RNA–Protein interactions for RNA: ENST00000554975.5

SHMT2-216, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-216ENST00000554975 CYP4Z1Q86W10 505 aa10.38□□□□□ -0.75
SHMT2-216ENST00000554975 TMEM151BQ8IW70 566 aa10.38□□□□□ -0.75
SHMT2-216ENST00000554975 C10orf111Q8N326 155 aa10.38□□□□□ -0.75
SHMT2-216ENST00000554975 SRFBP1Q8NEF9 429 aaKnown RBP10.38□□□□□ -0.75
SHMT2-216ENST00000554975 OR5AR1Q8NGP9 310 aa10.38□□□□□ -0.75
SHMT2-216ENST00000554975 SPPL2AQ8TCT8 520 aa10.38□□□□□ -0.75
SHMT2-216ENST00000554975 RGMAQ96B86 450 aa10.38□□□□□ -0.75
SHMT2-216ENST00000554975 ZNF501Q96CX3 271 aaPredicted RBP10.38□□□□□ -0.75
SHMT2-216ENST00000554975 NEURL3Q96EH8 262 aa10.38□□□□□ -0.75
SHMT2-216ENST00000554975 TPD52L3Q96J77 140 aa10.38□□□□□ -0.75
SHMT2-216ENST00000554975 COG8Q96MW5 612 aa10.38□□□□□ -0.75
SHMT2-216ENST00000554975 RAB33BQ9H082 229 aa10.38□□□□□ -0.75
SHMT2-216ENST00000554975 OR51B5Q9H339 312 aa10.38□□□□□ -0.75
SHMT2-216ENST00000554975 SOX17Q9H6I2 414 aaPredicted RBP10.38□□□□□ -0.75
SHMT2-216ENST00000554975 ZNF552Q9H707 407 aaPredicted RBP10.38□□□□□ -0.75
SHMT2-216ENST00000554975 FANCEQ9HB96 536 aa10.38□□□□□ -0.75
SHMT2-216ENST00000554975 PLGRKTQ9HBL7 147 aa10.38□□□□□ -0.75
SHMT2-216ENST00000554975 ACSS1Q9NUB1 689 aaPredicted RBP10.38□□□□□ -0.75
SHMT2-216ENST00000554975 EXD2Q9NVH0 621 aa10.38□□□□□ -0.75
SHMT2-216ENST00000554975 ACANP16112 2415 aa10.38□□□□□ -0.75
SHMT2-216ENST00000554975 TRBC2A0A5B9 178 aa10.37□□□□□ -0.75
SHMT2-216ENST00000554975 TLCD2A6NGC4 264 aa10.37□□□□□ -0.75
SHMT2-216ENST00000554975 TNFRSF11BO00300 401 aa10.37□□□□□ -0.75
SHMT2-216ENST00000554975 SLC22A1O15245 554 aa10.37□□□□□ -0.75
SHMT2-216ENST00000554975 MPZL2O60487 215 aa10.37□□□□□ -0.75
SHMT2-216ENST00000554975 BCL10O95999 233 aa10.37□□□□□ -0.75
SHMT2-216ENST00000554975 IFNW1P05000 195 aa10.37□□□□□ -0.75
SHMT2-216ENST00000554975 KLK1P06870 262 aa10.37□□□□□ -0.75
SHMT2-216ENST00000554975 RAB40ALP0C0E4 278 aa10.37□□□□□ -0.75
SHMT2-216ENST00000554975 CDH3P22223 829 aa10.37□□□□□ -0.75
SHMT2-216ENST00000554975 PKLRP30613 574 aa10.37□□□□□ -0.75
SHMT2-216ENST00000554975 SERPINB10P48595 397 aa10.37□□□□□ -0.75
SHMT2-216ENST00000554975 SMIM11AP58511 58 aa10.37□□□□□ -0.75
SHMT2-216ENST00000554975 SPIBQ01892 262 aa10.37□□□□□ -0.75
SHMT2-216ENST00000554975 C11orf91Q3C1V1 193 aa10.37□□□□□ -0.75
SHMT2-216ENST00000554975 ANKRD26P1Q6NSI1 321 aa10.37□□□□□ -0.75
SHMT2-216ENST00000554975 REEP3Q6NUK4 255 aa10.37□□□□□ -0.75
SHMT2-216ENST00000554975 IGFL3Q6UXB1 125 aa10.37□□□□□ -0.75
SHMT2-216ENST00000554975 Q6ZS92 163 aa10.37□□□□□ -0.75
SHMT2-216ENST00000554975 P3H2Q8IVL5 708 aa10.37□□□□□ -0.75
SHMT2-216ENST00000554975 ZNF295-AS1Q8N0V1 137 aa10.37□□□□□ -0.75
SHMT2-216ENST00000554975 SPARTQ8N0X7 666 aa10.37□□□□□ -0.75
SHMT2-216ENST00000554975 TAGAPQ8N103 731 aa10.37□□□□□ -0.75
SHMT2-216ENST00000554975 OR4K1Q8NGD4 311 aa10.37□□□□□ -0.75
SHMT2-216ENST00000554975 OR52E1Q8NGJ3 308 aa10.37□□□□□ -0.75
SHMT2-216ENST00000554975 OR2L8Q8NGY9 312 aa10.37□□□□□ -0.75
SHMT2-216ENST00000554975 SFXN5Q8TD22 340 aa10.37□□□□□ -0.75
SHMT2-216ENST00000554975 NR4A3Q92570 626 aa10.37□□□□□ -0.75
SHMT2-216ENST00000554975 RORBQ92753 470 aa10.37□□□□□ -0.75
SHMT2-216ENST00000554975 BORCS5Q969J3 196 aa10.37□□□□□ -0.75
SHMT2-216ENST00000554975 TMIGD2Q96BF3 282 aa10.37□□□□□ -0.75
SHMT2-216ENST00000554975 ZNF300Q96RE9 604 aaPredicted RBP10.37□□□□□ -0.75
SHMT2-216ENST00000554975 CD180Q99467 661 aa10.37□□□□□ -0.75
SHMT2-216ENST00000554975 XKR8Q9H6D3 395 aa10.37□□□□□ -0.75
SHMT2-216ENST00000554975 A4GALTQ9NPC4 353 aa10.37□□□□□ -0.75
SHMT2-216ENST00000554975 GIMAP4Q9NUV9 329 aa10.37□□□□□ -0.75
SHMT2-216ENST00000554975 TBC1D23Q9NUY8 699 aa10.37□□□□□ -0.75
SHMT2-216ENST00000554975 WARS2Q9UGM6 360 aaKnown RBP10.37□□□□□ -0.75
SHMT2-216ENST00000554975 NDRG4Q9ULP0 352 aaKnown RBP10.37□□□□□ -0.75
SHMT2-216ENST00000554975 U3KQV3 271 aa10.37□□□□□ -0.75
SHMT2-216ENST00000554975 ZNF99A8MXY4 864 aaPredicted RBP10.36□□□□□ -0.75
SHMT2-216ENST00000554975 MEN1O00255 615 aa10.36□□□□□ -0.75
SHMT2-216ENST00000554975 PLPP1O14494 284 aa10.36□□□□□ -0.75
SHMT2-216ENST00000554975 RGS10O43665 173 aa10.36□□□□□ -0.75
SHMT2-216ENST00000554975 FAM20BO75063 409 aa10.36□□□□□ -0.75
SHMT2-216ENST00000554975 OXSR1O95747 527 aaPredicted RBP10.36□□□□□ -0.75
SHMT2-216ENST00000554975 B3GALT4O96024 378 aa10.36□□□□□ -0.75
SHMT2-216ENST00000554975 ETFAP13804 333 aa10.36□□□□□ -0.75
SHMT2-216ENST00000554975 HOXB4P17483 251 aaPredicted RBP10.36□□□□□ -0.75
SHMT2-216ENST00000554975 RHCEP18577 417 aa10.36□□□□□ -0.75
SHMT2-216ENST00000554975 PCSK6P29122 969 aa10.36□□□□□ -0.75
SHMT2-216ENST00000554975 TPP2P29144 1249 aaPredicted RBP10.36□□□□□ -0.75
SHMT2-216ENST00000554975 RRM2P31350 389 aa10.36□□□□□ -0.75
SHMT2-216ENST00000554975 RORAP35398 523 aa10.36□□□□□ -0.75
SHMT2-216ENST00000554975 FRKP42685 505 aaPredicted RBP10.36□□□□□ -0.75
SHMT2-216ENST00000554975 KHKP50053 298 aa10.36□□□□□ -0.75
SHMT2-216ENST00000554975 ST13P50502 369 aaKnown RBP10.36□□□□□ -0.75
SHMT2-216ENST00000554975 DAPP51397 102 aa10.36□□□□□ -0.75
SHMT2-216ENST00000554975 PCBP3P57721 371 aaKnown RBP10.36□□□□□ -0.75
SHMT2-216ENST00000554975 IL1RL1Q01638 556 aa10.36□□□□□ -0.75
SHMT2-216ENST00000554975 ACY1Q03154 408 aa10.36□□□□□ -0.75
SHMT2-216ENST00000554975 CDK5R2Q13319 367 aa10.36□□□□□ -0.75
SHMT2-216ENST00000554975 MAD2L1BPQ15013 274 aaPredicted RBP10.36□□□□□ -0.75
SHMT2-216ENST00000554975 SPDYE7PQ495Y7 208 aa10.36□□□□□ -0.75
SHMT2-216ENST00000554975 SAXO2Q658L1 398 aa10.36□□□□□ -0.75
SHMT2-216ENST00000554975 ADNP2Q6IQ32 1131 aa10.36□□□□□ -0.75
SHMT2-216ENST00000554975 TMEM64Q6YI46 380 aa10.36□□□□□ -0.75
SHMT2-216ENST00000554975 PRSS48Q7RTY5 328 aa10.36□□□□□ -0.75
SHMT2-216ENST00000554975 VTCN1Q7Z7D3 282 aa10.36□□□□□ -0.75
SHMT2-216ENST00000554975 TMEM179BQ7Z7N9 219 aa10.36□□□□□ -0.75
SHMT2-216ENST00000554975 AMIGO1Q86WK6 493 aa10.36□□□□□ -0.75
SHMT2-216ENST00000554975 KRT73Q86Y46 540 aa10.36□□□□□ -0.75
SHMT2-216ENST00000554975 HS3ST5Q8IZT8 346 aa10.36□□□□□ -0.75
SHMT2-216ENST00000554975 PARP8Q8N3A8 854 aa10.36□□□□□ -0.75
SHMT2-216ENST00000554975 D2HGDHQ8N465 521 aa10.36□□□□□ -0.75
SHMT2-216ENST00000554975 LINC00471Q8N535 108 aa10.36□□□□□ -0.75
SHMT2-216ENST00000554975 OR10G2Q8NGC3 310 aa10.36□□□□□ -0.75
SHMT2-216ENST00000554975 NFKBIDQ8NI38 313 aa10.36□□□□□ -0.75
SHMT2-216ENST00000554975 GRHL3Q8TE85 626 aa10.36□□□□□ -0.75
SHMT2-216ENST00000554975 ITLN2Q8WWU7 325 aaPredicted RBP10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms