RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 TCEAL8Q8IYN2 117 aa14.18□□□□□ -0.14
ARHGEF40-207ENST00000556399 ACER3Q9NUN7 267 aa14.18□□□□□ -0.14
ARHGEF40-207ENST00000556399 PSMD9O00233 223 aa14.18□□□□□ -0.14
ARHGEF40-207ENST00000556399 UBXN7O94888 489 aa14.18□□□□□ -0.14
ARHGEF40-207ENST00000556399 PAK4O96013 591 aaPredicted RBP14.18□□□□□ -0.14
ARHGEF40-207ENST00000556399 TFPIP10646 304 aa14.18□□□□□ -0.14
ARHGEF40-207ENST00000556399 AK4P27144 223 aaPredicted RBP14.18□□□□□ -0.14
ARHGEF40-207ENST00000556399 MC3RP41968 323 aa14.18□□□□□ -0.14
ARHGEF40-207ENST00000556399 PRSS36Q5K4E3 855 aa14.18□□□□□ -0.14
ARHGEF40-207ENST00000556399 FCRLBQ6BAA4 426 aa14.18□□□□□ -0.14
ARHGEF40-207ENST00000556399 LRRC28Q86X40 367 aaPredicted RBP14.18□□□□□ -0.14
ARHGEF40-207ENST00000556399 SPAG16Q8N0X2 631 aa14.18□□□□□ -0.14
ARHGEF40-207ENST00000556399 CPXM2Q8N436 756 aa14.18□□□□□ -0.14
ARHGEF40-207ENST00000556399 MFSD4AQ8N468 514 aa14.18□□□□□ -0.14
ARHGEF40-207ENST00000556399 CYB561A3Q8NBI2 242 aa14.18□□□□□ -0.14
ARHGEF40-207ENST00000556399 CHTF18Q8WVB6 975 aa14.18□□□□□ -0.14
ARHGEF40-207ENST00000556399 TRMT2BQ96GJ1 504 aaKnown RBP14.18□□□□□ -0.14
ARHGEF40-207ENST00000556399 CCDC120Q96HB5 630 aa14.18□□□□□ -0.14
ARHGEF40-207ENST00000556399 CDCA4Q9BXL8 241 aa14.18□□□□□ -0.14
ARHGEF40-207ENST00000556399 ACTRT3Q9BYD9 372 aa14.18□□□□□ -0.14
ARHGEF40-207ENST00000556399 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.18□□□□□ -0.14
ARHGEF40-207ENST00000556399 MTHFD2LQ9H903 347 aaPredicted RBP14.18□□□□□ -0.14
ARHGEF40-207ENST00000556399 A0A0X1KG70 313 aa14.17□□□□□ -0.14
ARHGEF40-207ENST00000556399 TRAPPC13A5PLN9 417 aa14.17□□□□□ -0.14
ARHGEF40-207ENST00000556399 IGLV3-27P01718 113 aa14.17□□□□□ -0.14
ARHGEF40-207ENST00000556399 ADH7P40394 386 aa14.17□□□□□ -0.14
ARHGEF40-207ENST00000556399 RBM34P42696 430 aaKnown RBP14.17□□□□□ -0.14
ARHGEF40-207ENST00000556399 XCR1P46094 333 aa14.17□□□□□ -0.14
ARHGEF40-207ENST00000556399 RRAS2P62070 204 aaPredicted RBP14.17□□□□□ -0.14
ARHGEF40-207ENST00000556399 COL9A2Q14055 689 aaPredicted RBP14.17□□□□□ -0.14
ARHGEF40-207ENST00000556399 HTR3DQ70Z44 454 aa14.17□□□□□ -0.14
ARHGEF40-207ENST00000556399 TAF8Q7Z7C8 310 aa14.17□□□□□ -0.14
ARHGEF40-207ENST00000556399 OR52I1Q8NGK6 324 aa14.17□□□□□ -0.14
ARHGEF40-207ENST00000556399 WFDC5Q8TCV5 224 aa14.17□□□□□ -0.14
ARHGEF40-207ENST00000556399 PITX2Q99697 317 aa14.17□□□□□ -0.14
ARHGEF40-207ENST00000556399 SLC28A3Q9HAS3 691 aa14.17□□□□□ -0.14
ARHGEF40-207ENST00000556399 GIMD1P0DJR0 217 aa14.17□□□□□ -0.14
ARHGEF40-207ENST00000556399 TIMP2P16035 220 aa14.17□□□□□ -0.14
ARHGEF40-207ENST00000556399 ZNF823P16415 610 aa14.17□□□□□ -0.14
ARHGEF40-207ENST00000556399 GIFP27352 417 aa14.17□□□□□ -0.14
ARHGEF40-207ENST00000556399 HLA-FP30511 346 aa14.17□□□□□ -0.14
ARHGEF40-207ENST00000556399 CRYZQ08257 329 aaKnown RBP14.17□□□□□ -0.14
ARHGEF40-207ENST00000556399 MGAT3Q09327 533 aa14.17□□□□□ -0.14
ARHGEF40-207ENST00000556399 RIPPLY1Q0D2K3 151 aa14.17□□□□□ -0.14
ARHGEF40-207ENST00000556399 CCSMST1Q4G0I0 132 aa14.17□□□□□ -0.14
ARHGEF40-207ENST00000556399 MSRB3Q8IXL7 192 aa14.17□□□□□ -0.14
ARHGEF40-207ENST00000556399 SLC25A36Q96CQ1 311 aa14.17□□□□□ -0.14
ARHGEF40-207ENST00000556399 SLC22A12Q96S37 553 aa14.17□□□□□ -0.14
ARHGEF40-207ENST00000556399 DPEP2Q9H4A9 486 aa14.17□□□□□ -0.14
ARHGEF40-207ENST00000556399 Q9N2J8 555 aa14.17□□□□□ -0.14
ARHGEF40-207ENST00000556399 ZNF226Q9NYT6 803 aa14.17□□□□□ -0.14
ARHGEF40-207ENST00000556399 LAMP5Q9UJQ1 280 aa14.17□□□□□ -0.14
ARHGEF40-207ENST00000556399 RHOP08100 348 aa14.17□□□□□ -0.14
ARHGEF40-207ENST00000556399 ARSBP15848 533 aa14.17□□□□□ -0.14
ARHGEF40-207ENST00000556399 CBLP22681 906 aa14.17□□□□□ -0.14
ARHGEF40-207ENST00000556399 AHRP35869 848 aa14.17□□□□□ -0.14
ARHGEF40-207ENST00000556399 CAMK1Q14012 370 aa14.17□□□□□ -0.14
ARHGEF40-207ENST00000556399 ARHGAP11AQ6P4F7 1023 aa14.17□□□□□ -0.14
ARHGEF40-207ENST00000556399 FAM198BQ6UWH4 519 aa14.17□□□□□ -0.14
ARHGEF40-207ENST00000556399 LIPIQ6XZB0 460 aa14.17□□□□□ -0.14
ARHGEF40-207ENST00000556399 ATCAYQ86WG3 371 aa14.17□□□□□ -0.14
ARHGEF40-207ENST00000556399 TMPRSS12Q86WS5 348 aa14.17□□□□□ -0.14
ARHGEF40-207ENST00000556399 CALHM3Q86XJ0 350 aa14.17□□□□□ -0.14
ARHGEF40-207ENST00000556399 OR52E2Q8NGJ4 325 aa14.17□□□□□ -0.14
ARHGEF40-207ENST00000556399 CNN2Q99439 309 aaKnown RBP14.17□□□□□ -0.14
ARHGEF40-207ENST00000556399 LINC00597Q9H2U6 94 aa14.17□□□□□ -0.14
ARHGEF40-207ENST00000556399 DOCK5Q9H7D0 1870 aa14.17□□□□□ -0.14
ARHGEF40-207ENST00000556399 TGM5O43548 720 aa14.17□□□□□ -0.14
ARHGEF40-207ENST00000556399 GTF2F2P13984 249 aa14.17□□□□□ -0.14
ARHGEF40-207ENST00000556399 GRPRP30550 384 aa14.17□□□□□ -0.14
ARHGEF40-207ENST00000556399 SSTR2P30874 369 aa14.17□□□□□ -0.14
ARHGEF40-207ENST00000556399 HTR3AP46098 478 aa14.17□□□□□ -0.14
ARHGEF40-207ENST00000556399 SNRPGP62308 76 aaKnown RBP14.17□□□□□ -0.14
ARHGEF40-207ENST00000556399 SLC14A1Q13336 389 aa14.17□□□□□ -0.14
ARHGEF40-207ENST00000556399 ATXN7L3Q14CW9 347 aaPredicted RBP14.17□□□□□ -0.14
ARHGEF40-207ENST00000556399 DUSP7Q16829 419 aa14.17□□□□□ -0.14
ARHGEF40-207ENST00000556399 ALG1LQ6GMV1 187 aa14.17□□□□□ -0.14
ARHGEF40-207ENST00000556399 FIGNL1Q6PIW4 674 aa14.17□□□□□ -0.14
ARHGEF40-207ENST00000556399 DPPA4Q7L190 304 aa14.17□□□□□ -0.14
ARHGEF40-207ENST00000556399 ASPGQ86U10 573 aa14.17□□□□□ -0.14
ARHGEF40-207ENST00000556399 WDR20Q8TBZ3 569 aa14.17□□□□□ -0.14
ARHGEF40-207ENST00000556399 NSMAFQ92636 917 aa14.17□□□□□ -0.14
ARHGEF40-207ENST00000556399 HS6ST2Q96MM7 605 aa14.17□□□□□ -0.14
ARHGEF40-207ENST00000556399 FER1L6Q2WGJ9 1857 aa14.16□□□□□ -0.14
ARHGEF40-207ENST00000556399 LOC100509620A0A075B734 347 aa14.16□□□□□ -0.14
ARHGEF40-207ENST00000556399 SLC1A3P43003 542 aa14.16□□□□□ -0.14
ARHGEF40-207ENST00000556399 ELAVL3Q14576 367 aaKnown RBP14.16□□□□□ -0.14
ARHGEF40-207ENST00000556399 HES5Q5TA89 166 aa14.16□□□□□ -0.14
ARHGEF40-207ENST00000556399 MTFR2Q6P444 385 aa14.16□□□□□ -0.14
ARHGEF40-207ENST00000556399 WASH2PQ6VEQ5 465 aa14.16□□□□□ -0.14
ARHGEF40-207ENST00000556399 FAM83HQ6ZRV2 1179 aaPredicted RBP14.16□□□□□ -0.14
ARHGEF40-207ENST00000556399 ZNF740Q8NDX6 193 aa14.16□□□□□ -0.14
ARHGEF40-207ENST00000556399 OR9A2Q8NGT5 310 aa14.16□□□□□ -0.14
ARHGEF40-207ENST00000556399 OR56A3Q8NH54 315 aa14.16□□□□□ -0.14
ARHGEF40-207ENST00000556399 ACOT11Q8WXI4 607 aaPredicted RBP14.16□□□□□ -0.14
ARHGEF40-207ENST00000556399 MYLIPQ8WY64 445 aa14.16□□□□□ -0.14
ARHGEF40-207ENST00000556399 RBCK1Q9BYM8 510 aa14.16□□□□□ -0.14
ARHGEF40-207ENST00000556399 BABAM2Q9NXR7 383 aa14.16□□□□□ -0.14
ARHGEF40-207ENST00000556399 FBXL21Q9UKT6 434 aa14.16□□□□□ -0.14
ARHGEF40-207ENST00000556399 SMLR1H3BR10 107 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms