RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 MAT2BQ9NZL9 334 aa12.27□□□□□ -0.45
PRPF39-204ENST00000553605 CD274Q9NZQ7 290 aa12.27□□□□□ -0.45
PRPF39-204ENST00000553605 MCTS1Q9ULC4 181 aaKnown RBP12.27□□□□□ -0.45
PRPF39-204ENST00000553605 FAM95CA0A1B0GW59 222 aa12.26□□□□□ -0.45
PRPF39-204ENST00000553605 VWC2LB2RUY7 222 aa12.26□□□□□ -0.45
PRPF39-204ENST00000553605 H7C417 338 aa12.26□□□□□ -0.45
PRPF39-204ENST00000553605 ABCD4O14678 606 aa12.26□□□□□ -0.45
PRPF39-204ENST00000553605 SCO2O43819 266 aa12.26□□□□□ -0.45
PRPF39-204ENST00000553605 BANF1O75531 89 aa12.26□□□□□ -0.45
PRPF39-204ENST00000553605 VENTXO95231 258 aa12.26□□□□□ -0.45
PRPF39-204ENST00000553605 CBX7O95931 251 aa12.26□□□□□ -0.45
PRPF39-204ENST00000553605 TUBBP07437 444 aa12.26□□□□□ -0.45
PRPF39-204ENST00000553605 IL12BP29460 328 aa12.26□□□□□ -0.45
PRPF39-204ENST00000553605 AGTR1P30556 359 aa12.26□□□□□ -0.45
PRPF39-204ENST00000553605 EMDP50402 254 aa12.26□□□□□ -0.45
PRPF39-204ENST00000553605 EFNA4P52798 201 aa12.26□□□□□ -0.45
PRPF39-204ENST00000553605 PNLIPRP2P54317 469 aa12.26□□□□□ -0.45
PRPF39-204ENST00000553605 ACTG1P63261 375 aa12.26□□□□□ -0.45
PRPF39-204ENST00000553605 P2RY6Q15077 328 aa12.26□□□□□ -0.45
PRPF39-204ENST00000553605 GLYR1Q49A26 553 aaPredicted RBP12.26□□□□□ -0.45
PRPF39-204ENST00000553605 TRMT12Q53H54 448 aaKnown RBP12.26□□□□□ -0.45
PRPF39-204ENST00000553605 GRHL2Q6ISB3 625 aa12.26□□□□□ -0.45
PRPF39-204ENST00000553605 LARP4Q71RC2 724 aaKnown RBP eCLIP12.26□□□□□ -0.45
PRPF39-204ENST00000553605 LRRC70Q7Z2Q7 622 aa12.26□□□□□ -0.45
PRPF39-204ENST00000553605 NUDT13Q86X67 352 aa12.26□□□□□ -0.45
PRPF39-204ENST00000553605 PDPRQ8NCN5 879 aa12.26□□□□□ -0.45
PRPF39-204ENST00000553605 GCDHQ92947 438 aaPredicted RBP12.26□□□□□ -0.45
PRPF39-204ENST00000553605 KISS1RQ969F8 398 aaPredicted RBP12.26□□□□□ -0.45
PRPF39-204ENST00000553605 C3orf49Q96BT1 292 aa12.26□□□□□ -0.45
PRPF39-204ENST00000553605 NAT9Q9BTE0 207 aa12.26□□□□□ -0.45
PRPF39-204ENST00000553605 POTEKPQ9BYX7 375 aa12.26□□□□□ -0.45
PRPF39-204ENST00000553605 ZBTB26Q9HCK0 441 aa12.26□□□□□ -0.45
PRPF39-204ENST00000553605 PAQR5Q9NXK6 330 aaPredicted RBP12.26□□□□□ -0.45
PRPF39-204ENST00000553605 STOML1Q9UBI4 398 aa12.26□□□□□ -0.45
PRPF39-204ENST00000553605 A0A0A6YYJ9 748 aa12.25□□□□□ -0.45
PRPF39-204ENST00000553605 E7EQL1 145 aa12.25□□□□□ -0.45
PRPF39-204ENST00000553605 SLCO1B7G3V0H7 640 aa12.25□□□□□ -0.45
PRPF39-204ENST00000553605 SYNGR4O95473 234 aa12.25□□□□□ -0.45
PRPF39-204ENST00000553605 NTN1O95631 604 aa12.25□□□□□ -0.45
PRPF39-204ENST00000553605 ADAP00813 363 aa12.25□□□□□ -0.45
PRPF39-204ENST00000553605 ATP1B1P05026 303 aa12.25□□□□□ -0.45
PRPF39-204ENST00000553605 CCDC166P0CW27 439 aa12.25□□□□□ -0.45
PRPF39-204ENST00000553605 CREB1P16220 341 aa12.25□□□□□ -0.45
PRPF39-204ENST00000553605 NR4A2P43354 598 aa12.25□□□□□ -0.45
PRPF39-204ENST00000553605 CUL3Q13618 768 aa12.25□□□□□ -0.45
PRPF39-204ENST00000553605 PRR31Q5SQ13 230 aa12.25□□□□□ -0.45
PRPF39-204ENST00000553605 GTF2IRD2BQ6EKJ0 949 aa12.25□□□□□ -0.45
PRPF39-204ENST00000553605 TTC27Q6P3X3 843 aa12.25□□□□□ -0.45
PRPF39-204ENST00000553605 TRMT10BQ6PF06 316 aaKnown RBP12.25□□□□□ -0.45
PRPF39-204ENST00000553605 GTF2IRD2Q86UP8 949 aa12.25□□□□□ -0.45
PRPF39-204ENST00000553605 ZC3HC1Q86WB0 502 aaKnown RBP12.25□□□□□ -0.45
PRPF39-204ENST00000553605 IGDCC3Q8IVU1 814 aa12.25□□□□□ -0.45
PRPF39-204ENST00000553605 FBXL14Q8N1E6 418 aa12.25□□□□□ -0.45
PRPF39-204ENST00000553605 MUC15Q8N387 334 aa12.25□□□□□ -0.45
PRPF39-204ENST00000553605 OR10D3Q8NH80 312 aa12.25□□□□□ -0.45
PRPF39-204ENST00000553605 KAT2AQ92830 837 aa12.25□□□□□ -0.45
PRPF39-204ENST00000553605 C1GALT1C1Q96EU7 318 aa12.25□□□□□ -0.45
PRPF39-204ENST00000553605 RADILQ96JH8 1075 aa12.25□□□□□ -0.45
PRPF39-204ENST00000553605 DHRS9Q9BPW9 319 aa12.25□□□□□ -0.45
PRPF39-204ENST00000553605 DESI2Q9BSY9 194 aa12.25□□□□□ -0.45
PRPF39-204ENST00000553605 OCEL1Q9H607 264 aa12.25□□□□□ -0.45
PRPF39-204ENST00000553605 PLAC1Q9HBJ0 212 aa12.25□□□□□ -0.45
PRPF39-204ENST00000553605 SDHAF3Q9NRP4 125 aa12.25□□□□□ -0.45
PRPF39-204ENST00000553605 TSC22D4Q9Y3Q8 395 aa12.25□□□□□ -0.45
PRPF39-204ENST00000553605 TMEM89A2RUT3 159 aa12.24□□□□□ -0.45
PRPF39-204ENST00000553605 GOLGA6L10A6NI86 522 aa12.24□□□□□ -0.45
PRPF39-204ENST00000553605 LY6HO94772 140 aa12.24□□□□□ -0.45
PRPF39-204ENST00000553605 S100BP04271 92 aaPredicted RBP12.24□□□□□ -0.45
PRPF39-204ENST00000553605 CT45A8P0DMV1 189 aa12.24□□□□□ -0.45
PRPF39-204ENST00000553605 CT45A9P0DMV2 189 aa12.24□□□□□ -0.45
PRPF39-204ENST00000553605 EVI2BP34910 448 aa12.24□□□□□ -0.45
PRPF39-204ENST00000553605 FEN1P39748 380 aaKnown RBP12.24□□□□□ -0.45
PRPF39-204ENST00000553605 PHEXP78562 749 aa12.24□□□□□ -0.45
PRPF39-204ENST00000553605 ITGADQ13349 1161 aa12.24□□□□□ -0.45
PRPF39-204ENST00000553605 OR4D1Q15615 310 aa12.24□□□□□ -0.45
PRPF39-204ENST00000553605 MSS51Q4VC12 460 aa12.24□□□□□ -0.45
PRPF39-204ENST00000553605 CT45A2Q5DJT8 189 aa12.24□□□□□ -0.45
PRPF39-204ENST00000553605 TFAP2EQ6VUC0 442 aa12.24□□□□□ -0.45
PRPF39-204ENST00000553605 GALNT10Q86SR1 603 aa12.24□□□□□ -0.45
PRPF39-204ENST00000553605 MYLK4Q86YV6 388 aaPredicted RBP12.24□□□□□ -0.45
PRPF39-204ENST00000553605 PPIL6Q8IXY8 311 aa12.24□□□□□ -0.45
PRPF39-204ENST00000553605 EFHD2Q96C19 240 aaPredicted RBP12.24□□□□□ -0.45
PRPF39-204ENST00000553605 BTBD9Q96Q07 612 aa12.24□□□□□ -0.45
PRPF39-204ENST00000553605 NAP1L3Q99457 506 aaPredicted RBP12.24□□□□□ -0.45
PRPF39-204ENST00000553605 TRIM5Q9C035 493 aa12.24□□□□□ -0.45
PRPF39-204ENST00000553605 BHLHE41Q9C0J9 482 aaPredicted RBP12.24□□□□□ -0.45
PRPF39-204ENST00000553605 POPDC3Q9HBV1 291 aa12.24□□□□□ -0.45
PRPF39-204ENST00000553605 PCDHGA11Q9Y5H2 935 aa12.24□□□□□ -0.45
PRPF39-204ENST00000553605 PSAT1Q9Y617 370 aa12.24□□□□□ -0.45
PRPF39-204ENST00000553605 IGHV4-61A0A0C4DH41 118 aa12.23□□□□□ -0.45
PRPF39-204ENST00000553605 SHISA8B8ZZ34 492 aa12.23□□□□□ -0.45
PRPF39-204ENST00000553605 NDUFS8O00217 210 aa12.23□□□□□ -0.45
PRPF39-204ENST00000553605 CXCL13O43927 109 aa12.23□□□□□ -0.45
PRPF39-204ENST00000553605 ERAL1O75616 437 aaKnown RBP12.23□□□□□ -0.45
PRPF39-204ENST00000553605 CSNK2A2P19784 350 aaPredicted RBP12.23□□□□□ -0.45
PRPF39-204ENST00000553605 PDLIM4P50479 330 aa12.23□□□□□ -0.45
PRPF39-204ENST00000553605 FABP6P51161 128 aa12.23□□□□□ -0.45
PRPF39-204ENST00000553605 CORO7P57737 925 aa12.23□□□□□ -0.45
PRPF39-204ENST00000553605 GPX6P59796 221 aa12.23□□□□□ -0.45
PRPF39-204ENST00000553605 MRPS22P82650 360 aaKnown RBP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms