RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 TRPC1P48995 793 aa11.07□□□□□ -0.64
SRP54-206ENST00000555317 SMSP52788 366 aa11.07□□□□□ -0.64
SRP54-206ENST00000555317 GAB1Q13480 694 aa11.07□□□□□ -0.64
SRP54-206ENST00000555317 HSP90B2PQ58FF3 399 aa11.07□□□□□ -0.64
SRP54-206ENST00000555317 TIGD3Q6B0B8 471 aa11.07□□□□□ -0.64
SRP54-206ENST00000555317 OR4F3Q6IEY1 312 aa11.07□□□□□ -0.64
SRP54-206ENST00000555317 MFSD12Q6NUT3 480 aa11.07□□□□□ -0.64
SRP54-206ENST00000555317 ACAD11Q709F0 780 aa11.07□□□□□ -0.64
SRP54-206ENST00000555317 CAMKMTQ7Z624 323 aa11.07□□□□□ -0.64
SRP54-206ENST00000555317 OR4A15Q8NGL6 344 aa11.07□□□□□ -0.64
SRP54-206ENST00000555317 SFXN5Q8TD22 340 aa11.07□□□□□ -0.64
SRP54-206ENST00000555317 TESCQ96BS2 214 aa11.07□□□□□ -0.64
SRP54-206ENST00000555317 C7orf26Q96N11 449 aa11.07□□□□□ -0.64
SRP54-206ENST00000555317 GNRHR2Q96P88 292 aa11.07□□□□□ -0.64
SRP54-206ENST00000555317 TBL1XR1Q9BZK7 514 aa11.07□□□□□ -0.64
SRP54-206ENST00000555317 TP63Q9H3D4 680 aaPredicted RBP11.07□□□□□ -0.64
SRP54-206ENST00000555317 WDR55Q9H6Y2 383 aaPredicted RBP11.07□□□□□ -0.64
SRP54-206ENST00000555317 SDHAF3Q9NRP4 125 aa11.07□□□□□ -0.64
SRP54-206ENST00000555317 PLSCR2Q9NRY7 297 aa11.07□□□□□ -0.64
SRP54-206ENST00000555317 AIG1Q9NVV5 245 aa11.07□□□□□ -0.64
SRP54-206ENST00000555317 NTMQ9P121 344 aa11.07□□□□□ -0.64
SRP54-206ENST00000555317 PPP4R1LQ9P1A2 415 aa11.07□□□□□ -0.64
SRP54-206ENST00000555317 ABCG2Q9UNQ0 655 aa11.07□□□□□ -0.64
SRP54-206ENST00000555317 PCDHGB3Q9Y5G1 929 aa11.07□□□□□ -0.64
SRP54-206ENST00000555317 WIF1Q9Y5W5 379 aa11.07□□□□□ -0.64
SRP54-206ENST00000555317 LIPGQ9Y5X9 500 aa11.07□□□□□ -0.64
SRP54-206ENST00000555317 C15orf38-AP3S2A0A0A6YYH1 394 aa11.06□□□□□ -0.64
SRP54-206ENST00000555317 A1L4Q6 167 aa11.06□□□□□ -0.64
SRP54-206ENST00000555317 E9PBE3 544 aa11.06□□□□□ -0.64
SRP54-206ENST00000555317 RNASET2O00584 256 aaKnown RBP11.06□□□□□ -0.64
SRP54-206ENST00000555317 SNPHO15079 494 aa11.06□□□□□ -0.64
SRP54-206ENST00000555317 SCO2O43819 266 aa11.06□□□□□ -0.64
SRP54-206ENST00000555317 SOX30O94993 753 aa11.06□□□□□ -0.64
SRP54-206ENST00000555317 IL33O95760 270 aa11.06□□□□□ -0.64
SRP54-206ENST00000555317 HMGN2P05204 90 aaKnown RBP11.06□□□□□ -0.64
SRP54-206ENST00000555317 CYP4B1P13584 511 aa11.06□□□□□ -0.64
SRP54-206ENST00000555317 HPGDP15428 266 aa11.06□□□□□ -0.64
SRP54-206ENST00000555317 S100A3P33764 101 aa11.06□□□□□ -0.64
SRP54-206ENST00000555317 LASP1Q14847 261 aaKnown RBP11.06□□□□□ -0.64
SRP54-206ENST00000555317 FAM174BQ3ZCQ3 159 aa11.06□□□□□ -0.64
SRP54-206ENST00000555317 WLSQ5T9L3 541 aa11.06□□□□□ -0.64
SRP54-206ENST00000555317 DESI1Q6ICB0 168 aa11.06□□□□□ -0.64
SRP54-206ENST00000555317 ZNF585AQ6P3V2 769 aa11.06□□□□□ -0.64
SRP54-206ENST00000555317 FGD2Q7Z6J4 655 aa11.06□□□□□ -0.64
SRP54-206ENST00000555317 DOLPP1Q86YN1 238 aa11.06□□□□□ -0.64
SRP54-206ENST00000555317 OR4K17Q8NGC6 315 aa11.06□□□□□ -0.64
SRP54-206ENST00000555317 OR8J2Q8NGG1 315 aa11.06□□□□□ -0.64
SRP54-206ENST00000555317 OR5AK3PQ8NH89 298 aa11.06□□□□□ -0.64
SRP54-206ENST00000555317 NEIL3Q8TAT5 605 aa11.06□□□□□ -0.64
SRP54-206ENST00000555317 ACTRT2Q8TDY3 377 aa11.06□□□□□ -0.64
SRP54-206ENST00000555317 ADAMTS15Q8TE58 950 aa11.06□□□□□ -0.64
SRP54-206ENST00000555317 NUDT8Q8WV74 236 aa11.06□□□□□ -0.64
SRP54-206ENST00000555317 PIK3R3Q92569 461 aa11.06□□□□□ -0.64
SRP54-206ENST00000555317 CCDC120Q96HB5 630 aa11.06□□□□□ -0.64
SRP54-206ENST00000555317 YIPF4Q9BSR8 244 aa11.06□□□□□ -0.64
SRP54-206ENST00000555317 G6PC3Q9BUM1 346 aa11.06□□□□□ -0.64
SRP54-206ENST00000555317 ACTRT3Q9BYD9 372 aa11.06□□□□□ -0.64
SRP54-206ENST00000555317 SLC6A15Q9H2J7 730 aa11.06□□□□□ -0.64
SRP54-206ENST00000555317 CXorf36Q9H7Y0 433 aa11.06□□□□□ -0.64
SRP54-206ENST00000555317 HHATLQ9HCP6 504 aa11.06□□□□□ -0.64
SRP54-206ENST00000555317 ACKR4Q9NPB9 350 aa11.06□□□□□ -0.64
SRP54-206ENST00000555317 SERHLQ9NQF3 203 aa11.06□□□□□ -0.64
SRP54-206ENST00000555317 SIRT3Q9NTG7 399 aaPredicted RBP11.06□□□□□ -0.64
SRP54-206ENST00000555317 FAM120CQ9NX05 1096 aaKnown RBP11.06□□□□□ -0.64
SRP54-206ENST00000555317 DKKL1Q9UK85 242 aa11.06□□□□□ -0.64
SRP54-206ENST00000555317 MEMO1Q9Y316 297 aa11.06□□□□□ -0.64
SRP54-206ENST00000555317 USH1CQ9Y6N9 552 aa11.06□□□□□ -0.64
SRP54-206ENST00000555317 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.05□□□□□ -0.64
SRP54-206ENST00000555317 RNF103-CHMP3A0A140T963 221 aa11.05□□□□□ -0.64
SRP54-206ENST00000555317 A0A1B0GVC2 190 aa11.05□□□□□ -0.64
SRP54-206ENST00000555317 PRSS51A0A1B0GVH4 220 aa11.05□□□□□ -0.64
SRP54-206ENST00000555317 GXYLT2A0PJZ3 443 aa11.05□□□□□ -0.64
SRP54-206ENST00000555317 C2orf72A6NCS6 295 aa11.05□□□□□ -0.64
SRP54-206ENST00000555317 E9PLN8 166 aa11.05□□□□□ -0.64
SRP54-206ENST00000555317 UBDO15205 165 aa11.05□□□□□ -0.64
SRP54-206ENST00000555317 POLR3GO15318 223 aaPredicted RBP11.05□□□□□ -0.64
SRP54-206ENST00000555317 CBR3O75828 277 aa11.05□□□□□ -0.64
SRP54-206ENST00000555317 SASH3O75995 380 aa11.05□□□□□ -0.64
SRP54-206ENST00000555317 NKX2-2O95096 273 aa11.05□□□□□ -0.64
SRP54-206ENST00000555317 UTS2O95399 124 aa11.05□□□□□ -0.64
SRP54-206ENST00000555317 CPSF4O95639 269 aaKnown RBP11.05□□□□□ -0.64
SRP54-206ENST00000555317 HPNP05981 417 aa11.05□□□□□ -0.64
SRP54-206ENST00000555317 ALDOCP09972 364 aaKnown RBP11.05□□□□□ -0.64
SRP54-206ENST00000555317 ATP6V1C1P21283 382 aa11.05□□□□□ -0.64
SRP54-206ENST00000555317 STX1BP61266 288 aa11.05□□□□□ -0.64
SRP54-206ENST00000555317 HBA1P69905 142 aa11.05□□□□□ -0.64
SRP54-206ENST00000555317 POU6F2P78424 691 aaPredicted RBP11.05□□□□□ -0.64
SRP54-206ENST00000555317 STX5Q13190 355 aa11.05□□□□□ -0.64
SRP54-206ENST00000555317 GSTA3Q16772 222 aa11.05□□□□□ -0.64
SRP54-206ENST00000555317 SLC9B1Q4ZJI4 515 aa11.05□□□□□ -0.64
SRP54-206ENST00000555317 SPANXN4Q5MJ08 99 aa11.05□□□□□ -0.64
SRP54-206ENST00000555317 TMEM211Q6ICI0 200 aa11.05□□□□□ -0.64
SRP54-206ENST00000555317 C3P1Q6ZMU1 363 aa11.05□□□□□ -0.64
SRP54-206ENST00000555317 ANKRD46Q86W74 232 aa11.05□□□□□ -0.64
SRP54-206ENST00000555317 PLCZ1Q86YW0 608 aa11.05□□□□□ -0.64
SRP54-206ENST00000555317 CHERPQ8IWX8 916 aaKnown RBP11.05□□□□□ -0.64
SRP54-206ENST00000555317 TRIML2Q8N7C3 387 aa11.05□□□□□ -0.64
SRP54-206ENST00000555317 GLB1L3Q8NCI6 653 aaPredicted RBP11.05□□□□□ -0.64
SRP54-206ENST00000555317 SLC16A11Q8NCK7 471 aa11.05□□□□□ -0.64
SRP54-206ENST00000555317 OR5M9Q8NGP3 310 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms