RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 SLC22A7Q9Y694 548 aa2.86□□□□□ -1.95
SLIRP-202ENST00000553981 EXPH5Q8NEV8 1989 aa2.86□□□□□ -1.95
SLIRP-202ENST00000553981 NF1P21359 2839 aa2.86□□□□□ -1.95
SLIRP-202ENST00000553981 MTORP42345 2549 aa2.85□□□□□ -1.95
SLIRP-202ENST00000553981 SETD2Q9BYW2 2564 aaPredicted RBP2.85□□□□□ -1.95
SLIRP-202ENST00000553981 ITPR3Q14573 2671 aa2.85□□□□□ -1.95
SLIRP-202ENST00000553981 A0A087WWL8 130 aa2.85□□□□□ -1.95
SLIRP-202ENST00000553981 CLCA1A8K7I4 914 aa2.85□□□□□ -1.95
SLIRP-202ENST00000553981 FOXO6A8MYZ6 492 aa2.85□□□□□ -1.95
SLIRP-202ENST00000553981 H3BMM5 538 aa2.85□□□□□ -1.95
SLIRP-202ENST00000553981 PSMD9O00233 223 aa2.85□□□□□ -1.95
SLIRP-202ENST00000553981 RTCAO00442 366 aaKnown RBP2.85□□□□□ -1.95
SLIRP-202ENST00000553981 TAPBPO15533 448 aa2.85□□□□□ -1.95
SLIRP-202ENST00000553981 NDUFS4O43181 175 aa2.85□□□□□ -1.95
SLIRP-202ENST00000553981 OR1F1O43749 312 aa2.85□□□□□ -1.95
SLIRP-202ENST00000553981 KIF5CO60282 957 aa2.85□□□□□ -1.95
SLIRP-202ENST00000553981 CEP104O60308 925 aa2.85□□□□□ -1.95
SLIRP-202ENST00000553981 LDB3O75112 727 aa2.85□□□□□ -1.95
SLIRP-202ENST00000553981 NME6O75414 186 aaPredicted RBP2.85□□□□□ -1.95
SLIRP-202ENST00000553981 VPS26AO75436 327 aa2.85□□□□□ -1.95
SLIRP-202ENST00000553981 NDUFS3O75489 264 aa2.85□□□□□ -1.95
SLIRP-202ENST00000553981 WISP3O95389 354 aaPredicted RBP2.85□□□□□ -1.95
SLIRP-202ENST00000553981 ACSL3O95573 720 aa2.85□□□□□ -1.95
SLIRP-202ENST00000553981 EPPINO95925 133 aa2.85□□□□□ -1.95
SLIRP-202ENST00000553981 IFNB1P01574 187 aa2.85□□□□□ -1.95
SLIRP-202ENST00000553981 IGKV3-11P04433 115 aa2.85□□□□□ -1.95
SLIRP-202ENST00000553981 UQCRHP07919 91 aa2.85□□□□□ -1.95
SLIRP-202ENST00000553981 CT62P0C5K7 136 aa2.85□□□□□ -1.95
SLIRP-202ENST00000553981 CNR1P21554 472 aa2.85□□□□□ -1.95
SLIRP-202ENST00000553981 ATP5DP30049 168 aa2.85□□□□□ -1.95
SLIRP-202ENST00000553981 UQCRC1P31930 480 aa2.85□□□□□ -1.95
SLIRP-202ENST00000553981 OPRM1P35372 400 aa2.85□□□□□ -1.95
SLIRP-202ENST00000553981 SLC1A2P43004 574 aa2.85□□□□□ -1.95
SLIRP-202ENST00000553981 MAGEA3P43357 314 aa2.85□□□□□ -1.95
SLIRP-202ENST00000553981 RPL21P46778 160 aaKnown RBP2.85□□□□□ -1.95
SLIRP-202ENST00000553981 DIO1P49895 249 aa2.85□□□□□ -1.95
SLIRP-202ENST00000553981 DGKQP52824 942 aa2.85□□□□□ -1.95
SLIRP-202ENST00000553981 PRKAG1P54619 331 aa2.85□□□□□ -1.95
SLIRP-202ENST00000553981 ADARP55265 1226 aaKnown RBP2.85□□□□□ -1.95
SLIRP-202ENST00000553981 LIM2P55344 173 aa2.85□□□□□ -1.95
SLIRP-202ENST00000553981 CLDN15P56746 228 aa2.85□□□□□ -1.95
SLIRP-202ENST00000553981 RWDD2BP57060 319 aa2.85□□□□□ -1.95
SLIRP-202ENST00000553981 RPS15AP62244 130 aaKnown RBP2.85□□□□□ -1.95
SLIRP-202ENST00000553981 PRAMEP78395 509 aa2.85□□□□□ -1.95
SLIRP-202ENST00000553981 ABATP80404 500 aa2.85□□□□□ -1.95
SLIRP-202ENST00000553981 REEP5Q00765 189 aa2.85□□□□□ -1.95
SLIRP-202ENST00000553981 FAM27E3Q08E93 113 aa2.85□□□□□ -1.95
SLIRP-202ENST00000553981 ASPHQ12797 758 aa2.85□□□□□ -1.95
SLIRP-202ENST00000553981 SLC10A1Q14973 349 aa2.85□□□□□ -1.95
SLIRP-202ENST00000553981 NDUFA9Q16795 377 aa2.85□□□□□ -1.95
SLIRP-202ENST00000553981 ACSF3Q4G176 576 aaPredicted RBP2.85□□□□□ -1.95
SLIRP-202ENST00000553981 EIPR1Q53HC9 387 aa2.85□□□□□ -1.95
SLIRP-202ENST00000553981 Q5PR19 223 aa2.85□□□□□ -1.95
SLIRP-202ENST00000553981 RIPPLY2Q5TAB7 128 aa2.85□□□□□ -1.95
SLIRP-202ENST00000553981 KIAA0930Q6ICG6 404 aaPredicted RBP2.85□□□□□ -1.95
SLIRP-202ENST00000553981 NEPROQ6NW34 567 aa2.85□□□□□ -1.95
SLIRP-202ENST00000553981 ARHGAP11AQ6P4F7 1023 aa2.85□□□□□ -1.95
SLIRP-202ENST00000553981 ZNF449Q6P9G9 518 aa2.85□□□□□ -1.95
SLIRP-202ENST00000553981 LCTLQ6UWM7 567 aa2.85□□□□□ -1.95
SLIRP-202ENST00000553981 SBSNQ6UWP8 590 aa2.85□□□□□ -1.95
SLIRP-202ENST00000553981 PPP1R21Q6ZMI0 780 aa2.85□□□□□ -1.95
SLIRP-202ENST00000553981 COLCA1Q6ZS62 124 aa2.85□□□□□ -1.95
SLIRP-202ENST00000553981 SLC13A5Q86YT5 568 aaPredicted RBP2.85□□□□□ -1.95
SLIRP-202ENST00000553981 OR4N5Q8IXE1 308 aa2.85□□□□□ -1.95
SLIRP-202ENST00000553981 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP2.85□□□□□ -1.95
SLIRP-202ENST00000553981 SLC5A8Q8N695 610 aa2.85□□□□□ -1.95
SLIRP-202ENST00000553981 SLC15A4Q8N697 577 aa2.85□□□□□ -1.95
SLIRP-202ENST00000553981 FAM47BQ8NA70 645 aa2.85□□□□□ -1.95
SLIRP-202ENST00000553981 POGLUT1Q8NBL1 392 aa2.85□□□□□ -1.95
SLIRP-202ENST00000553981 CHDHQ8NE62 594 aaPredicted RBP2.85□□□□□ -1.95
SLIRP-202ENST00000553981 OR10G3Q8NGC4 313 aa2.85□□□□□ -1.95
SLIRP-202ENST00000553981 LILRB1Q8NHL6 650 aaPredicted RBP2.85□□□□□ -1.95
SLIRP-202ENST00000553981 NEIL3Q8TAT5 605 aa2.85□□□□□ -1.95
SLIRP-202ENST00000553981 ANKRD49Q8WVL7 239 aa2.85□□□□□ -1.95
SLIRP-202ENST00000553981 RNASE6Q93091 150 aaKnown RBP2.85□□□□□ -1.95
SLIRP-202ENST00000553981 RERGQ96A58 199 aaPredicted RBP2.85□□□□□ -1.95
SLIRP-202ENST00000553981 ESAMQ96AP7 390 aa2.85□□□□□ -1.95
SLIRP-202ENST00000553981 PPWD1Q96BP3 646 aaKnown RBP2.85□□□□□ -1.95
SLIRP-202ENST00000553981 CTHRC1Q96CG8 243 aa2.85□□□□□ -1.95
SLIRP-202ENST00000553981 MS4A6EQ96DS6 147 aa2.85□□□□□ -1.95
SLIRP-202ENST00000553981 RMND5BQ96G75 393 aaPredicted RBP2.85□□□□□ -1.95
SLIRP-202ENST00000553981 SNF8Q96H20 258 aa2.85□□□□□ -1.95
SLIRP-202ENST00000553981 WDYHV1Q96HA8 205 aa2.85□□□□□ -1.95
SLIRP-202ENST00000553981 TSNARE1Q96NA8 513 aa2.85□□□□□ -1.95
SLIRP-202ENST00000553981 WFIKKN1Q96NZ8 548 aa2.85□□□□□ -1.95
SLIRP-202ENST00000553981 PANX3Q96QZ0 392 aa2.85□□□□□ -1.95
SLIRP-202ENST00000553981 OR1F2PQ96R84 312 aa2.85□□□□□ -1.95
SLIRP-202ENST00000553981 DESI2Q9BSY9 194 aa2.85□□□□□ -1.95
SLIRP-202ENST00000553981 TRMOQ9BU70 441 aa2.85□□□□□ -1.95
SLIRP-202ENST00000553981 SORBS1Q9BX66 1292 aaKnown RBP2.85□□□□□ -1.95
SLIRP-202ENST00000553981 DEFB126Q9BYW3 111 aa2.85□□□□□ -1.95
SLIRP-202ENST00000553981 UBQLN3Q9H347 655 aa2.85□□□□□ -1.95
SLIRP-202ENST00000553981 IL1RL2Q9HB29 575 aa2.85□□□□□ -1.95
SLIRP-202ENST00000553981 ANKHQ9HCJ1 492 aa2.85□□□□□ -1.95
SLIRP-202ENST00000553981 ALKBH4Q9NXW9 302 aa2.85□□□□□ -1.95
SLIRP-202ENST00000553981 C19orf25Q9UFG5 118 aaPredicted RBP2.85□□□□□ -1.95
SLIRP-202ENST00000553981 FBXW2Q9UKT8 454 aa2.85□□□□□ -1.95
SLIRP-202ENST00000553981 ZNF490Q9ULM2 529 aaPredicted RBP2.85□□□□□ -1.95
SLIRP-202ENST00000553981 KLF13Q9Y2Y9 288 aaPredicted RBP2.85□□□□□ -1.95
SLIRP-202ENST00000553981 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP2.85□□□□□ -1.956e-18■□□□□ 8
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms