RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 PCDHGB7Q9Y5F8 929 aa11.5□□□□□ -0.57
SHMT2-221ENST00000555773 PTPRQQ9UMZ3 2332 aa11.5□□□□□ -0.57
SHMT2-221ENST00000555773 A0A0G2JPF8 293 aa11.49□□□□□ -0.57
SHMT2-221ENST00000555773 PRAMEF27A3QJZ7 478 aa11.49□□□□□ -0.57
SHMT2-221ENST00000555773 FAM220BPB1ANY3 271 aa11.49□□□□□ -0.57
SHMT2-221ENST00000555773 HNRNPCL2B2RXH8 293 aa11.49□□□□□ -0.57
SHMT2-221ENST00000555773 HNRNPCL3B7ZW38 293 aa11.49□□□□□ -0.57
SHMT2-221ENST00000555773 C5orf58C9J3I9 102 aa11.49□□□□□ -0.57
SHMT2-221ENST00000555773 MKRN2OSH3BPM6 223 aa11.49□□□□□ -0.57
SHMT2-221ENST00000555773 GSC2O15499 205 aa11.49□□□□□ -0.57
SHMT2-221ENST00000555773 SLC28A2O43868 658 aa11.49□□□□□ -0.57
SHMT2-221ENST00000555773 HS6ST1O60243 411 aa11.49□□□□□ -0.57
SHMT2-221ENST00000555773 TSPAN2O60636 221 aa11.49□□□□□ -0.57
SHMT2-221ENST00000555773 DNAJC8O75937 253 aaPredicted RBP11.49□□□□□ -0.57
SHMT2-221ENST00000555773 NUDT7P0C024 238 aa11.49□□□□□ -0.57
SHMT2-221ENST00000555773 HNRNPCL4P0DMR1 293 aa11.49□□□□□ -0.57
SHMT2-221ENST00000555773 ARAFP10398 606 aa11.49□□□□□ -0.57
SHMT2-221ENST00000555773 HSD17B1P14061 328 aa11.49□□□□□ -0.57
SHMT2-221ENST00000555773 ATP6V1C1P21283 382 aa11.49□□□□□ -0.57
SHMT2-221ENST00000555773 CYB561P49447 251 aa11.49□□□□□ -0.57
SHMT2-221ENST00000555773 CRISP3P54108 245 aa11.49□□□□□ -0.57
SHMT2-221ENST00000555773 RPP38P78345 283 aaKnown RBP11.49□□□□□ -0.57
SHMT2-221ENST00000555773 HPCAP84074 193 aa11.49□□□□□ -0.57
SHMT2-221ENST00000555773 VEZF1Q14119 521 aa11.49□□□□□ -0.57
SHMT2-221ENST00000555773 NNATQ16517 81 aa11.49□□□□□ -0.57
SHMT2-221ENST00000555773 ZSCAN26Q16670 478 aa11.49□□□□□ -0.57
SHMT2-221ENST00000555773 VMACQ2NL98 169 aa11.49□□□□□ -0.57
SHMT2-221ENST00000555773 ZNF791Q3KP31 576 aaPredicted RBP11.49□□□□□ -0.57
SHMT2-221ENST00000555773 GPAT3Q53EU6 434 aa11.49□□□□□ -0.57
SHMT2-221ENST00000555773 REEP3Q6NUK4 255 aa11.49□□□□□ -0.57
SHMT2-221ENST00000555773 IGFL2Q6UWQ7 119 aa11.49□□□□□ -0.57
SHMT2-221ENST00000555773 LYPD8Q6UX82 237 aa11.49□□□□□ -0.57
SHMT2-221ENST00000555773 PTOV1Q86YD1 416 aa11.49□□□□□ -0.57
SHMT2-221ENST00000555773 ZZZ3Q8IYH5 903 aa11.49□□□□□ -0.57
SHMT2-221ENST00000555773 C10orf111Q8N326 155 aa11.49□□□□□ -0.57
SHMT2-221ENST00000555773 OIT3Q8WWZ8 545 aa11.49□□□□□ -0.57
SHMT2-221ENST00000555773 ASB15Q8WXK1 588 aa11.49□□□□□ -0.57
SHMT2-221ENST00000555773 HAS2Q92819 552 aa11.49□□□□□ -0.57
SHMT2-221ENST00000555773 TMCO6Q96DC7 493 aa11.49□□□□□ -0.57
SHMT2-221ENST00000555773 SPACA9Q96E40 222 aaPredicted RBP11.49□□□□□ -0.57
SHMT2-221ENST00000555773 OTUB1Q96FW1 271 aaPredicted RBP11.49□□□□□ -0.57
SHMT2-221ENST00000555773 COL21A1Q96P44 957 aa11.49□□□□□ -0.57
SHMT2-221ENST00000555773 SECISBP2Q96T21 854 aaKnown RBP11.49□□□□□ -0.57
SHMT2-221ENST00000555773 SMAD5Q99717 465 aaKnown RBP11.49□□□□□ -0.57
SHMT2-221ENST00000555773 UTP23Q9BRU9 249 aaKnown RBP11.49□□□□□ -0.57
SHMT2-221ENST00000555773 LRMDAQ9H2I8 198 aa11.49□□□□□ -0.57
SHMT2-221ENST00000555773 ALG2Q9H553 416 aa11.49□□□□□ -0.57
SHMT2-221ENST00000555773 ZBTB20Q9HC78 741 aaPredicted RBP11.49□□□□□ -0.57
SHMT2-221ENST00000555773 BCL2L10Q9HD36 194 aa11.49□□□□□ -0.57
SHMT2-221ENST00000555773 CD300AQ9UGN4 299 aa11.49□□□□□ -0.57
SHMT2-221ENST00000555773 ELOVL7A1L3X0 281 aa11.48□□□□□ -0.57
SHMT2-221ENST00000555773 PRORSD1PA6NEY8 169 aa11.48□□□□□ -0.57
SHMT2-221ENST00000555773 TP53I11O14683 189 aa11.48□□□□□ -0.57
SHMT2-221ENST00000555773 MAN1A2O60476 641 aa11.48□□□□□ -0.57
SHMT2-221ENST00000555773 ZNF354AO60765 605 aaPredicted RBP11.48□□□□□ -0.57
SHMT2-221ENST00000555773 HTR1EP28566 365 aa11.48□□□□□ -0.57
SHMT2-221ENST00000555773 IL12BP29460 328 aa11.48□□□□□ -0.57
SHMT2-221ENST00000555773 CASRP41180 1078 aa11.48□□□□□ -0.57
SHMT2-221ENST00000555773 SOX3P41225 446 aa11.48□□□□□ -0.57
SHMT2-221ENST00000555773 GSK3BP49841 420 aa11.48□□□□□ -0.57
SHMT2-221ENST00000555773 NCALDP61601 193 aa11.48□□□□□ -0.57
SHMT2-221ENST00000555773 SCARB2Q14108 478 aa11.48□□□□□ -0.57
SHMT2-221ENST00000555773 SYPL1Q16563 259 aa11.48□□□□□ -0.57
SHMT2-221ENST00000555773 NTRK2Q16620 822 aa11.48□□□□□ -0.57
SHMT2-221ENST00000555773 INTS11Q5TA45 600 aaKnown RBP11.48□□□□□ -0.57
SHMT2-221ENST00000555773 FIGNL1Q6PIW4 674 aa11.48□□□□□ -0.57
SHMT2-221ENST00000555773 LINC00696Q6ZRV3 163 aa11.48□□□□□ -0.57
SHMT2-221ENST00000555773 ASRGL1Q7L266 308 aa11.48□□□□□ -0.57
SHMT2-221ENST00000555773 IFNEQ86WN2 208 aa11.48□□□□□ -0.57
SHMT2-221ENST00000555773 HPS6Q86YV9 775 aa11.48□□□□□ -0.57
SHMT2-221ENST00000555773 MICU2Q8IYU8 434 aa11.48□□□□□ -0.57
SHMT2-221ENST00000555773 BEST3Q8N1M1 668 aa11.48□□□□□ -0.57
SHMT2-221ENST00000555773 ANKFN1Q8N957 763 aa11.48□□□□□ -0.57
SHMT2-221ENST00000555773 HIPK4Q8NE63 616 aa11.48□□□□□ -0.57
SHMT2-221ENST00000555773 BBS10Q8TAM1 723 aa11.48□□□□□ -0.57
SHMT2-221ENST00000555773 TM9SF4Q92544 642 aa11.48□□□□□ -0.57
SHMT2-221ENST00000555773 MAL2Q969L2 176 aa11.48□□□□□ -0.57
SHMT2-221ENST00000555773 TMEM19Q96HH6 336 aa11.48□□□□□ -0.57
SHMT2-221ENST00000555773 ADOQ96SZ5 270 aa11.48□□□□□ -0.57
SHMT2-221ENST00000555773 KCTD14Q9BQ13 255 aaPredicted RBP11.48□□□□□ -0.57
SHMT2-221ENST00000555773 THTPAQ9BU02 230 aa11.48□□□□□ -0.57
SHMT2-221ENST00000555773 ZNF350Q9GZX5 532 aa11.48□□□□□ -0.57
SHMT2-221ENST00000555773 PRORYQ9H606 182 aa11.48□□□□□ -0.57
SHMT2-221ENST00000555773 PIF1Q9H611 641 aa11.48□□□□□ -0.57
SHMT2-221ENST00000555773 HPF1Q9NWY4 346 aa11.48□□□□□ -0.57
SHMT2-221ENST00000555773 ANGPT4Q9Y264 503 aa11.48□□□□□ -0.57
SHMT2-221ENST00000555773 WDR45Q9Y484 360 aa11.48□□□□□ -0.57
SHMT2-221ENST00000555773 PCSK5Q92824 1860 aa11.48□□□□□ -0.57
SHMT2-221ENST00000555773 GSTA4O15217 222 aa11.47□□□□□ -0.57
SHMT2-221ENST00000555773 RRP9O43818 475 aaKnown RBP11.47□□□□□ -0.57
SHMT2-221ENST00000555773 FCMRO60667 390 aa11.47□□□□□ -0.57
SHMT2-221ENST00000555773 GMNNO75496 209 aa11.47□□□□□ -0.57
SHMT2-221ENST00000555773 PDE9AO76083 593 aa11.47□□□□□ -0.57
SHMT2-221ENST00000555773 OR6B1O95007 311 aa11.47□□□□□ -0.57
SHMT2-221ENST00000555773 PGM3O95394 542 aa11.47□□□□□ -0.57
SHMT2-221ENST00000555773 H6PDO95479 791 aa11.47□□□□□ -0.57
SHMT2-221ENST00000555773 WDPCPO95876 746 aa11.47□□□□□ -0.57
SHMT2-221ENST00000555773 IGKV1D-16P01601 117 aa11.47□□□□□ -0.57
SHMT2-221ENST00000555773 BCHEP06276 602 aa11.47□□□□□ -0.57
SHMT2-221ENST00000555773 NGFRP08138 427 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms