RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 KRTAP1-1Q07627 177 aa12.92□□□□□ -0.34
CHMP4BP1-201ENST00000556017 EFR3AQ14156 821 aa12.92□□□□□ -0.34
CHMP4BP1-201ENST00000556017 TMEM44Q2T9K0 475 aa12.92□□□□□ -0.34
CHMP4BP1-201ENST00000556017 TSNAXIP1Q2TAA8 658 aa12.92□□□□□ -0.34
CHMP4BP1-201ENST00000556017 YTHDF3Q7Z739 585 aaKnown RBP12.92□□□□□ -0.34
CHMP4BP1-201ENST00000556017 SLC44A2Q8IWA5 706 aaPredicted RBP12.92□□□□□ -0.34
CHMP4BP1-201ENST00000556017 UBQLNLQ8IYU4 475 aa12.92□□□□□ -0.34
CHMP4BP1-201ENST00000556017 CDYL2Q8N8U2 506 aa12.92□□□□□ -0.34
CHMP4BP1-201ENST00000556017 CNEP1R1Q8N9A8 125 aa12.92□□□□□ -0.34
CHMP4BP1-201ENST00000556017 OR5M1Q8NGP8 315 aa12.92□□□□□ -0.34
CHMP4BP1-201ENST00000556017 FNDC9Q8TBE3 224 aa12.92□□□□□ -0.34
CHMP4BP1-201ENST00000556017 C16orf78Q8WTQ4 265 aa12.92□□□□□ -0.34
CHMP4BP1-201ENST00000556017 PIGTQ969N2 578 aa12.92□□□□□ -0.34
CHMP4BP1-201ENST00000556017 EXOSC8Q96B26 276 aaKnown RBP12.92□□□□□ -0.34
CHMP4BP1-201ENST00000556017 FAIM2Q9BWQ8 316 aa12.92□□□□□ -0.34
CHMP4BP1-201ENST00000556017 MRPL46Q9H2W6 279 aaKnown RBP12.92□□□□□ -0.34
CHMP4BP1-201ENST00000556017 SLC35C2Q9NQQ7 365 aa12.92□□□□□ -0.34
CHMP4BP1-201ENST00000556017 MED11Q9P086 117 aa12.92□□□□□ -0.34
CHMP4BP1-201ENST00000556017 DKKL1Q9UK85 242 aa12.92□□□□□ -0.34
CHMP4BP1-201ENST00000556017 SNX6Q9UNH7 406 aa12.92□□□□□ -0.34
CHMP4BP1-201ENST00000556017 OR2M5A3KFT3 312 aa12.91□□□□□ -0.34
CHMP4BP1-201ENST00000556017 MYO1GB0I1T2 1018 aa12.91□□□□□ -0.34
CHMP4BP1-201ENST00000556017 TRIM49D1C9J1S8 452 aa12.91□□□□□ -0.34
CHMP4BP1-201ENST00000556017 KLF4O43474 513 aa12.91□□□□□ -0.34
CHMP4BP1-201ENST00000556017 SCO2O43819 266 aa12.91□□□□□ -0.34
CHMP4BP1-201ENST00000556017 TNFRSF21O75509 655 aa12.91□□□□□ -0.34
CHMP4BP1-201ENST00000556017 BCAS2O75934 225 aaPredicted RBP12.91□□□□□ -0.34
CHMP4BP1-201ENST00000556017 AQP8O94778 261 aa12.91□□□□□ -0.34
CHMP4BP1-201ENST00000556017 CD8BP10966 210 aa12.91□□□□□ -0.34
CHMP4BP1-201ENST00000556017 HSD3B1P14060 373 aa12.91□□□□□ -0.34
CHMP4BP1-201ENST00000556017 HSD3B2P26439 372 aa12.91□□□□□ -0.34
CHMP4BP1-201ENST00000556017 GCAP28676 217 aa12.91□□□□□ -0.34
CHMP4BP1-201ENST00000556017 SIRPAP78324 504 aa12.91□□□□□ -0.34
CHMP4BP1-201ENST00000556017 CSTF3Q12996 717 aaKnown RBP12.91□□□□□ -0.34
CHMP4BP1-201ENST00000556017 ZNF678Q5SXM1 525 aa12.91□□□□□ -0.34
CHMP4BP1-201ENST00000556017 OR2A2Q6IF42 318 aa12.91□□□□□ -0.34
CHMP4BP1-201ENST00000556017 GALNT18Q6P9A2 607 aa12.91□□□□□ -0.34
CHMP4BP1-201ENST00000556017 SCIMPQ6UWF3 145 aa12.91□□□□□ -0.34
CHMP4BP1-201ENST00000556017 APOOLQ6UXV4 268 aa12.91□□□□□ -0.34
CHMP4BP1-201ENST00000556017 GGNQ86UU5 652 aa12.91□□□□□ -0.34
CHMP4BP1-201ENST00000556017 P3H2Q8IVL5 708 aa12.91□□□□□ -0.34
CHMP4BP1-201ENST00000556017 GBP7Q8N8V2 638 aaPredicted RBP12.91□□□□□ -0.34
CHMP4BP1-201ENST00000556017 TMEM237Q96Q45 408 aa12.91□□□□□ -0.34
CHMP4BP1-201ENST00000556017 NPAS1Q99742 590 aa12.91□□□□□ -0.34
CHMP4BP1-201ENST00000556017 PINK1Q9BXM7 581 aa12.91□□□□□ -0.34
CHMP4BP1-201ENST00000556017 UBTD1Q9HAC8 227 aa12.91□□□□□ -0.34
CHMP4BP1-201ENST00000556017 SIRT5Q9NXA8 310 aa12.91□□□□□ -0.34
CHMP4BP1-201ENST00000556017 DMGDHQ9UI17 866 aaKnown RBP12.91□□□□□ -0.34
CHMP4BP1-201ENST00000556017 CHD3Q12873 2000 aaKnown RBP12.9□□□□□ -0.34
CHMP4BP1-201ENST00000556017 PCDH7O60245 1069 aa12.9□□□□□ -0.34
CHMP4BP1-201ENST00000556017 DLX3O60479 287 aa12.9□□□□□ -0.34
CHMP4BP1-201ENST00000556017 PLAUP00749 431 aa12.9□□□□□ -0.34
CHMP4BP1-201ENST00000556017 HK1P19367 917 aa12.9□□□□□ -0.34
CHMP4BP1-201ENST00000556017 PCSK6P29122 969 aa12.9□□□□□ -0.34
CHMP4BP1-201ENST00000556017 IL12BP29460 328 aa12.9□□□□□ -0.34
CHMP4BP1-201ENST00000556017 TIA1P31483 386 aaKnown RBP eCLIP12.9□□□□□ -0.34
CHMP4BP1-201ENST00000556017 SLC6A8P48029 635 aa12.9□□□□□ -0.34
CHMP4BP1-201ENST00000556017 ANKRD34AQ69YU3 496 aa12.9□□□□□ -0.34
CHMP4BP1-201ENST00000556017 OR4K17Q8NGC6 315 aa12.9□□□□□ -0.34
CHMP4BP1-201ENST00000556017 NUDT8Q8WV74 236 aa12.9□□□□□ -0.34
CHMP4BP1-201ENST00000556017 MTBPQ96DY7 904 aa12.9□□□□□ -0.34
CHMP4BP1-201ENST00000556017 PERPQ96FX8 193 aa12.9□□□□□ -0.34
CHMP4BP1-201ENST00000556017 FAM111AQ96PZ2 611 aa12.9□□□□□ -0.34
CHMP4BP1-201ENST00000556017 KCNA7Q96RP8 456 aa12.9□□□□□ -0.34
CHMP4BP1-201ENST00000556017 ZNF382Q96SR6 550 aa12.9□□□□□ -0.34
CHMP4BP1-201ENST00000556017 KLHDC3Q9BQ90 382 aa12.9□□□□□ -0.34
CHMP4BP1-201ENST00000556017 MED18Q9BUE0 208 aa12.9□□□□□ -0.34
CHMP4BP1-201ENST00000556017 EBPLQ9BY08 206 aa12.9□□□□□ -0.34
CHMP4BP1-201ENST00000556017 GSX2Q9BZM3 304 aa12.9□□□□□ -0.34
CHMP4BP1-201ENST00000556017 ELOVL5Q9NYP7 299 aa12.9□□□□□ -0.34
CHMP4BP1-201ENST00000556017 ZNF226Q9NYT6 803 aa12.9□□□□□ -0.34
CHMP4BP1-201ENST00000556017 TMEM216Q9P0N5 145 aa12.9□□□□□ -0.34
CHMP4BP1-201ENST00000556017 PPP4R1LQ9P1A2 415 aa12.9□□□□□ -0.34
CHMP4BP1-201ENST00000556017 C19orf53Q9UNZ5 99 aaPredicted RBP12.9□□□□□ -0.34
CHMP4BP1-201ENST00000556017 ZNF175Q9Y473 711 aa12.9□□□□□ -0.34
CHMP4BP1-201ENST00000556017 CADP27708 2225 aa12.89□□□□□ -0.35
CHMP4BP1-201ENST00000556017 A0A087WV62 115 aa12.89□□□□□ -0.35
CHMP4BP1-201ENST00000556017 FAM171A2A8MVW0 826 aa12.89□□□□□ -0.35
CHMP4BP1-201ENST00000556017 SHISA8B8ZZ34 492 aa12.89□□□□□ -0.35
CHMP4BP1-201ENST00000556017 INAFM1C9JVW0 142 aa12.89□□□□□ -0.35
CHMP4BP1-201ENST00000556017 C16orf97H3BN30 126 aa12.89□□□□□ -0.35
CHMP4BP1-201ENST00000556017 UPK1AO00322 258 aa12.89□□□□□ -0.35
CHMP4BP1-201ENST00000556017 SMAD7O15105 426 aaKnown RBP12.89□□□□□ -0.35
CHMP4BP1-201ENST00000556017 IGKV1D-16P01601 117 aa12.89□□□□□ -0.35
CHMP4BP1-201ENST00000556017 INHBAP08476 426 aa12.89□□□□□ -0.35
CHMP4BP1-201ENST00000556017 POU2F1P14859 743 aa12.89□□□□□ -0.35
CHMP4BP1-201ENST00000556017 PAX1P15863 534 aa12.89□□□□□ -0.35
CHMP4BP1-201ENST00000556017 PHBP35232 272 aa12.89□□□□□ -0.35
CHMP4BP1-201ENST00000556017 ETF1P62495 437 aaKnown RBP12.89□□□□□ -0.35
CHMP4BP1-201ENST00000556017 RASA2Q15283 850 aa12.89□□□□□ -0.35
CHMP4BP1-201ENST00000556017 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.89□□□□□ -0.35
CHMP4BP1-201ENST00000556017 P4HA3Q7Z4N8 544 aa12.89□□□□□ -0.35
CHMP4BP1-201ENST00000556017 MARCH3Q86UD3 253 aa12.89□□□□□ -0.35
CHMP4BP1-201ENST00000556017 METTL25Q8N6Q8 603 aa12.89□□□□□ -0.35
CHMP4BP1-201ENST00000556017 UHMK1Q8TAS1 419 aaKnown RBP12.89□□□□□ -0.35
CHMP4BP1-201ENST00000556017 C1GALT1C1Q96EU7 318 aa12.89□□□□□ -0.35
CHMP4BP1-201ENST00000556017 ZC3HAV1LQ96H79 300 aaKnown RBP12.89□□□□□ -0.35
CHMP4BP1-201ENST00000556017 ADGRG7Q96K78 797 aa12.89□□□□□ -0.35
CHMP4BP1-201ENST00000556017 CCL19Q99731 98 aa12.89□□□□□ -0.35
CHMP4BP1-201ENST00000556017 NMRK1Q9NWW6 199 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 146.2 ms