RNA–Protein interactions for RNA: ENST00000554393.2

PTCD2P1-201, Transcript of pentatricopeptide repeat domain 2 pseudogene 1, humanhuman

BASIC

Gene PTCD2P1, Length 1,136 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2P1-201ENST00000554393 SH2D4BQ5SQS7 431 aa9.48□□□□□ -0.89
PTCD2P1-201ENST00000554393 LRIG3Q6UXM1 1119 aa9.48□□□□□ -0.89
PTCD2P1-201ENST00000554393 MEX3BQ6ZN04 569 aaKnown RBP9.48□□□□□ -0.89
PTCD2P1-201ENST00000554393 R3HCC1LQ7Z5L2 792 aaKnown RBP9.48□□□□□ -0.89
PTCD2P1-201ENST00000554393 PLCZ1Q86YW0 608 aa9.48□□□□□ -0.89
PTCD2P1-201ENST00000554393 SLC44A2Q8IWA5 706 aaPredicted RBP9.48□□□□□ -0.89
PTCD2P1-201ENST00000554393 DDIASQ8IXT1 998 aa9.48□□□□□ -0.89
PTCD2P1-201ENST00000554393 ZNF295-AS1Q8N0V1 137 aa9.48□□□□□ -0.89
PTCD2P1-201ENST00000554393 WDSUB1Q8N9V3 476 aa9.48□□□□□ -0.89
PTCD2P1-201ENST00000554393 FAM83FQ8NEG4 500 aaPredicted RBP9.48□□□□□ -0.89
PTCD2P1-201ENST00000554393 OR10Q1Q8NGQ4 319 aa9.48□□□□□ -0.89
PTCD2P1-201ENST00000554393 HOXB13Q92826 284 aaPredicted RBP9.48□□□□□ -0.89
PTCD2P1-201ENST00000554393 PPCDCQ96CD2 204 aa9.48□□□□□ -0.89
PTCD2P1-201ENST00000554393 ZIM3Q96PE6 472 aa9.48□□□□□ -0.89
PTCD2P1-201ENST00000554393 LMF2Q9BU23 707 aaKnown RBP9.48□□□□□ -0.89
PTCD2P1-201ENST00000554393 UGT2B28Q9BY64 529 aa9.48□□□□□ -0.89
PTCD2P1-201ENST00000554393 PARD6BQ9BYG5 372 aa9.48□□□□□ -0.89
PTCD2P1-201ENST00000554393 C3orf14Q9HBI5 128 aa9.48□□□□□ -0.89
PTCD2P1-201ENST00000554393 Q9N2J8 555 aa9.48□□□□□ -0.89
PTCD2P1-201ENST00000554393 ACSS1Q9NUB1 689 aaPredicted RBP9.48□□□□□ -0.89
PTCD2P1-201ENST00000554393 NTMQ9P121 344 aa9.48□□□□□ -0.89
PTCD2P1-201ENST00000554393 Q9UFV3 132 aa9.48□□□□□ -0.89
PTCD2P1-201ENST00000554393 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.48□□□□□ -0.89
PTCD2P1-201ENST00000554393 MRTO4Q9UKD2 239 aaKnown RBP9.48□□□□□ -0.89
PTCD2P1-201ENST00000554393 MAPRE3Q9UPY8 281 aa9.48□□□□□ -0.89
PTCD2P1-201ENST00000554393 OR10H1Q9Y4A9 318 aa9.48□□□□□ -0.89
PTCD2P1-201ENST00000554393 V9GYY5 206 aaPredicted RBP9.48□□□□□ -0.89
PTCD2P1-201ENST00000554393 CCDC168Q8NDH2 2452 aa9.47□□□□□ -0.89
PTCD2P1-201ENST00000554393 NKX2-6A6NCS4 301 aa9.47□□□□□ -0.89
PTCD2P1-201ENST00000554393 CD8B2A6NJW9 211 aa9.47□□□□□ -0.89
PTCD2P1-201ENST00000554393 TMEM233B4DJY2 109 aa9.47□□□□□ -0.89
PTCD2P1-201ENST00000554393 J3QL48 77 aa9.47□□□□□ -0.89
PTCD2P1-201ENST00000554393 PIP5K1BO14986 540 aa9.47□□□□□ -0.89
PTCD2P1-201ENST00000554393 TM9SF1O15321 606 aa9.47□□□□□ -0.89
PTCD2P1-201ENST00000554393 RGS16O15492 202 aaPredicted RBP9.47□□□□□ -0.89
PTCD2P1-201ENST00000554393 CTIFO43310 598 aaKnown RBP9.47□□□□□ -0.89
PTCD2P1-201ENST00000554393 NME6O75414 186 aaPredicted RBP9.47□□□□□ -0.89
PTCD2P1-201ENST00000554393 SNUPNO95149 360 aaKnown RBP9.47□□□□□ -0.89
PTCD2P1-201ENST00000554393 SNRPB2P08579 225 aaKnown RBP9.47□□□□□ -0.89
PTCD2P1-201ENST00000554393 BCKDHAP12694 445 aa9.47□□□□□ -0.89
PTCD2P1-201ENST00000554393 CPN1P15169 458 aa9.47□□□□□ -0.89
PTCD2P1-201ENST00000554393 BMP7P18075 431 aa9.47□□□□□ -0.89
PTCD2P1-201ENST00000554393 GRK2P25098 689 aa9.47□□□□□ -0.89
PTCD2P1-201ENST00000554393 SRD5A2P31213 254 aa9.47□□□□□ -0.89
PTCD2P1-201ENST00000554393 CEACAM8P31997 349 aaPredicted RBP9.47□□□□□ -0.89
PTCD2P1-201ENST00000554393 ARRB2P32121 409 aa9.47□□□□□ -0.89
PTCD2P1-201ENST00000554393 EVI2BP34910 448 aa9.47□□□□□ -0.89
PTCD2P1-201ENST00000554393 HPCAL1P37235 193 aa9.47□□□□□ -0.89
PTCD2P1-201ENST00000554393 ADH7P40394 386 aa9.47□□□□□ -0.89
PTCD2P1-201ENST00000554393 MAP3K8P41279 467 aa9.47□□□□□ -0.89
PTCD2P1-201ENST00000554393 GAS1P54826 345 aa9.47□□□□□ -0.89
PTCD2P1-201ENST00000554393 HSPB3Q12988 150 aa9.47□□□□□ -0.89
PTCD2P1-201ENST00000554393 MLC1Q15049 377 aa9.47□□□□□ -0.89
PTCD2P1-201ENST00000554393 TOMM20Q15388 145 aa9.47□□□□□ -0.89
PTCD2P1-201ENST00000554393 DECR1Q16698 335 aa9.47□□□□□ -0.89
PTCD2P1-201ENST00000554393 KRT71Q3SY84 523 aa9.47□□□□□ -0.89
PTCD2P1-201ENST00000554393 GALNTL6Q49A17 601 aa9.47□□□□□ -0.89
PTCD2P1-201ENST00000554393 VPS26BQ4G0F5 336 aa9.47□□□□□ -0.89
PTCD2P1-201ENST00000554393 ATP6AP1LQ52LC2 224 aa9.47□□□□□ -0.89
PTCD2P1-201ENST00000554393 WIPI1Q5MNZ9 446 aaPredicted RBP9.47□□□□□ -0.89
PTCD2P1-201ENST00000554393 NSUN5P2Q63ZY6 315 aa9.47□□□□□ -0.89
PTCD2P1-201ENST00000554393 ZCCHC23Q6ZST2 131 aa9.47□□□□□ -0.89
PTCD2P1-201ENST00000554393 SEM1Q6ZVN7 128 aa9.47□□□□□ -0.89
PTCD2P1-201ENST00000554393 VASH1Q7L8A9 365 aaPredicted RBP9.47□□□□□ -0.89
PTCD2P1-201ENST00000554393 CROCCP2Q86T23 111 aa9.47□□□□□ -0.89
PTCD2P1-201ENST00000554393 CEP70Q8NHQ1 597 aa9.47□□□□□ -0.89
PTCD2P1-201ENST00000554393 ABTB1Q969K4 478 aaPredicted RBP9.47□□□□□ -0.89
PTCD2P1-201ENST00000554393 EFHD2Q96C19 240 aaPredicted RBP9.47□□□□□ -0.89
PTCD2P1-201ENST00000554393 WDYHV1Q96HA8 205 aa9.47□□□□□ -0.89
PTCD2P1-201ENST00000554393 TSSK3Q96PN8 268 aa9.47□□□□□ -0.89
PTCD2P1-201ENST00000554393 UCK2Q9BZX2 261 aa9.47□□□□□ -0.89
PTCD2P1-201ENST00000554393 SERHLQ9NQF3 203 aa9.47□□□□□ -0.89
PTCD2P1-201ENST00000554393 SDHAF3Q9NRP4 125 aa9.47□□□□□ -0.89
PTCD2P1-201ENST00000554393 FAM120CQ9NX05 1096 aaKnown RBP9.47□□□□□ -0.89
PTCD2P1-201ENST00000554393 ALKBH4Q9NXW9 302 aa9.47□□□□□ -0.89
PTCD2P1-201ENST00000554393 CBLCQ9ULV8 474 aa9.47□□□□□ -0.89
PTCD2P1-201ENST00000554393 AKAP9Q99996 3911 aa9.47□□□□□ -0.89
PTCD2P1-201ENST00000554393 NUP214P35658 2090 aaPredicted RBP9.47□□□□□ -0.89
PTCD2P1-201ENST00000554393 MED12LQ86YW9 2145 aa9.47□□□□□ -0.89
PTCD2P1-201ENST00000554393 KIAA1549Q9HCM3 1950 aa9.46□□□□□ -0.89
PTCD2P1-201ENST00000554393 PCNX3Q9H6A9 2034 aa9.46□□□□□ -0.89
PTCD2P1-201ENST00000554393 CSMD2Q7Z408 3487 aa9.46□□□□□ -0.89
PTCD2P1-201ENST00000554393 MBD3L4A6NDZ8 208 aaPredicted RBP9.46□□□□□ -0.9
PTCD2P1-201ENST00000554393 MBD3L3A6NE82 208 aaPredicted RBP9.46□□□□□ -0.9
PTCD2P1-201ENST00000554393 MBD3L5A6NJ08 208 aaPredicted RBP9.46□□□□□ -0.9
PTCD2P1-201ENST00000554393 ESPNB1AK53 854 aa9.46□□□□□ -0.9
PTCD2P1-201ENST00000554393 BIRC5O15392 142 aa9.46□□□□□ -0.9
PTCD2P1-201ENST00000554393 LYPLA1O75608 230 aaPredicted RBP9.46□□□□□ -0.9
PTCD2P1-201ENST00000554393 IL33O95760 270 aa9.46□□□□□ -0.9
PTCD2P1-201ENST00000554393 PRPS2P11908 318 aa9.46□□□□□ -0.9
PTCD2P1-201ENST00000554393 CYP4B1P13584 511 aa9.46□□□□□ -0.9
PTCD2P1-201ENST00000554393 CREB1P16220 341 aa9.46□□□□□ -0.9
PTCD2P1-201ENST00000554393 GPC1P35052 558 aa9.46□□□□□ -0.9
PTCD2P1-201ENST00000554393 PEX19P40855 299 aa9.46□□□□□ -0.9
PTCD2P1-201ENST00000554393 SERPINB4P48594 390 aa9.46□□□□□ -0.9
PTCD2P1-201ENST00000554393 MANFP55145 182 aaKnown RBP9.46□□□□□ -0.9
PTCD2P1-201ENST00000554393 GFRA1P56159 465 aa9.46□□□□□ -0.9
PTCD2P1-201ENST00000554393 RCAN2Q14206 197 aa9.46□□□□□ -0.9
PTCD2P1-201ENST00000554393 GANABQ14697 944 aaKnown RBP9.46□□□□□ -0.9
PTCD2P1-201ENST00000554393 ZNF385BQ569K4 471 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms