Q96N95 335 aaPredicted RBP2.66□□□□□ -1.98
TRAV28-201ENST00000557548 ALKBH3Q96Q83 286 aaPredicted RBP2.66□□□□□ -1.98
TRAV28-201ENST00000557548 ZNF300Q96RE9 604 aaPredicted RBP2.66□□□□□ -1.98
TRAV28-201ENST00000557548 RIT2Q99578 217 aa2.66□□□□□ -1.98
TRAV28-201ENST00000557548 OMDQ99983 421 aa2.66□□□□□ -1.98
TRAV28-201ENST00000557548 LZTS2Q9BRK4 669 aa2.66□□□□□ -1.98
TRAV28-201ENST00000557548 CCDC94Q9BW85 323 aaPredicted RBP2.66□□□□□ -1.98
TRAV28-201ENST00000557548 GPR174Q9BXC1 333 aa2.66□□□□□ -1.98
TRAV28-201ENST00000557548 CLEC7AQ9BXN2 247 aa2.66□□□□□ -1.98
TRAV28-201ENST00000557548 SLC25A51Q9H1U9 297 aa2.66□□□□□ -1.98
TRAV28-201ENST00000557548 LIME1Q9H400 295 aa2.66□□□□□ -1.98
TRAV28-201ENST00000557548 YY1AP1Q9H869 796 aa2.66□□□□□ -1.98
TRAV28-201ENST00000557548 FANCEQ9HB96 536 aa2.66□□□□□ -1.98
TRAV28-201ENST00000557548 IL1RAPQ9NPH3 570 aa2.66□□□□□ -1.98
TRAV28-201ENST00000557548 SPHK2Q9NRA0 654 aa2.66□□□□□ -1.98
TRAV28-201ENST00000557548 GNG12Q9UBI6 72 aa2.66□□□□□ -1.98
TRAV28-201ENST00000557548 LCMT1Q9UIC8 334 aa2.66□□□□□ -1.98
TRAV28-201ENST00000557548 WDR45Q9Y484 360 aa2.66□□□□□ -1.98
TRAV28-201ENST00000557548 WDR19Q8NEZ3 1342 aa2.66□□□□□ -1.98
TRAV28-201ENST00000557548 THOC2Q8NI27 1593 aaKnown RBP2.66□□□□□ -1.98
TRAV28-201ENST00000557548 IGHV3-20A0A0C4DH32 117 aa2.65□□□□□ -1.99
TRAV28-201ENST00000557548 GOLGA8OA6NCC3 632 aa2.65□□□□□ -1.99
TRAV28-201ENST00000557548 HELTA6NFD8 242 aa2.65□□□□□ -1.99
TRAV28-201ENST00000557548 MFSD2BA6NFX1 497 aa2.65□□□□□ -1.99
TRAV28-201ENST00000557548 ZNF716A6NP11 495 aa2.65□□□□□ -1.99
TRAV28-201ENST00000557548 GOLGA8NF8WBI6 632 aa2.65□□□□□ -1.99
TRAV28-201ENST00000557548 H0YIV9 168 aa2.65□□□□□ -1.99
TRAV28-201ENST00000557548 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP2.65□□□□□ -1.99
TRAV28-201ENST00000557548 STX7O15400 261 aaKnown RBP2.65□□□□□ -1.99
TRAV28-201ENST00000557548 EFNA2O43921 213 aa2.65□□□□□ -1.99
TRAV28-201ENST00000557548 ECI2O75521 394 aa2.65□□□□□ -1.99
TRAV28-201ENST00000557548 NXPH4O95158 308 aa2.65□□□□□ -1.99
TRAV28-201ENST00000557548 YEATS4O95619 227 aa2.65□□□□□ -1.99
TRAV28-201ENST00000557548 S100A9P06702 114 aaKnown RBP2.65□□□□□ -1.99
TRAV28-201ENST00000557548 ASGR1P07306 291 aa2.65□□□□□ -1.99
TRAV28-201ENST00000557548 OR9G9P0C7N8 305 aa2.65□□□□□ -1.99
TRAV28-201ENST00000557548 ZNF735P0CB33 412 aa2.65□□□□□ -1.99
TRAV28-201ENST00000557548 SNHG28P0DPA3 235 aa2.65□□□□□ -1.99
TRAV28-201ENST00000557548 PNMTP11086 282 aa2.65□□□□□ -1.99
TRAV28-201ENST00000557548 TPSB2P20231 275 aa2.65□□□□□ -1.99
TRAV28-201ENST00000557548 CALML3P27482 149 aa2.65□□□□□ -1.99
TRAV28-201ENST00000557548 LAP3P28838 519 aa2.65□□□□□ -1.99
TRAV28-201ENST00000557548 PDHA2P29803 388 aa2.65□□□□□ -1.99
TRAV28-201ENST00000557548 CHRNB4P30926 498 aa2.65□□□□□ -1.99
TRAV28-201ENST00000557548 RFC4P35249 363 aa2.65□□□□□ -1.99
TRAV28-201ENST00000557548 SAA4P35542 130 aa2.65□□□□□ -1.99
TRAV28-201ENST00000557548 TIMP3P35625 211 aa2.65□□□□□ -1.99
TRAV28-201ENST00000557548 CEBPDP49716 269 aaPredicted RBP2.65□□□□□ -1.99
TRAV28-201ENST00000557548 NDST2P52849 883 aa2.65□□□□□ -1.99
TRAV28-201ENST00000557548 VCPP55072 806 aaKnown RBP2.65□□□□□ -1.99
TRAV28-201ENST00000557548 DLX5P56178 289 aa2.65□□□□□ -1.99
TRAV28-201ENST00000557548 KIAA0141Q14154 515 aaPredicted RBP2.65□□□□□ -1.99
TRAV28-201ENST00000557548 EIF2B1Q14232 305 aaKnown RBP2.65□□□□□ -1.99
TRAV28-201ENST00000557548 TPSAB1Q15661 275 aa2.65□□□□□ -1.99
TRAV28-201ENST00000557548 UBE2V2Q15819 145 aa2.65□□□□□ -1.99
TRAV28-201ENST00000557548 CCDC6Q16204 474 aa2.65□□□□□ -1.99
TRAV28-201ENST00000557548 GGTA1PQ4G0N0 100 aa2.65□□□□□ -1.99
TRAV28-201ENST00000557548 FAM76BQ5HYJ3 339 aa2.65□□□□□ -1.99
TRAV28-201ENST00000557548 AGAP7PQ5VUJ5 663 aa2.65□□□□□ -1.99
TRAV28-201ENST00000557548 AADACL4Q5VUY2 407 aa2.65□□□□□ -1.99
TRAV28-201ENST00000557548 SLX4IPQ5VYV7 408 aa2.65□□□□□ -1.99
TRAV28-201ENST00000557548 BHLHB9Q6PI77 547 aa2.65□□□□□ -1.99
TRAV28-201ENST00000557548 BTNL3Q6UXE8 466 aa2.65□□□□□ -1.99
TRAV28-201ENST00000557548 Q6ZPB1 254 aaPredicted RBP2.65□□□□□ -1.99
TRAV28-201ENST00000557548 LANCL3Q6ZV70 420 aa2.65□□□□□ -1.99
TRAV28-201ENST00000557548 KRTAP5-2Q701N4 177 aa2.65□□□□□ -1.99
TRAV28-201ENST00000557548 MOB2Q70IA6 237 aa2.65□□□□□ -1.99
TRAV28-201ENST00000557548 NANOGNBQ7Z5D8 188 aa2.65□□□□□ -1.99
TRAV28-201ENST00000557548 ANKRD37Q7Z713 158 aa2.65□□□□□ -1.99
TRAV28-201ENST00000557548 ACOT1Q86TX2 421 aa2.65□□□□□ -1.99
TRAV28-201ENST00000557548 SPERTQ8NA61 448 aa2.65□□□□□ -1.99
TRAV28-201ENST00000557548 FAM184AQ8NB25 1140 aa2.65□□□□□ -1.99
TRAV28-201ENST00000557548 SYT14Q8NB59 555 aa2.65□□□□□ -1.99
TRAV28-201ENST00000557548 STXBP6Q8NFX7 210 aa2.65□□□□□ -1.99
TRAV28-201ENST00000557548 OR52B6Q8NGF0 335 aa2.65□□□□□ -1.99
TRAV28-201ENST00000557548 LRRC15Q8TF66 581 aa2.65□□□□□ -1.99
TRAV28-201ENST00000557548 PCNPQ8WW12 178 aaKnown RBP2.65□□□□□ -1.99
TRAV28-201ENST00000557548 PIGCQ92535 297 aa2.65□□□□□ -1.99
TRAV28-201ENST00000557548 RAPGEF5Q92565 580 aa2.65□□□□□ -1.99
TRAV28-201ENST00000557548 SLCO2A1Q92959 643 aa2.65□□□□□ -1.99
TRAV28-201ENST00000557548 TADA1Q96BN2 335 aa2.65□□□□□ -1.99
TRAV28-201ENST00000557548 AGAP4Q96P64 663 aa2.65□□□□□ -1.99
TRAV28-201ENST00000557548 RCHY1Q96PM5 261 aa2.65□□□□□ -1.99
TRAV28-201ENST00000557548 USP28Q96RU2 1077 aa2.65□□□□□ -1.99
TRAV28-201ENST00000557548 CCNL2Q96S94 520 aaPredicted RBP2.65□□□□□ -1.99
TRAV28-201ENST00000557548 NPY6RQ99463 290 aa2.65□□□□□ -1.99
TRAV28-201ENST00000557548 PLIN2Q99541 437 aa2.65□□□□□ -1.99
TRAV28-201ENST00000557548 EPYCQ99645 322 aa2.65□□□□□ -1.99
TRAV28-201ENST00000557548 GPR61Q9BZJ8 451 aa2.65□□□□□ -1.99
TRAV28-201ENST00000557548 SLC7A5P2Q9GIP4 190 aa2.65□□□□□ -1.99
TRAV28-201ENST00000557548 EHD1Q9H4M9 534 aa2.65□□□□□ -1.99
TRAV28-201ENST00000557548 NT5DC2Q9H857 520 aa2.65□□□□□ -1.99
TRAV28-201ENST00000557548 VCPKMTQ9H867 229 aa2.65□□□□□ -1.99
TRAV28-201ENST00000557548 WDR41Q9HAD4 459 aa2.65□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms