RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 RORAP35398 523 aa8.27□□□□□ -1.08
TDP1-210ENST00000554976 ARRB1P49407 418 aaPredicted RBP8.27□□□□□ -1.08
TDP1-210ENST00000554976 ARPC4P59998 168 aa8.27□□□□□ -1.08
TDP1-210ENST00000554976 CXCR4P61073 352 aa8.27□□□□□ -1.08
TDP1-210ENST00000554976 NR0B2Q15466 257 aa8.27□□□□□ -1.08
TDP1-210ENST00000554976 INAQ16352 499 aa8.27□□□□□ -1.08
TDP1-210ENST00000554976 GPAT3Q53EU6 434 aa8.27□□□□□ -1.08
TDP1-210ENST00000554976 GTF2IRD2BQ6EKJ0 949 aa8.27□□□□□ -1.08
TDP1-210ENST00000554976 Q6ZPB1 254 aaPredicted RBP8.27□□□□□ -1.08
TDP1-210ENST00000554976 SZRD1Q7Z422 152 aa8.27□□□□□ -1.08
TDP1-210ENST00000554976 ZAR1Q86SH2 424 aa8.27□□□□□ -1.08
TDP1-210ENST00000554976 GTF2IRD2Q86UP8 949 aa8.27□□□□□ -1.08
TDP1-210ENST00000554976 KRT73Q86Y46 540 aa8.27□□□□□ -1.08
TDP1-210ENST00000554976 ZNF619Q8N2I2 560 aa8.27□□□□□ -1.08
TDP1-210ENST00000554976 VWA5B2Q8N398 1253 aa8.27□□□□□ -1.08
TDP1-210ENST00000554976 SLC7A13Q8TCU3 470 aa8.27□□□□□ -1.08
TDP1-210ENST00000554976 ADAMTS15Q8TE58 950 aa8.27□□□□□ -1.08
TDP1-210ENST00000554976 DOK4Q8TEW6 326 aa8.27□□□□□ -1.08
TDP1-210ENST00000554976 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.27□□□□□ -1.08
TDP1-210ENST00000554976 PIK3R3Q92569 461 aa8.27□□□□□ -1.08
TDP1-210ENST00000554976 COL26A1Q96A83 441 aa8.27□□□□□ -1.08
TDP1-210ENST00000554976 TMIGD2Q96BF3 282 aa8.27□□□□□ -1.08
TDP1-210ENST00000554976 RBCK1Q9BYM8 510 aa8.27□□□□□ -1.08
TDP1-210ENST00000554976 FOLH1BQ9HBA9 442 aa8.27□□□□□ -1.08
TDP1-210ENST00000554976 SIDT1Q9NXL6 827 aaKnown RBP8.27□□□□□ -1.08
TDP1-210ENST00000554976 QPCTLQ9NXS2 382 aa8.27□□□□□ -1.08
TDP1-210ENST00000554976 ZNF226Q9NYT6 803 aa8.27□□□□□ -1.08
TDP1-210ENST00000554976 RNF6Q9Y252 685 aa8.27□□□□□ -1.08
TDP1-210ENST00000554976 hCG_2014768A0A024R1R8 64 aa8.27□□□□□ -1.09
TDP1-210ENST00000554976 TMEM150CB9EJG8 249 aa8.27□□□□□ -1.09
TDP1-210ENST00000554976 BCAS1O75363 584 aaPredicted RBP8.27□□□□□ -1.09
TDP1-210ENST00000554976 UGT2B17O75795 530 aa8.27□□□□□ -1.09
TDP1-210ENST00000554976 CYP4B1P13584 511 aa8.27□□□□□ -1.09
TDP1-210ENST00000554976 NT5EP21589 574 aa8.27□□□□□ -1.09
TDP1-210ENST00000554976 AVPR1BP47901 424 aa8.27□□□□□ -1.09
TDP1-210ENST00000554976 NUP107P57740 925 aa8.27□□□□□ -1.09
TDP1-210ENST00000554976 RPP38P78345 283 aaKnown RBP8.27□□□□□ -1.09
TDP1-210ENST00000554976 EFNB1P98172 346 aa8.27□□□□□ -1.09
TDP1-210ENST00000554976 ERV3-1Q14264 604 aa8.27□□□□□ -1.09
TDP1-210ENST00000554976 ZNF311Q5JNZ3 666 aa8.27□□□□□ -1.09
TDP1-210ENST00000554976 YOD1Q5VVQ6 348 aaPredicted RBP8.27□□□□□ -1.09
TDP1-210ENST00000554976 ZNF773Q6PK81 442 aa8.27□□□□□ -1.09
TDP1-210ENST00000554976 QSOX2Q6ZRP7 698 aa8.27□□□□□ -1.09
TDP1-210ENST00000554976 PEX5LQ8IYB4 626 aa8.27□□□□□ -1.09
TDP1-210ENST00000554976 Q8N9G6 341 aaPredicted RBP8.27□□□□□ -1.09
TDP1-210ENST00000554976 DTWD2Q8NBA8 298 aa8.27□□□□□ -1.09
TDP1-210ENST00000554976 OR52P1PQ8NH57 321 aa8.27□□□□□ -1.09
TDP1-210ENST00000554976 VANGL1Q8TAA9 524 aaPredicted RBP8.27□□□□□ -1.09
TDP1-210ENST00000554976 CNIH3Q8TBE1 160 aa8.27□□□□□ -1.09
TDP1-210ENST00000554976 PTPMT1Q8WUK0 201 aaPredicted RBP8.27□□□□□ -1.09
TDP1-210ENST00000554976 ZNF578Q96N58 590 aaPredicted RBP8.27□□□□□ -1.09
TDP1-210ENST00000554976 OR1F2PQ96R84 312 aa8.27□□□□□ -1.09
TDP1-210ENST00000554976 GPA33Q99795 319 aa8.27□□□□□ -1.09
TDP1-210ENST00000554976 RIBC2Q9H4K1 309 aa8.27□□□□□ -1.09
TDP1-210ENST00000554976 MTHFD2LQ9H903 347 aaPredicted RBP8.27□□□□□ -1.09
TDP1-210ENST00000554976 PRTFDC1Q9NRG1 225 aa8.27□□□□□ -1.09
TDP1-210ENST00000554976 SOHLH2Q9NX45 425 aa8.27□□□□□ -1.09
TDP1-210ENST00000554976 PTTG2Q9NZH5 202 aa8.27□□□□□ -1.09
TDP1-210ENST00000554976 SLC6A14Q9UN76 642 aa8.27□□□□□ -1.09
TDP1-210ENST00000554976 PCDHGB1Q9Y5G3 927 aa8.27□□□□□ -1.09
TDP1-210ENST00000554976 A0A087WXM4 84 aa8.27□□□□□ -1.09
TDP1-210ENST00000554976 OR2W5A6NFC9 320 aa8.27□□□□□ -1.09
TDP1-210ENST00000554976 M0R296 226 aa8.27□□□□□ -1.09
TDP1-210ENST00000554976 DSCR3O14972 297 aa8.27□□□□□ -1.09
TDP1-210ENST00000554976 SEC24DO94855 1032 aaPredicted RBP8.27□□□□□ -1.09
TDP1-210ENST00000554976 KCNK2O95069 426 aa8.27□□□□□ -1.09
TDP1-210ENST00000554976 ADAP00813 363 aa8.27□□□□□ -1.09
TDP1-210ENST00000554976 H1F0P07305 194 aaKnown RBP8.27□□□□□ -1.09
TDP1-210ENST00000554976 CCDC159P0C7I6 412 aa8.27□□□□□ -1.09
TDP1-210ENST00000554976 CT45A8P0DMV1 189 aa8.27□□□□□ -1.09
TDP1-210ENST00000554976 CT45A9P0DMV2 189 aa8.27□□□□□ -1.09
TDP1-210ENST00000554976 LSM11P83369 360 aaKnown RBP eCLIP8.27□□□□□ -1.09
TDP1-210ENST00000554976 PIN1Q13526 163 aaPredicted RBP8.27□□□□□ -1.09
TDP1-210ENST00000554976 CT45A2Q5DJT8 189 aa8.27□□□□□ -1.09
TDP1-210ENST00000554976 CCNJQ5T5M9 372 aa8.27□□□□□ -1.09
TDP1-210ENST00000554976 ZNF385CQ66K41 422 aaPredicted RBP8.27□□□□□ -1.09
TDP1-210ENST00000554976 DBX2Q6ZNG2 339 aa8.27□□□□□ -1.09
TDP1-210ENST00000554976 CCDC103Q8IW40 242 aa8.27□□□□□ -1.09
TDP1-210ENST00000554976 GALNT12Q8IXK2 581 aa8.27□□□□□ -1.09
TDP1-210ENST00000554976 NR4A3Q92570 626 aa8.27□□□□□ -1.09
TDP1-210ENST00000554976 MMABQ96EY8 250 aaPredicted RBP8.27□□□□□ -1.09
TDP1-210ENST00000554976 ALOXE3Q9BYJ1 711 aa8.27□□□□□ -1.09
TDP1-210ENST00000554976 ANKRD19PQ9H560 264 aa8.27□□□□□ -1.09
TDP1-210ENST00000554976 DUSP21Q9H596 190 aa8.27□□□□□ -1.09
TDP1-210ENST00000554976 SLC22A11Q9NSA0 550 aa8.27□□□□□ -1.09
TDP1-210ENST00000554976 SEMA4GQ9NTN9 838 aa8.27□□□□□ -1.09
TDP1-210ENST00000554976 FAIMQ9NVQ4 179 aa8.27□□□□□ -1.09
TDP1-210ENST00000554976 IFT52Q9Y366 437 aa8.27□□□□□ -1.09
TDP1-210ENST00000554976 PI4KAP42356 2102 aa8.26□□□□□ -1.09
TDP1-210ENST00000554976 CLDN24A6NM45 220 aa8.26□□□□□ -1.09
TDP1-210ENST00000554976 PATE3B3GLJ2 98 aa8.26□□□□□ -1.09
TDP1-210ENST00000554976 AK1P00568 194 aa8.26□□□□□ -1.09
TDP1-210ENST00000554976 IGKV3-11P04433 115 aa8.26□□□□□ -1.09
TDP1-210ENST00000554976 ALOX5P09917 674 aa8.26□□□□□ -1.09
TDP1-210ENST00000554976 ATP6V1B1P15313 513 aa8.26□□□□□ -1.09
TDP1-210ENST00000554976 SSTR4P31391 388 aa8.26□□□□□ -1.09
TDP1-210ENST00000554976 SLC35A2P78381 396 aa8.26□□□□□ -1.09
TDP1-210ENST00000554976 BIKQ13323 160 aa8.26□□□□□ -1.09
TDP1-210ENST00000554976 DSG2Q14126 1118 aa8.26□□□□□ -1.09
TDP1-210ENST00000554976 PRAMEF17Q5VTA0 474 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms