RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 CBLN3Q6UW01 205 aa2.46□□□□□ -2.02
SCFD1-213ENST00000554776 BTNL3Q6UXE8 466 aa2.46□□□□□ -2.02
SCFD1-213ENST00000554776 SLC25A42Q86VD7 318 aa2.46□□□□□ -2.02
SCFD1-213ENST00000554776 SLC47A2Q86VL8 602 aa2.46□□□□□ -2.02
SCFD1-213ENST00000554776 ARL6IP6Q8N6S5 226 aa2.46□□□□□ -2.02
SCFD1-213ENST00000554776 FADS6Q8N9I5 356 aa2.46□□□□□ -2.02
SCFD1-213ENST00000554776 STKLD1Q8NE28 680 aa2.46□□□□□ -2.02
SCFD1-213ENST00000554776 OR6T1Q8NGN1 323 aa2.46□□□□□ -2.02
SCFD1-213ENST00000554776 OR10T2Q8NGX3 314 aa2.46□□□□□ -2.02
SCFD1-213ENST00000554776 TBCKQ8TEA7 893 aa2.46□□□□□ -2.02
SCFD1-213ENST00000554776 ITLN1Q8WWA0 313 aa2.46□□□□□ -2.02
SCFD1-213ENST00000554776 CRYGNQ8WXF5 182 aa2.46□□□□□ -2.02
SCFD1-213ENST00000554776 UPRTQ96BW1 309 aa2.46□□□□□ -2.02
SCFD1-213ENST00000554776 C11orf24Q96F05 449 aaPredicted RBP2.46□□□□□ -2.02
SCFD1-213ENST00000554776 PIWIL1Q96J94 861 aaKnown RBP2.46□□□□□ -2.02
SCFD1-213ENST00000554776 ELMO2Q96JJ3 720 aa2.46□□□□□ -2.02
SCFD1-213ENST00000554776 TBC1D10AQ9BXI6 508 aa2.46□□□□□ -2.02
SCFD1-213ENST00000554776 TRIM6Q9C030 488 aaPredicted RBP2.46□□□□□ -2.02
SCFD1-213ENST00000554776 RAB33BQ9H082 229 aa2.46□□□□□ -2.02
SCFD1-213ENST00000554776 RIBC2Q9H4K1 309 aa2.46□□□□□ -2.02
SCFD1-213ENST00000554776 DHX33Q9H6R0 707 aaKnown RBP2.46□□□□□ -2.02
SCFD1-213ENST00000554776 WDR76Q9H967 626 aa2.46□□□□□ -2.02
SCFD1-213ENST00000554776 ABCC13Q9NSE7 274 aa2.46□□□□□ -2.02
SCFD1-213ENST00000554776 DHRS4-AS1Q9P1J3 65 aa2.46□□□□□ -2.02
SCFD1-213ENST00000554776 PRODH2Q9UF12 536 aa2.46□□□□□ -2.02
SCFD1-213ENST00000554776 MLXQ9UH92 298 aa2.46□□□□□ -2.02
SCFD1-213ENST00000554776 B9D1Q9UPM9 204 aa2.46□□□□□ -2.02
SCFD1-213ENST00000554776 KIF3AQ9Y496 699 aa2.46□□□□□ -2.02
SCFD1-213ENST00000554776 TP53BP1Q12888 1972 aaPredicted RBP2.45□□□□□ -2.02
SCFD1-213ENST00000554776 TRAV9-2A0A087WT02 112 aa2.45□□□□□ -2.02
SCFD1-213ENST00000554776 NPIPA5A0A0B4J1W7 369 aa2.45□□□□□ -2.02
SCFD1-213ENST00000554776 FBLL1A6NHQ2 334 aaKnown RBP2.45□□□□□ -2.02
SCFD1-213ENST00000554776 ACOD1A6NK06 481 aa2.45□□□□□ -2.02
SCFD1-213ENST00000554776 FOXI3A8MTJ6 420 aaPredicted RBP2.45□□□□□ -2.02
SCFD1-213ENST00000554776 SRRM5B3KS81 715 aa2.45□□□□□ -2.02
SCFD1-213ENST00000554776 NPIPA2E9PIF3 369 aa2.45□□□□□ -2.02
SCFD1-213ENST00000554776 NPIPA5E9PKD4 350 aa2.45□□□□□ -2.02
SCFD1-213ENST00000554776 SAP18O00422 153 aaKnown RBP2.45□□□□□ -2.02
SCFD1-213ENST00000554776 MAPK13O15264 365 aa2.45□□□□□ -2.02
SCFD1-213ENST00000554776 PPIHO43447 177 aaKnown RBP2.45□□□□□ -2.02
SCFD1-213ENST00000554776 TYROBPO43914 113 aa2.45□□□□□ -2.02
SCFD1-213ENST00000554776 NEBLO76041 1014 aa2.45□□□□□ -2.02
SCFD1-213ENST00000554776 PRAMEF12O95522 483 aa2.45□□□□□ -2.02
SCFD1-213ENST00000554776 IGHV3-13P01766 116 aa2.45□□□□□ -2.02
SCFD1-213ENST00000554776 IGHV3-9P01782 118 aa2.45□□□□□ -2.02
SCFD1-213ENST00000554776 CSF2P04141 144 aa2.45□□□□□ -2.02
SCFD1-213ENST00000554776 IGFBP1P08833 259 aaPredicted RBP2.45□□□□□ -2.02
SCFD1-213ENST00000554776 ALPIP09923 528 aa2.45□□□□□ -2.02
SCFD1-213ENST00000554776 ANXA3P12429 323 aa2.45□□□□□ -2.02
SCFD1-213ENST00000554776 UQCRBP14927 111 aa2.45□□□□□ -2.02
SCFD1-213ENST00000554776 ACADSP16219 412 aa2.45□□□□□ -2.02
SCFD1-213ENST00000554776 XRCC1P18887 633 aaPredicted RBP2.45□□□□□ -2.02
SCFD1-213ENST00000554776 HNRNPA2B1P22626 353 aaKnown RBP2.45□□□□□ -2.02
SCFD1-213ENST00000554776 PSMA5P28066 241 aa2.45□□□□□ -2.02
SCFD1-213ENST00000554776 NOVA1P51513 510 aaKnown RBP2.45□□□□□ -2.02
SCFD1-213ENST00000554776 ARFIP1P53367 373 aa2.45□□□□□ -2.02
SCFD1-213ENST00000554776 IST1P53990 364 aa2.45□□□□□ -2.02
SCFD1-213ENST00000554776 NAPAP54920 295 aa2.45□□□□□ -2.02
SCFD1-213ENST00000554776 RPS6P62753 249 aaKnown RBP2.45□□□□□ -2.02
SCFD1-213ENST00000554776 SLC10A1Q14973 349 aa2.45□□□□□ -2.02
SCFD1-213ENST00000554776 TAF7Q15545 349 aaPredicted RBP2.45□□□□□ -2.02
SCFD1-213ENST00000554776 ZNF239Q16600 458 aaKnown RBP2.45□□□□□ -2.02
SCFD1-213ENST00000554776 C17orf58Q2M2W7 97 aa2.45□□□□□ -2.02
SCFD1-213ENST00000554776 LINC01620Q4KN68 170 aa2.45□□□□□ -2.02
SCFD1-213ENST00000554776 ZNF311Q5JNZ3 666 aa2.45□□□□□ -2.02
SCFD1-213ENST00000554776 ZNF506Q5JVG8 444 aa2.45□□□□□ -2.02
SCFD1-213ENST00000554776 LINC00242Q5T6M2 205 aa2.45□□□□□ -2.02
SCFD1-213ENST00000554776 LEG1Q6P5S2 330 aa2.45□□□□□ -2.02
SCFD1-213ENST00000554776 LANCL3Q6ZV70 420 aa2.45□□□□□ -2.02
SCFD1-213ENST00000554776 STOX1Q6ZVD7 989 aa2.45□□□□□ -2.02
SCFD1-213ENST00000554776 CENPUQ71F23 418 aa2.45□□□□□ -2.02
SCFD1-213ENST00000554776 PHC2Q8IXK0 858 aa2.45□□□□□ -2.02
SCFD1-213ENST00000554776 M1APQ8TC57 530 aa2.45□□□□□ -2.02
SCFD1-213ENST00000554776 OSTF1Q92882 214 aa2.45□□□□□ -2.02
SCFD1-213ENST00000554776 PINX1Q96BK5 328 aaKnown RBP2.45□□□□□ -2.02
SCFD1-213ENST00000554776 TRIM44Q96DX7 344 aaPredicted RBP2.45□□□□□ -2.02
SCFD1-213ENST00000554776 RBM18Q96H35 190 aaKnown RBP2.45□□□□□ -2.02
SCFD1-213ENST00000554776 TMEM121Q9BTD3 319 aa2.45□□□□□ -2.02
SCFD1-213ENST00000554776 SLC25A51Q9H1U9 297 aa2.45□□□□□ -2.02
SCFD1-213ENST00000554776 MEAF6Q9HAF1 191 aa2.45□□□□□ -2.02
SCFD1-213ENST00000554776 LPAR2Q9HBW0 351 aa2.45□□□□□ -2.02
SCFD1-213ENST00000554776 RPS10P5Q9NQ39 176 aa2.45□□□□□ -2.02
SCFD1-213ENST00000554776 MEPEQ9NQ76 525 aaPredicted RBP2.45□□□□□ -2.02
SCFD1-213ENST00000554776 TBK1Q9UHD2 729 aa2.45□□□□□ -2.02
SCFD1-213ENST00000554776 SNX6Q9UNH7 406 aa2.45□□□□□ -2.02
SCFD1-213ENST00000554776 AP4B1Q9Y6B7 739 aa2.45□□□□□ -2.02
SCFD1-213ENST00000554776 METP08581 1390 aa2.45□□□□□ -2.02
SCFD1-213ENST00000554776 GON4LQ3T8J9 2241 aa2.45□□□□□ -2.02
SCFD1-213ENST00000554776 SF3B1O75533 1304 aaKnown RBP eCLIP2.44□□□□□ -2.024e-8■■■■■ 68.9
SCFD1-213ENST00000554776 BCLAF3A2AJT9 711 aaKnown RBP2.44□□□□□ -2.02
SCFD1-213ENST00000554776 TRIM49BA6NDI0 452 aa2.44□□□□□ -2.02
SCFD1-213ENST00000554776 ZSCAN5BA6NJL1 495 aa2.44□□□□□ -2.02
SCFD1-213ENST00000554776 ZNF487B1APH4 448 aa2.44□□□□□ -2.02
SCFD1-213ENST00000554776 H0YCG3 227 aa2.44□□□□□ -2.02
SCFD1-213ENST00000554776 E2F3O00716 465 aa2.44□□□□□ -2.02
SCFD1-213ENST00000554776 XPO1O14980 1071 aaKnown RBP2.44□□□□□ -2.02
SCFD1-213ENST00000554776 DUX1O43812 170 aa2.44□□□□□ -2.02
SCFD1-213ENST00000554776 EFNA2O43921 213 aa2.44□□□□□ -2.02
SCFD1-213ENST00000554776 JAK2O60674 1132 aa2.44□□□□□ -2.02
SCFD1-213ENST00000554776 ZNF253O75346 499 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms