RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, human

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCFD1-223	ENST00000557076	MIDN	Q504T8	468 aa		4.21	□□□□□ -1.74
SCFD1-223	ENST00000557076	CTSL3P	Q5NE16	218 aa		4.21	□□□□□ -1.74
SCFD1-223	ENST00000557076	DARS2	Q6PI48	645 aa	Known RBP	4.21	□□□□□ -1.74
SCFD1-223	ENST00000557076	CLEC2A	Q6UVW9	174 aa		4.21	□□□□□ -1.74
SCFD1-223	ENST00000557076	LCTL	Q6UWM7	567 aa		4.21	□□□□□ -1.74
SCFD1-223	ENST00000557076		Q6ZNX1	250 aa		4.21	□□□□□ -1.74
SCFD1-223	ENST00000557076	SDCCAG8	Q86SQ7	713 aa	Predicted RBP	4.21	□□□□□ -1.74
SCFD1-223	ENST00000557076	DTX2	Q86UW9	622 aa		4.21	□□□□□ -1.74
SCFD1-223	ENST00000557076	GRAMD2A	Q8IUY3	354 aa		4.21	□□□□□ -1.74
SCFD1-223	ENST00000557076	CCDC50	Q8IVM0	306 aa		4.21	□□□□□ -1.74
SCFD1-223	ENST00000557076	CDKL3	Q8IVW4	592 aa	Predicted RBP	4.21	□□□□□ -1.74
SCFD1-223	ENST00000557076	KATNAL2	Q8IYT4	538 aa		4.21	□□□□□ -1.74
SCFD1-223	ENST00000557076	FAM83F	Q8NEG4	500 aa	Predicted RBP	4.21	□□□□□ -1.74
SCFD1-223	ENST00000557076	OR52K1	Q8NGK4	314 aa		4.21	□□□□□ -1.74
SCFD1-223	ENST00000557076	ACTL9	Q8TC94	416 aa		4.21	□□□□□ -1.74
SCFD1-223	ENST00000557076	SLC2A12	Q8TD20	617 aa		4.21	□□□□□ -1.74
SCFD1-223	ENST00000557076	FAM216A	Q8WUB2	273 aa		4.21	□□□□□ -1.74
SCFD1-223	ENST00000557076	HAUS1	Q96CS2	278 aa		4.21	□□□□□ -1.74
SCFD1-223	ENST00000557076	SNF8	Q96H20	258 aa		4.21	□□□□□ -1.74
SCFD1-223	ENST00000557076	ZNF597	Q96LX8	424 aa		4.21	□□□□□ -1.74
SCFD1-223	ENST00000557076	ADAD1	Q96M93	576 aa	Known RBP	4.21	□□□□□ -1.74
SCFD1-223	ENST00000557076	NEU1	Q99519	415 aa		4.21	□□□□□ -1.74
SCFD1-223	ENST00000557076	KLHL4	Q9C0H6	718 aa		4.21	□□□□□ -1.74
SCFD1-223	ENST00000557076	OPN3	Q9H1Y3	402 aa	Predicted RBP	4.21	□□□□□ -1.74
SCFD1-223	ENST00000557076	MS4A5	Q9H3V2	200 aa		4.21	□□□□□ -1.74
SCFD1-223	ENST00000557076	KLHL31	Q9H511	634 aa		4.21	□□□□□ -1.74
SCFD1-223	ENST00000557076	PLSCR4	Q9NRQ2	329 aa		4.21	□□□□□ -1.74
SCFD1-223	ENST00000557076	PIH1D1	Q9NWS0	290 aa	Known RBP	4.21	□□□□□ -1.74
SCFD1-223	ENST00000557076	MARCH4	Q9P2E8	410 aa	Predicted RBP	4.21	□□□□□ -1.74
SCFD1-223	ENST00000557076	GALP	Q9UBC7	116 aa		4.21	□□□□□ -1.74
SCFD1-223	ENST00000557076	COPS7A	Q9UBW8	275 aa		4.21	□□□□□ -1.74
SCFD1-223	ENST00000557076	SH2B3	Q9UQQ2	575 aa		4.21	□□□□□ -1.74
SCFD1-223	ENST00000557076	MRPS33	Q9Y291	106 aa	Known RBP	4.21	□□□□□ -1.74
SCFD1-223	ENST00000557076	MAGED1	Q9Y5V3	778 aa	Predicted RBP	4.21	□□□□□ -1.74
SCFD1-223	ENST00000557076	YLPM1	P49750	1951 aa	Known RBP	4.21	□□□□□ -1.74
SCFD1-223	ENST00000557076		A0A1W2PP18	115 aa		4.2	□□□□□ -1.74
SCFD1-223	ENST00000557076	C17orf105	B2RV13	164 aa		4.2	□□□□□ -1.74
SCFD1-223	ENST00000557076		H0Y3Z8	333 aa		4.2	□□□□□ -1.74
SCFD1-223	ENST00000557076	PLOD2	O00469	737 aa		4.2	□□□□□ -1.74
SCFD1-223	ENST00000557076	PSTPIP1	O43586	416 aa		4.2	□□□□□ -1.74
SCFD1-223	ENST00000557076	HCRTR2	O43614	444 aa		4.2	□□□□□ -1.74
SCFD1-223	ENST00000557076	NIPSNAP2	O75323	286 aa		4.2	□□□□□ -1.74
SCFD1-223	ENST00000557076	CBR3	O75828	277 aa		4.2	□□□□□ -1.74
SCFD1-223	ENST00000557076	PRKD3	O94806	890 aa		4.2	□□□□□ -1.74
SCFD1-223	ENST00000557076	FTCD	O95954	541 aa		4.2	□□□□□ -1.74
SCFD1-223	ENST00000557076	MPC1L	P0DKB6	136 aa		4.2	□□□□□ -1.74
SCFD1-223	ENST00000557076	TNNT1	P13805	278 aa		4.2	□□□□□ -1.74
SCFD1-223	ENST00000557076	ENO3	P13929	434 aa	Predicted RBP	4.2	□□□□□ -1.74
SCFD1-223	ENST00000557076	CREB1	P16220	341 aa		4.2	□□□□□ -1.74
SCFD1-223	ENST00000557076	IL11	P20809	199 aa		4.2	□□□□□ -1.74
SCFD1-223	ENST00000557076	PTPN6	P29350	595 aa		4.2	□□□□□ -1.74
SCFD1-223	ENST00000557076	HNF4A	P41235	474 aa		4.2	□□□□□ -1.74
SCFD1-223	ENST00000557076	CASP3	P42574	277 aa		4.2	□□□□□ -1.74
SCFD1-223	ENST00000557076	MSH2	P43246	934 aa		4.2	□□□□□ -1.74
SCFD1-223	ENST00000557076	LHX2	P50458	406 aa		4.2	□□□□□ -1.74
SCFD1-223	ENST00000557076	HNRNPF	P52597	415 aa	Known RBP	4.2	□□□□□ -1.74
SCFD1-223	ENST00000557076	CHN2	P52757	468 aa		4.2	□□□□□ -1.74
SCFD1-223	ENST00000557076	RAB38	P57729	211 aa		4.2	□□□□□ -1.74
SCFD1-223	ENST00000557076	TBPL1	P62380	186 aa		4.2	□□□□□ -1.74
SCFD1-223	ENST00000557076	BTN3A2	P78410	334 aa		4.2	□□□□□ -1.74
SCFD1-223	ENST00000557076	ZBED6	P86452	979 aa		4.2	□□□□□ -1.74
SCFD1-223	ENST00000557076	SRY	Q05066	204 aa		4.2	□□□□□ -1.74
SCFD1-223	ENST00000557076	STX4	Q12846	297 aa		4.2	□□□□□ -1.74
SCFD1-223	ENST00000557076	NAE1	Q13564	534 aa		4.2	□□□□□ -1.74
SCFD1-223	ENST00000557076	TRIM25	Q14258	630 aa	Known RBP	4.2	□□□□□ -1.74
SCFD1-223	ENST00000557076	TOMM20	Q15388	145 aa		4.2	□□□□□ -1.74
SCFD1-223	ENST00000557076	SLC18A3	Q16572	532 aa		4.2	□□□□□ -1.74
SCFD1-223	ENST00000557076	ZNF672	Q499Z4	452 aa	Predicted RBP	4.2	□□□□□ -1.74
SCFD1-223	ENST00000557076	ZNF362	Q5T0B9	420 aa	Predicted RBP	4.2	□□□□□ -1.74
SCFD1-223	ENST00000557076	MRNIP	Q6NTE8	343 aa		4.2	□□□□□ -1.74
SCFD1-223	ENST00000557076	CASC4	Q6P4E1	433 aa		4.2	□□□□□ -1.74
SCFD1-223	ENST00000557076	VWA1	Q6PCB0	445 aa		4.2	□□□□□ -1.74
SCFD1-223	ENST00000557076	AAGAB	Q6PD74	315 aa		4.2	□□□□□ -1.74
SCFD1-223	ENST00000557076	SBSN	Q6UWP8	590 aa		4.2	□□□□□ -1.74
SCFD1-223	ENST00000557076	STAC2	Q6ZMT1	411 aa		4.2	□□□□□ -1.74
SCFD1-223	ENST00000557076	IL17REL	Q6ZVW7	336 aa		4.2	□□□□□ -1.74
SCFD1-223	ENST00000557076	YRDC	Q86U90	279 aa	Known RBP	4.2	□□□□□ -1.74
SCFD1-223	ENST00000557076	LYSMD2	Q8IV50	215 aa		4.2	□□□□□ -1.74
SCFD1-223	ENST00000557076	C9orf40	Q8IXQ3	194 aa		4.2	□□□□□ -1.74
SCFD1-223	ENST00000557076	PRELID2	Q8N945	189 aa		4.2	□□□□□ -1.74
SCFD1-223	ENST00000557076	CNEP1R1	Q8N9A8	125 aa		4.2	□□□□□ -1.74
SCFD1-223	ENST00000557076	OR56A1	Q8NGH5	318 aa		4.2	□□□□□ -1.74
SCFD1-223	ENST00000557076	OR1J4	Q8NGS1	313 aa		4.2	□□□□□ -1.74
SCFD1-223	ENST00000557076	RAB3IL1	Q8TBN0	382 aa		4.2	□□□□□ -1.74
SCFD1-223	ENST00000557076	SPPL2A	Q8TCT8	520 aa		4.2	□□□□□ -1.74
SCFD1-223	ENST00000557076	ANKRD7	Q92527	254 aa		4.2	□□□□□ -1.74
SCFD1-223	ENST00000557076	LPGAT1	Q92604	370 aa		4.2	□□□□□ -1.74
SCFD1-223	ENST00000557076	KAT2A	Q92830	837 aa		4.2	□□□□□ -1.74
SCFD1-223	ENST00000557076	PYCR2	Q96C36	320 aa		4.2	□□□□□ -1.74
SCFD1-223	ENST00000557076	RHBDF1	Q96CC6	855 aa		4.2	□□□□□ -1.74
SCFD1-223	ENST00000557076	MSI2	Q96DH6	328 aa	Known RBP	4.2	□□□□□ -1.74
SCFD1-223	ENST00000557076	RBM18	Q96H35	190 aa	Known RBP	4.2	□□□□□ -1.74
SCFD1-223	ENST00000557076	TMEM41A	Q96HV5	264 aa		4.2	□□□□□ -1.74
SCFD1-223	ENST00000557076	ZNF845	Q96IR2	970 aa	Predicted RBP	4.2	□□□□□ -1.74
SCFD1-223	ENST00000557076	FAR2	Q96K12	515 aa		4.2	□□□□□ -1.74
SCFD1-223	ENST00000557076	RILP	Q96NA2	401 aa		4.2	□□□□□ -1.74
SCFD1-223	ENST00000557076	ANP32E	Q9BTT0	268 aa		4.2	□□□□□ -1.74
SCFD1-223	ENST00000557076	TRAF4	Q9BUZ4	470 aa	Predicted RBP	4.2	□□□□□ -1.74
SCFD1-223	ENST00000557076	NTMT1	Q9BV86	223 aa		4.2	□□□□□ -1.74
SCFD1-223	ENST00000557076	HEMGN	Q9BXL5	484 aa		4.2	□□□□□ -1.74

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