RNA–Protein interactions for RNA: ENST00000556268.1

GTF2A1-204, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 5

Gene GTF2A1, Length 864 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-204ENST00000556268 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.15□□□□□ -1.1
GTF2A1-204ENST00000556268 PARPBPQ9NWS1 579 aa8.15□□□□□ -1.1
GTF2A1-204ENST00000556268 MS4A12Q9NXJ0 267 aa8.15□□□□□ -1.1
GTF2A1-204ENST00000556268 PSD3Q9NYI0 1048 aa8.15□□□□□ -1.1
GTF2A1-204ENST00000556268 WWOXQ9NZC7 414 aa8.15□□□□□ -1.1
GTF2A1-204ENST00000556268 ING1Q9UK53 422 aaPredicted RBP8.15□□□□□ -1.1
GTF2A1-204ENST00000556268 CHMP2BQ9UQN3 213 aa8.15□□□□□ -1.1
GTF2A1-204ENST00000556268 MTO1Q9Y2Z2 717 aaKnown RBP8.15□□□□□ -1.1
GTF2A1-204ENST00000556268 SPACA6W5XKT8 324 aa8.15□□□□□ -1.1
GTF2A1-204ENST00000556268 ARHGAP21Q5T5U3 1957 aa8.15□□□□□ -1.11
GTF2A1-204ENST00000556268 IQANK1A0A1B0GTG1 560 aa8.14□□□□□ -1.11
GTF2A1-204ENST00000556268 A0A1W2PPR1 153 aa8.14□□□□□ -1.11
GTF2A1-204ENST00000556268 MBD3L4A6NDZ8 208 aaPredicted RBP8.14□□□□□ -1.11
GTF2A1-204ENST00000556268 MBD3L3A6NE82 208 aaPredicted RBP8.14□□□□□ -1.11
GTF2A1-204ENST00000556268 NCF1BA6NI72 391 aaPredicted RBP8.14□□□□□ -1.11
GTF2A1-204ENST00000556268 MBD3L5A6NJ08 208 aaPredicted RBP8.14□□□□□ -1.11
GTF2A1-204ENST00000556268 OR6C76A6NM76 312 aa8.14□□□□□ -1.11
GTF2A1-204ENST00000556268 NCF1CA8MVU1 366 aaPredicted RBP8.14□□□□□ -1.11
GTF2A1-204ENST00000556268 GOLGA6L6A8MZA4 724 aa8.14□□□□□ -1.11
GTF2A1-204ENST00000556268 E7ESA3 106 aa8.14□□□□□ -1.11
GTF2A1-204ENST00000556268 TMEM127O75204 238 aa8.14□□□□□ -1.11
GTF2A1-204ENST00000556268 SNX4O95219 450 aa8.14□□□□□ -1.11
GTF2A1-204ENST00000556268 ACSL3O95573 720 aa8.14□□□□□ -1.11
GTF2A1-204ENST00000556268 HRGP04196 525 aa8.14□□□□□ -1.11
GTF2A1-204ENST00000556268 COX7A2P14406 83 aa8.14□□□□□ -1.11
GTF2A1-204ENST00000556268 NCF1P14598 390 aaPredicted RBP8.14□□□□□ -1.11
GTF2A1-204ENST00000556268 CD1DP15813 335 aa8.14□□□□□ -1.11
GTF2A1-204ENST00000556268 ALOX15P16050 662 aaPredicted RBP8.14□□□□□ -1.11
GTF2A1-204ENST00000556268 CPN2P22792 545 aa8.14□□□□□ -1.11
GTF2A1-204ENST00000556268 CTSSP25774 331 aa8.14□□□□□ -1.11
GTF2A1-204ENST00000556268 SERPINB1P30740 379 aa8.14□□□□□ -1.11
GTF2A1-204ENST00000556268 OPRM1P35372 400 aa8.14□□□□□ -1.11
GTF2A1-204ENST00000556268 PIK3CBP42338 1070 aa8.14□□□□□ -1.11
GTF2A1-204ENST00000556268 MSH2P43246 934 aa8.14□□□□□ -1.11
GTF2A1-204ENST00000556268 TRPC1P48995 793 aa8.14□□□□□ -1.11
GTF2A1-204ENST00000556268 PCYT1AP49585 367 aa8.14□□□□□ -1.11
GTF2A1-204ENST00000556268 LGALS4P56470 323 aa8.14□□□□□ -1.11
GTF2A1-204ENST00000556268 WNT3P56703 355 aa8.14□□□□□ -1.11
GTF2A1-204ENST00000556268 ATP6V0D1P61421 351 aa8.14□□□□□ -1.11
GTF2A1-204ENST00000556268 IRF8Q02556 426 aa8.14□□□□□ -1.11
GTF2A1-204ENST00000556268 DUSP2Q05923 314 aa8.14□□□□□ -1.11
GTF2A1-204ENST00000556268 CHIT1Q13231 466 aa8.14□□□□□ -1.11
GTF2A1-204ENST00000556268 KEAP1Q14145 624 aa8.14□□□□□ -1.11
GTF2A1-204ENST00000556268 EBPQ15125 230 aaKnown RBP8.14□□□□□ -1.11
GTF2A1-204ENST00000556268 PDK4Q16654 411 aa8.14□□□□□ -1.11
GTF2A1-204ENST00000556268 FBXO48Q5FWF7 155 aa8.14□□□□□ -1.11
GTF2A1-204ENST00000556268 PRAMEF20Q5VT98 475 aa8.14□□□□□ -1.11
GTF2A1-204ENST00000556268 KHDRBS2Q5VWX1 349 aaKnown RBP8.14□□□□□ -1.11
GTF2A1-204ENST00000556268 SHEQ5VZ18 495 aa8.14□□□□□ -1.11
GTF2A1-204ENST00000556268 TMEM198Q66K66 360 aa8.14□□□□□ -1.11
GTF2A1-204ENST00000556268 ISCA2Q86U28 154 aa8.14□□□□□ -1.11
GTF2A1-204ENST00000556268 GPR180Q86V85 440 aa8.14□□□□□ -1.11
GTF2A1-204ENST00000556268 ZCCHC7Q8N3Z6 543 aaKnown RBP8.14□□□□□ -1.11
GTF2A1-204ENST00000556268 LIX1Q8N485 282 aa8.14□□□□□ -1.11
GTF2A1-204ENST00000556268 SPATA6LQ8N4H0 392 aa8.14□□□□□ -1.11
GTF2A1-204ENST00000556268 MBD3L2Q8NHZ7 208 aaPredicted RBP8.14□□□□□ -1.11
GTF2A1-204ENST00000556268 SPPL2AQ8TCT8 520 aa8.14□□□□□ -1.11
GTF2A1-204ENST00000556268 ZPLD1Q8TCW7 415 aa8.14□□□□□ -1.11
GTF2A1-204ENST00000556268 ST8SIA2Q92186 375 aa8.14□□□□□ -1.11
GTF2A1-204ENST00000556268 ADIPOR1Q96A54 375 aa8.14□□□□□ -1.11
GTF2A1-204ENST00000556268 CMTM7Q96FZ5 175 aa8.14□□□□□ -1.11
GTF2A1-204ENST00000556268 ART5Q96L15 291 aa8.14□□□□□ -1.11
GTF2A1-204ENST00000556268 RUNDC3BQ96NL0 473 aa8.14□□□□□ -1.11
GTF2A1-204ENST00000556268 DGAT2Q96PD7 388 aa8.14□□□□□ -1.11
GTF2A1-204ENST00000556268 DOHHQ9BU89 302 aa8.14□□□□□ -1.11
GTF2A1-204ENST00000556268 WWTR1Q9GZV5 400 aa8.14□□□□□ -1.11
GTF2A1-204ENST00000556268 DDX47Q9H0S4 455 aaKnown RBP8.14□□□□□ -1.11
GTF2A1-204ENST00000556268 OR51B5Q9H339 312 aa8.14□□□□□ -1.11
GTF2A1-204ENST00000556268 SMYD2Q9NRG4 433 aa8.14□□□□□ -1.11
GTF2A1-204ENST00000556268 BEX4Q9NWD9 120 aaPredicted RBP8.14□□□□□ -1.11
GTF2A1-204ENST00000556268 NSMCE4AQ9NXX6 385 aa8.14□□□□□ -1.11
GTF2A1-204ENST00000556268 ASIC3Q9UHC3 531 aa8.14□□□□□ -1.11
GTF2A1-204ENST00000556268 ASB4Q9Y574 426 aa8.14□□□□□ -1.11
GTF2A1-204ENST00000556268 FBN3Q75N90 2809 aa8.14□□□□□ -1.11
GTF2A1-204ENST00000556268 NCKAP5O14513 1909 aa8.13□□□□□ -1.11
GTF2A1-204ENST00000556268 CSPG4Q6UVK1 2322 aa8.13□□□□□ -1.11
GTF2A1-204ENST00000556268 C15orf38-AP3S2A0A0A6YYH1 394 aa8.13□□□□□ -1.11
GTF2A1-204ENST00000556268 GOLGA6L10A0A0M3HER8 536 aa8.13□□□□□ -1.11
GTF2A1-204ENST00000556268 HOXA3O43365 443 aaPredicted RBP8.13□□□□□ -1.11
GTF2A1-204ENST00000556268 RCBTB2O95199 551 aa8.13□□□□□ -1.11
GTF2A1-204ENST00000556268 LTA4HP09960 611 aaKnown RBP8.13□□□□□ -1.11
GTF2A1-204ENST00000556268 SLC35E2BP0CK96 405 aa8.13□□□□□ -1.11
GTF2A1-204ENST00000556268 SLC35E2P0CK97 266 aa8.13□□□□□ -1.11
GTF2A1-204ENST00000556268 CCDC166P0CW27 439 aa8.13□□□□□ -1.11
GTF2A1-204ENST00000556268 CPN1P15169 458 aa8.13□□□□□ -1.11
GTF2A1-204ENST00000556268 TLX1P31314 330 aaPredicted RBP8.13□□□□□ -1.11
GTF2A1-204ENST00000556268 HNRNPH2P55795 449 aaKnown RBP8.13□□□□□ -1.11
GTF2A1-204ENST00000556268 HERVK_113P63132 956 aa8.13□□□□□ -1.11
GTF2A1-204ENST00000556268 ERVK-8P63133 956 aa8.13□□□□□ -1.11
GTF2A1-204ENST00000556268 ZNF267Q14586 743 aaPredicted RBP8.13□□□□□ -1.11
GTF2A1-204ENST00000556268 C18orf63Q68DL7 685 aa8.13□□□□□ -1.11
GTF2A1-204ENST00000556268 TIGD3Q6B0B8 471 aa8.13□□□□□ -1.11
GTF2A1-204ENST00000556268 MED27Q6P2C8 311 aa8.13□□□□□ -1.11
GTF2A1-204ENST00000556268 FRA10AC1Q70Z53 315 aa8.13□□□□□ -1.11
GTF2A1-204ENST00000556268 SLC29A4Q7RTT9 530 aa8.13□□□□□ -1.11
GTF2A1-204ENST00000556268 TAGAPQ8N103 731 aa8.13□□□□□ -1.11
GTF2A1-204ENST00000556268 ZNF615Q8N8J6 731 aa8.13□□□□□ -1.11
GTF2A1-204ENST00000556268 SNX31Q8N9S9 440 aa8.13□□□□□ -1.11
GTF2A1-204ENST00000556268 RIT1Q92963 219 aa8.13□□□□□ -1.11
GTF2A1-204ENST00000556268 RGMAQ96B86 450 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms