RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 CLEC6AQ6EIG7 209 aa6.69□□□□□ -1.34
SCFD1-222ENST00000556768 LARP4Q71RC2 724 aaKnown RBP eCLIP6.69□□□□□ -1.34
SCFD1-222ENST00000556768 R3HCC1LQ7Z5L2 792 aaKnown RBP6.69□□□□□ -1.34
SCFD1-222ENST00000556768 WDR53Q7Z5U6 358 aaPredicted RBP6.69□□□□□ -1.34
SCFD1-222ENST00000556768 SLC44A2Q8IWA5 706 aaPredicted RBP6.69□□□□□ -1.34
SCFD1-222ENST00000556768 DDIASQ8IXT1 998 aa6.69□□□□□ -1.34
SCFD1-222ENST00000556768 ULK2Q8IYT8 1036 aa6.69□□□□□ -1.34
SCFD1-222ENST00000556768 LRRN4CLQ8ND94 238 aa6.69□□□□□ -1.34
SCFD1-222ENST00000556768 OR14L1PQ8NHC6 308 aa6.69□□□□□ -1.34
SCFD1-222ENST00000556768 ZFP28Q8NHY6 868 aa6.69□□□□□ -1.34
SCFD1-222ENST00000556768 PPP1R14CQ8TAE6 165 aa6.69□□□□□ -1.34
SCFD1-222ENST00000556768 ABTB1Q969K4 478 aaPredicted RBP6.69□□□□□ -1.34
SCFD1-222ENST00000556768 C11orf24Q96F05 449 aaPredicted RBP6.69□□□□□ -1.34
SCFD1-222ENST00000556768 APOPT1Q96IL0 206 aa6.69□□□□□ -1.34
SCFD1-222ENST00000556768 BTBD9Q96Q07 612 aa6.69□□□□□ -1.34
SCFD1-222ENST00000556768 TIMP4Q99727 224 aa6.69□□□□□ -1.34
SCFD1-222ENST00000556768 MDFIQ99750 246 aa6.69□□□□□ -1.34
SCFD1-222ENST00000556768 UCK2Q9BZX2 261 aa6.69□□□□□ -1.34
SCFD1-222ENST00000556768 ENKD1Q9H0I2 346 aa6.69□□□□□ -1.34
SCFD1-222ENST00000556768 SLC6A15Q9H2J7 730 aa6.69□□□□□ -1.34
SCFD1-222ENST00000556768 LRTM1Q9HBL6 345 aa6.69□□□□□ -1.34
SCFD1-222ENST00000556768 PROK2Q9HC23 129 aa6.69□□□□□ -1.34
SCFD1-222ENST00000556768 HHATLQ9HCP6 504 aa6.69□□□□□ -1.34
SCFD1-222ENST00000556768 Q9N2J8 555 aa6.69□□□□□ -1.34
SCFD1-222ENST00000556768 MYNNQ9NPC7 610 aa6.69□□□□□ -1.34
SCFD1-222ENST00000556768 PLA2G2EQ9NZK7 142 aa6.69□□□□□ -1.34
SCFD1-222ENST00000556768 CAMK2AQ9UQM7 478 aa6.69□□□□□ -1.34
SCFD1-222ENST00000556768 DTX4Q9Y2E6 619 aa6.69□□□□□ -1.34
SCFD1-222ENST00000556768 FIS1Q9Y3D6 152 aa6.69□□□□□ -1.34
SCFD1-222ENST00000556768 PRAMEF25A6NGN4 478 aa6.69□□□□□ -1.34
SCFD1-222ENST00000556768 TTC36A6NLP5 189 aa6.69□□□□□ -1.34
SCFD1-222ENST00000556768 MYO1GB0I1T2 1018 aa6.69□□□□□ -1.34
SCFD1-222ENST00000556768 UGT2B11O75310 529 aa6.69□□□□□ -1.34
SCFD1-222ENST00000556768 KCNH1O95259 989 aa6.69□□□□□ -1.34
SCFD1-222ENST00000556768 PGRP06401 933 aa6.69□□□□□ -1.34
SCFD1-222ENST00000556768 TUBBP07437 444 aa6.69□□□□□ -1.34
SCFD1-222ENST00000556768 FGF4P08620 206 aa6.69□□□□□ -1.34
SCFD1-222ENST00000556768 CT45A8P0DMV1 189 aa6.69□□□□□ -1.34
SCFD1-222ENST00000556768 CT45A9P0DMV2 189 aa6.69□□□□□ -1.34
SCFD1-222ENST00000556768 SERPINB5P36952 375 aa6.69□□□□□ -1.34
SCFD1-222ENST00000556768 ADH7P40394 386 aa6.69□□□□□ -1.34
SCFD1-222ENST00000556768 KIR3DL1P43629 444 aa6.69□□□□□ -1.34
SCFD1-222ENST00000556768 ASMTP46597 345 aa6.69□□□□□ -1.34
SCFD1-222ENST00000556768 MANFP55145 182 aaKnown RBP6.69□□□□□ -1.34
SCFD1-222ENST00000556768 VSNL1P62760 191 aa6.69□□□□□ -1.34
SCFD1-222ENST00000556768 ZNF155Q12901 538 aaPredicted RBP6.69□□□□□ -1.34
SCFD1-222ENST00000556768 CEBPEQ15744 281 aa6.69□□□□□ -1.34
SCFD1-222ENST00000556768 CT45A2Q5DJT8 189 aa6.69□□□□□ -1.34
SCFD1-222ENST00000556768 RIPPLY2Q5TAB7 128 aa6.69□□□□□ -1.34
SCFD1-222ENST00000556768 VASNQ6EMK4 673 aa6.69□□□□□ -1.34
SCFD1-222ENST00000556768 FAM71E1Q6IPT2 247 aa6.69□□□□□ -1.34
SCFD1-222ENST00000556768 WDR93Q6P2C0 686 aa6.69□□□□□ -1.34
SCFD1-222ENST00000556768 CHMP1BQ7LBR1 199 aa6.69□□□□□ -1.34
SCFD1-222ENST00000556768 PLCZ1Q86YW0 608 aa6.69□□□□□ -1.34
SCFD1-222ENST00000556768 LACC1Q8IV20 430 aa6.69□□□□□ -1.34
SCFD1-222ENST00000556768 MARVELD2Q8N4S9 558 aa6.69□□□□□ -1.34
SCFD1-222ENST00000556768 BANPQ8N9N5 519 aa6.69□□□□□ -1.34
SCFD1-222ENST00000556768 OR2W6PQ8NHA6 318 aa6.69□□□□□ -1.34
SCFD1-222ENST00000556768 CEP70Q8NHQ1 597 aa6.69□□□□□ -1.34
SCFD1-222ENST00000556768 C14orf79Q96F83 325 aa6.69□□□□□ -1.34
SCFD1-222ENST00000556768 ZBED6CLQ96FA7 236 aaPredicted RBP6.69□□□□□ -1.34
SCFD1-222ENST00000556768 VSTM2LQ96N03 204 aa6.69□□□□□ -1.34
SCFD1-222ENST00000556768 FAM111AQ96PZ2 611 aa6.69□□□□□ -1.34
SCFD1-222ENST00000556768 PRPF18Q99633 342 aaKnown RBP6.69□□□□□ -1.34
SCFD1-222ENST00000556768 UBQLN3Q9H347 655 aa6.69□□□□□ -1.34
SCFD1-222ENST00000556768 PTGES2Q9H7Z7 377 aa6.69□□□□□ -1.34
SCFD1-222ENST00000556768 ANKZF1Q9H8Y5 726 aa6.69□□□□□ -1.34
SCFD1-222ENST00000556768 MKS1Q9NXB0 559 aa6.69□□□□□ -1.34
SCFD1-222ENST00000556768 TAS2R10Q9NYW0 307 aa6.69□□□□□ -1.34
SCFD1-222ENST00000556768 SH3BP4Q9P0V3 963 aa6.69□□□□□ -1.34
SCFD1-222ENST00000556768 SPRR3Q9UBC9 169 aa6.69□□□□□ -1.34
SCFD1-222ENST00000556768 STOML1Q9UBI4 398 aa6.69□□□□□ -1.34
SCFD1-222ENST00000556768 ZNF629Q9UEG4 869 aaPredicted RBP6.69□□□□□ -1.34
SCFD1-222ENST00000556768 TRAF6Q9Y4K3 522 aa6.69□□□□□ -1.34
SCFD1-222ENST00000556768 A0A0G2JNJ9 132 aa6.68□□□□□ -1.34
SCFD1-222ENST00000556768 ANKRD34BA5PLL1 514 aa6.68□□□□□ -1.34
SCFD1-222ENST00000556768 NKX2-6A6NCS4 301 aa6.68□□□□□ -1.34
SCFD1-222ENST00000556768 ADARB2-AS1A8MUL3 147 aa6.68□□□□□ -1.34
SCFD1-222ENST00000556768 C19orf84I3L1E1 186 aa6.68□□□□□ -1.34
SCFD1-222ENST00000556768 PLOD2O00469 737 aa6.68□□□□□ -1.34
SCFD1-222ENST00000556768 NPHS1O60500 1241 aa6.68□□□□□ -1.34
SCFD1-222ENST00000556768 TOXO94900 526 aa6.68□□□□□ -1.34
SCFD1-222ENST00000556768 EPPINO95925 133 aa6.68□□□□□ -1.34
SCFD1-222ENST00000556768 LINC00032P0C843 101 aa6.68□□□□□ -1.34
SCFD1-222ENST00000556768 CYP4B1P13584 511 aa6.68□□□□□ -1.34
SCFD1-222ENST00000556768 BMP5P22003 454 aa6.68□□□□□ -1.34
SCFD1-222ENST00000556768 PRPH2P23942 346 aa6.68□□□□□ -1.34
SCFD1-222ENST00000556768 TIMP3P35625 211 aa6.68□□□□□ -1.34
SCFD1-222ENST00000556768 RPL3P39023 403 aaKnown RBP6.68□□□□□ -1.34
SCFD1-222ENST00000556768 MC3RP41968 323 aa6.68□□□□□ -1.34
SCFD1-222ENST00000556768 CORO7P57737 925 aa6.68□□□□□ -1.34
SCFD1-222ENST00000556768 PPP2R2AP63151 447 aa6.68□□□□□ -1.34
SCFD1-222ENST00000556768 TLE4Q04727 773 aa6.68□□□□□ -1.34
SCFD1-222ENST00000556768 MYBPHQ13203 477 aa6.68□□□□□ -1.34
SCFD1-222ENST00000556768 CDSNQ15517 529 aa6.68□□□□□ -1.34
SCFD1-222ENST00000556768 GALNTL6Q49A17 601 aa6.68□□□□□ -1.34
SCFD1-222ENST00000556768 NHSL2Q5HYW2 709 aa6.68□□□□□ -1.34
SCFD1-222ENST00000556768 TMEM107Q6UX40 140 aa6.68□□□□□ -1.34
SCFD1-222ENST00000556768 LRIG3Q6UXM1 1119 aa6.68□□□□□ -1.34
SCFD1-222ENST00000556768 SZRD1Q7Z422 152 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms