RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 GLCEO94923 617 aa2.7□□□□□ -1.98
SCFD1-210ENST00000553693 CALCAP01258 141 aa2.7□□□□□ -1.98
SCFD1-210ENST00000553693 CCDC159P0C7I6 412 aa2.7□□□□□ -1.98
SCFD1-210ENST00000553693 CALML3P27482 149 aa2.7□□□□□ -1.98
SCFD1-210ENST00000553693 MARCKSP29966 332 aaPredicted RBP2.7□□□□□ -1.98
SCFD1-210ENST00000553693 HMGCLP35914 325 aa2.7□□□□□ -1.98
SCFD1-210ENST00000553693 EPS15P42566 896 aa2.7□□□□□ -1.98
SCFD1-210ENST00000553693 SERPINH1P50454 418 aaKnown RBP2.7□□□□□ -1.98
SCFD1-210ENST00000553693 RIPK4P57078 832 aa2.7□□□□□ -1.98
SCFD1-210ENST00000553693 POLR2FP61218 127 aaKnown RBP2.7□□□□□ -1.98
SCFD1-210ENST00000553693 FKBP1BP68106 108 aa2.7□□□□□ -1.98
SCFD1-210ENST00000553693 CXCL6P80162 114 aa2.7□□□□□ -1.98
SCFD1-210ENST00000553693 IL1RL1Q01638 556 aa2.7□□□□□ -1.98
SCFD1-210ENST00000553693 SLC34A1Q06495 639 aa2.7□□□□□ -1.98
SCFD1-210ENST00000553693 C17orf67Q0P5P2 114 aa2.7□□□□□ -1.98
SCFD1-210ENST00000553693 ISXQ2M1V0 245 aa2.7□□□□□ -1.98
SCFD1-210ENST00000553693 ANKRD55Q3KP44 614 aa2.7□□□□□ -1.98
SCFD1-210ENST00000553693 AARDQ4LEZ3 155 aa2.7□□□□□ -1.98
SCFD1-210ENST00000553693 PRR5LQ6MZQ0 368 aa2.7□□□□□ -1.98
SCFD1-210ENST00000553693 C2orf66Q6UXQ4 117 aa2.7□□□□□ -1.98
SCFD1-210ENST00000553693 FAM43BQ6ZT52 329 aaPredicted RBP2.7□□□□□ -1.98
SCFD1-210ENST00000553693 ADGRD2Q7Z7M1 963 aa2.7□□□□□ -1.98
SCFD1-210ENST00000553693 TEX9Q8N6V9 391 aa2.7□□□□□ -1.98
SCFD1-210ENST00000553693 FAF2Q96CS3 445 aa2.7□□□□□ -1.98
SCFD1-210ENST00000553693 SGF29Q96ES7 293 aa2.7□□□□□ -1.98
SCFD1-210ENST00000553693 ERGIC2Q96RQ1 377 aa2.7□□□□□ -1.98
SCFD1-210ENST00000553693 OSBPL8Q9BZF1 889 aa2.7□□□□□ -1.98
SCFD1-210ENST00000553693 EPS15L1Q9UBC2 864 aa2.7□□□□□ -1.98
SCFD1-210ENST00000553693 APPL1Q9UKG1 709 aa2.7□□□□□ -1.98
SCFD1-210ENST00000553693 CCPG1Q9ULG6 757 aa2.7□□□□□ -1.98
SCFD1-210ENST00000553693 KIF3AQ9Y496 699 aa2.7□□□□□ -1.98
SCFD1-210ENST00000553693 AP1M2Q9Y6Q5 423 aa2.7□□□□□ -1.98
SCFD1-210ENST00000553693 FER1L6Q2WGJ9 1857 aa2.7□□□□□ -1.98
SCFD1-210ENST00000553693 FLT4P35916 1363 aa2.7□□□□□ -1.98
SCFD1-210ENST00000553693 PDE4DIPQ5VU43 2346 aa2.7□□□□□ -1.98
SCFD1-210ENST00000553693 SCN4AP35499 1836 aa2.7□□□□□ -1.98
SCFD1-210ENST00000553693 DICER1Q9UPY3 1922 aaKnown RBP2.7□□□□□ -1.98
SCFD1-210ENST00000553693 TJP1Q07157 1748 aa2.69□□□□□ -1.98
SCFD1-210ENST00000553693 TRBV2A0A0J9YWF9 115 aa2.69□□□□□ -1.98
SCFD1-210ENST00000553693 CCT8L1PA6NM43 557 aa2.69□□□□□ -1.98
SCFD1-210ENST00000553693 MPHOSPH10O00566 681 aaKnown RBP2.69□□□□□ -1.98
SCFD1-210ENST00000553693 NDC80O14777 642 aa2.69□□□□□ -1.98
SCFD1-210ENST00000553693 RASGRF2O14827 1237 aa2.69□□□□□ -1.98
SCFD1-210ENST00000553693 AKAP3O75969 853 aa2.69□□□□□ -1.98
SCFD1-210ENST00000553693 MT-ATP6P00846 226 aa2.69□□□□□ -1.98
SCFD1-210ENST00000553693 GSTA2P09210 222 aa2.69□□□□□ -1.98
SCFD1-210ENST00000553693 GHRP10912 638 aa2.69□□□□□ -1.98
SCFD1-210ENST00000553693 VCLP18206 1134 aa2.69□□□□□ -1.98
SCFD1-210ENST00000553693 CCR4P51679 360 aa2.69□□□□□ -1.98
SCFD1-210ENST00000553693 SLC12A3P55017 1021 aa2.69□□□□□ -1.98
SCFD1-210ENST00000553693 KCNK10P57789 538 aa2.69□□□□□ -1.98
SCFD1-210ENST00000553693 ARHGAP1Q07960 439 aa2.69□□□□□ -1.98
SCFD1-210ENST00000553693 OVGP1Q12889 678 aa2.69□□□□□ -1.98
SCFD1-210ENST00000553693 SLC39A6Q13433 755 aa2.69□□□□□ -1.98
SCFD1-210ENST00000553693 TSTA3Q13630 321 aaPredicted RBP2.69□□□□□ -1.98
SCFD1-210ENST00000553693 EMC2Q15006 297 aa2.69□□□□□ -1.98
SCFD1-210ENST00000553693 INAQ16352 499 aa2.69□□□□□ -1.98
SCFD1-210ENST00000553693 PKN2Q16513 984 aaKnown RBP2.69□□□□□ -1.98
SCFD1-210ENST00000553693 CARTPTQ16568 116 aa2.69□□□□□ -1.98
SCFD1-210ENST00000553693 DNAJC21Q5F1R6 531 aaKnown RBP2.69□□□□□ -1.98
SCFD1-210ENST00000553693 C9orf129Q5T035 196 aaKnown RBP2.69□□□□□ -1.98
SCFD1-210ENST00000553693 C1orf189Q5VU69 101 aa2.69□□□□□ -1.98
SCFD1-210ENST00000553693 ZNF530Q6P9A1 599 aaPredicted RBP2.69□□□□□ -1.98
SCFD1-210ENST00000553693 IGFL3Q6UXB1 125 aa2.69□□□□□ -1.98
SCFD1-210ENST00000553693 LCA5Q86VQ0 697 aa2.69□□□□□ -1.98
SCFD1-210ENST00000553693 TMEM126BQ8IUX1 230 aa2.69□□□□□ -1.98
SCFD1-210ENST00000553693 AQP12AQ8IXF9 295 aa2.69□□□□□ -1.98
SCFD1-210ENST00000553693 KLHDC8AQ8IYD2 350 aa2.69□□□□□ -1.98
SCFD1-210ENST00000553693 THEM5Q8N1Q8 247 aa2.69□□□□□ -1.98
SCFD1-210ENST00000553693 ARL6IP6Q8N6S5 226 aa2.69□□□□□ -1.98
SCFD1-210ENST00000553693 OR2L5Q8NG80 312 aa2.69□□□□□ -1.98
SCFD1-210ENST00000553693 SLC13A3Q8WWT9 602 aa2.69□□□□□ -1.98
SCFD1-210ENST00000553693 ULK4Q96C45 1275 aa2.69□□□□□ -1.98
SCFD1-210ENST00000553693 ZNF799Q96GE5 643 aa2.69□□□□□ -1.98
SCFD1-210ENST00000553693 C16orf58Q96GQ5 468 aa2.69□□□□□ -1.98
SCFD1-210ENST00000553693 NSMCE2Q96MF7 247 aa2.69□□□□□ -1.98
SCFD1-210ENST00000553693 ZNF560Q96MR9 790 aa2.69□□□□□ -1.98
SCFD1-210ENST00000553693 FAM111AQ96PZ2 611 aa2.69□□□□□ -1.98
SCFD1-210ENST00000553693 PANX3Q96QZ0 392 aa2.69□□□□□ -1.98
SCFD1-210ENST00000553693 RAB40CQ96S21 281 aa2.69□□□□□ -1.98
SCFD1-210ENST00000553693 TESK2Q96S53 571 aa2.69□□□□□ -1.98
SCFD1-210ENST00000553693 CCT8L2Q96SF2 557 aa2.69□□□□□ -1.98
SCFD1-210ENST00000553693 LRRC2Q9BYS8 371 aa2.69□□□□□ -1.98
SCFD1-210ENST00000553693 DPH5Q9H2P9 285 aa2.69□□□□□ -1.98
SCFD1-210ENST00000553693 ZCCHC3Q9NUD5 404 aaKnown RBP2.69□□□□□ -1.98
SCFD1-210ENST00000553693 IMPAD1Q9NX62 359 aa2.69□□□□□ -1.98
SCFD1-210ENST00000553693 EIF3KQ9UBQ5 218 aaKnown RBP2.69□□□□□ -1.98
SCFD1-210ENST00000553693 FETUBQ9UGM5 382 aa2.69□□□□□ -1.98
SCFD1-210ENST00000553693 TMCC3Q9ULS5 477 aa2.69□□□□□ -1.98
SCFD1-210ENST00000553693 GPR132Q9UNW8 380 aa2.69□□□□□ -1.98
SCFD1-210ENST00000553693 MOKQ9UQ07 419 aa2.69□□□□□ -1.98
SCFD1-210ENST00000553693 AURKCQ9UQB9 309 aa2.69□□□□□ -1.98
SCFD1-210ENST00000553693 SLX4Q8IY92 1834 aa2.69□□□□□ -1.98
SCFD1-210ENST00000553693 KIF24Q5T7B8 1368 aa2.69□□□□□ -1.98
SCFD1-210ENST00000553693 ANKRD31Q8N7Z5 1873 aa2.69□□□□□ -1.98
SCFD1-210ENST00000553693 TMEM129A0AVI4 362 aa2.68□□□□□ -1.98
SCFD1-210ENST00000553693 EPOPA6NHQ4 379 aa2.68□□□□□ -1.98
SCFD1-210ENST00000553693 SLC9B1P1A6NJY1 282 aa2.68□□□□□ -1.98
SCFD1-210ENST00000553693 SAP18O00422 153 aaKnown RBP2.68□□□□□ -1.98
SCFD1-210ENST00000553693 GPAA1O43292 621 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms