RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 NCBP2P52298 156 aaKnown RBP eCLIP14.38□□□□□ -0.11
TUBB3-213ENST00000557262 B3GALT5-AS1P59052 145 aa14.38□□□□□ -0.11
TUBB3-213ENST00000557262 KEAP1Q14145 624 aa14.38□□□□□ -0.11
TUBB3-213ENST00000557262 IMPG1Q17R60 797 aa14.38□□□□□ -0.11
TUBB3-213ENST00000557262 FAM153CQ494X1 144 aa14.38□□□□□ -0.11
TUBB3-213ENST00000557262 SH2D4BQ5SQS7 431 aa14.38□□□□□ -0.11
TUBB3-213ENST00000557262 TRIM46Q7Z4K8 759 aa14.38□□□□□ -0.11
TUBB3-213ENST00000557262 GCNT2Q8N0V5 402 aa14.38□□□□□ -0.11
TUBB3-213ENST00000557262 CEP112Q8N8E3 955 aa14.38□□□□□ -0.11
TUBB3-213ENST00000557262 FADS6Q8N9I5 356 aa14.38□□□□□ -0.11
TUBB3-213ENST00000557262 CDC26Q8NHZ8 85 aa14.38□□□□□ -0.11
TUBB3-213ENST00000557262 FAM76AQ8TAV0 307 aa14.38□□□□□ -0.11
TUBB3-213ENST00000557262 MZB1Q8WU39 189 aa14.38□□□□□ -0.11
TUBB3-213ENST00000557262 NDRG3Q9UGV2 375 aa14.38□□□□□ -0.11
TUBB3-213ENST00000557262 PACSIN3Q9UKS6 424 aa14.38□□□□□ -0.11
TUBB3-213ENST00000557262 EMCNQ9ULC0 261 aa14.38□□□□□ -0.11
TUBB3-213ENST00000557262 TNFSF12-TNFSF13A0A0A6YY99 330 aa14.37□□□□□ -0.11
TUBB3-213ENST00000557262 A0A1W2PPM1 405 aa14.37□□□□□ -0.11
TUBB3-213ENST00000557262 SH3D21A4FU49 640 aa14.37□□□□□ -0.11
TUBB3-213ENST00000557262 B4DXG7 233 aa14.37□□□□□ -0.11
TUBB3-213ENST00000557262 KIF2AO00139 706 aaPredicted RBP14.37□□□□□ -0.11
TUBB3-213ENST00000557262 UPK1AO00322 258 aa14.37□□□□□ -0.11
TUBB3-213ENST00000557262 CASKO14936 926 aa14.37□□□□□ -0.11
TUBB3-213ENST00000557262 SCO2O43819 266 aa14.37□□□□□ -0.11
TUBB3-213ENST00000557262 TNFSF13O75888 250 aa14.37□□□□□ -0.11
TUBB3-213ENST00000557262 ATE1O95260 518 aa14.37□□□□□ -0.11
TUBB3-213ENST00000557262 HRGP04196 525 aa14.37□□□□□ -0.11
TUBB3-213ENST00000557262 CRHP06850 196 aa14.37□□□□□ -0.11
TUBB3-213ENST00000557262 TCEA1P23193 301 aaKnown RBP14.37□□□□□ -0.11
TUBB3-213ENST00000557262 EVI2BP34910 448 aa14.37□□□□□ -0.11
TUBB3-213ENST00000557262 MC3RP41968 323 aa14.37□□□□□ -0.11
TUBB3-213ENST00000557262 ADAM8P78325 824 aa14.37□□□□□ -0.11
TUBB3-213ENST00000557262 ZNF155Q12901 538 aaPredicted RBP14.37□□□□□ -0.11
TUBB3-213ENST00000557262 FOXD4Q12950 439 aaPredicted RBP14.37□□□□□ -0.11
TUBB3-213ENST00000557262 DECR1Q16698 335 aa14.37□□□□□ -0.11
TUBB3-213ENST00000557262 DEFB113Q30KQ7 82 aa14.37□□□□□ -0.11
TUBB3-213ENST00000557262 KRTAP21-3Q3LHN1 58 aa14.37□□□□□ -0.11
TUBB3-213ENST00000557262 ZYG11AQ6WRX3 759 aa14.37□□□□□ -0.11
TUBB3-213ENST00000557262 P4HA3Q7Z4N8 544 aa14.37□□□□□ -0.11
TUBB3-213ENST00000557262 OR2M3Q8NG83 312 aa14.37□□□□□ -0.11
TUBB3-213ENST00000557262 TXLNGYQ9BZA5 131 aa14.37□□□□□ -0.11
TUBB3-213ENST00000557262 GLIPR2Q9H4G4 154 aa14.37□□□□□ -0.11
TUBB3-213ENST00000557262 MYNNQ9NPC7 610 aa14.37□□□□□ -0.11
TUBB3-213ENST00000557262 RRAGDQ9NQL2 400 aaPredicted RBP14.37□□□□□ -0.11
TUBB3-213ENST00000557262 MED11Q9P086 117 aa14.37□□□□□ -0.11
TUBB3-213ENST00000557262 MRTO4Q9UKD2 239 aaKnown RBP14.37□□□□□ -0.11
TUBB3-213ENST00000557262 A0A1W2PNV4 684 aa14.36□□□□□ -0.11
TUBB3-213ENST00000557262 C17orf51A8MQB3 221 aa14.36□□□□□ -0.11
TUBB3-213ENST00000557262 LINC01387J3KSC0 135 aa14.36□□□□□ -0.11
TUBB3-213ENST00000557262 MSTNO14793 375 aa14.36□□□□□ -0.11
TUBB3-213ENST00000557262 GLRA3O75311 464 aa14.36□□□□□ -0.11
TUBB3-213ENST00000557262 CRCPO75575 148 aa14.36□□□□□ -0.11
TUBB3-213ENST00000557262 FOSL1P15407 271 aa14.36□□□□□ -0.11
TUBB3-213ENST00000557262 HK1P19367 917 aa14.36□□□□□ -0.11
TUBB3-213ENST00000557262 NTSP30990 170 aa14.36□□□□□ -0.11
TUBB3-213ENST00000557262 CCT5P48643 541 aa14.36□□□□□ -0.11
TUBB3-213ENST00000557262 CLK3P49761 638 aaKnown RBP14.36□□□□□ -0.11
TUBB3-213ENST00000557262 EEFSECP57772 596 aaKnown RBP14.36□□□□□ -0.11
TUBB3-213ENST00000557262 ZNHIT3Q15649 155 aaPredicted RBP14.36□□□□□ -0.11
TUBB3-213ENST00000557262 OR2A2Q6IF42 318 aa14.36□□□□□ -0.11
TUBB3-213ENST00000557262 NOXRED1Q6NXP6 359 aa14.36□□□□□ -0.11
TUBB3-213ENST00000557262 TMEM107Q6UX40 140 aa14.36□□□□□ -0.11
TUBB3-213ENST00000557262 SH2D5Q6ZV89 423 aa14.36□□□□□ -0.11
TUBB3-213ENST00000557262 UBQLNLQ8IYU4 475 aa14.36□□□□□ -0.11
TUBB3-213ENST00000557262 OR2L13Q8N349 312 aa14.36□□□□□ -0.11
TUBB3-213ENST00000557262 MEIOBQ8N635 442 aa14.36□□□□□ -0.11
TUBB3-213ENST00000557262 KIF18AQ8NI77 898 aa14.36□□□□□ -0.11
TUBB3-213ENST00000557262 DUSP19Q8WTR2 217 aa14.36□□□□□ -0.11
TUBB3-213ENST00000557262 STARD4Q96DR4 205 aa14.36□□□□□ -0.11
TUBB3-213ENST00000557262 ELP4Q96EB1 424 aa14.36□□□□□ -0.11
TUBB3-213ENST00000557262 AMDHD1Q96NU7 426 aa14.36□□□□□ -0.11
TUBB3-213ENST00000557262 PTGES2Q9H7Z7 377 aa14.36□□□□□ -0.11
TUBB3-213ENST00000557262 Q9N2J8 555 aa14.36□□□□□ -0.11
TUBB3-213ENST00000557262 DDX18Q9NVP1 670 aaKnown RBP14.36□□□□□ -0.11
TUBB3-213ENST00000557262 ABCG2Q9UNQ0 655 aa14.36□□□□□ -0.11
TUBB3-213ENST00000557262 ZNF337Q9Y3M9 751 aa14.36□□□□□ -0.11
TUBB3-213ENST00000557262 POLR3HQ9Y535 204 aaPredicted RBP14.36□□□□□ -0.11
TUBB3-213ENST00000557262 ACANP16112 2415 aa14.35□□□□□ -0.11
TUBB3-213ENST00000557262 SLC22A20A6NK97 555 aa14.35□□□□□ -0.11
TUBB3-213ENST00000557262 TTC36A6NLP5 189 aa14.35□□□□□ -0.11
TUBB3-213ENST00000557262 SEC22BO75396 215 aa14.35□□□□□ -0.11
TUBB3-213ENST00000557262 TNFRSF21O75509 655 aa14.35□□□□□ -0.11
TUBB3-213ENST00000557262 RSL1D1O76021 490 aaKnown RBP14.35□□□□□ -0.11
TUBB3-213ENST00000557262 PSMG1O95456 288 aa14.35□□□□□ -0.11
TUBB3-213ENST00000557262 IL33O95760 270 aa14.35□□□□□ -0.11
TUBB3-213ENST00000557262 PROCP04070 461 aa14.35□□□□□ -0.11
TUBB3-213ENST00000557262 PCYT1AP49585 367 aa14.35□□□□□ -0.11
TUBB3-213ENST00000557262 PSMD4P55036 377 aaKnown RBP14.35□□□□□ -0.11
TUBB3-213ENST00000557262 DNAJB13P59910 316 aa14.35□□□□□ -0.11
TUBB3-213ENST00000557262 GANABQ14697 944 aaKnown RBP14.35□□□□□ -0.11
TUBB3-213ENST00000557262 POU4F3Q15319 338 aa14.35□□□□□ -0.11
TUBB3-213ENST00000557262 CCDC153Q494R4 210 aa14.35□□□□□ -0.11
TUBB3-213ENST00000557262 GLYR1Q49A26 553 aaPredicted RBP14.35□□□□□ -0.11
TUBB3-213ENST00000557262 CFAP157Q5JU67 520 aa14.35□□□□□ -0.11
TUBB3-213ENST00000557262 FRMD7Q6ZUT3 714 aa14.35□□□□□ -0.11
TUBB3-213ENST00000557262 SMPDL3BQ92485 455 aa14.35□□□□□ -0.11
TUBB3-213ENST00000557262 POM121Q96HA1 1249 aa14.35□□□□□ -0.11
TUBB3-213ENST00000557262 METTL2AQ96IZ6 378 aaKnown RBP14.35□□□□□ -0.11
TUBB3-213ENST00000557262 RHOXF2Q9BQY4 288 aa14.35□□□□□ -0.11
TUBB3-213ENST00000557262 LMF2Q9BU23 707 aaKnown RBP14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms