RNA–Protein interactions for RNA: ENST00000552890.5

TRAFD1-208, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-208ENST00000552890 OR52B2Q96RD2 323 aa9.43□□□□□ -0.9
TRAFD1-208ENST00000552890 ADOQ96SZ5 270 aa9.43□□□□□ -0.9
TRAFD1-208ENST00000552890 SLC35A5Q9BS91 424 aa9.43□□□□□ -0.9
TRAFD1-208ENST00000552890 ZDHHC11Q9H8X9 412 aa9.43□□□□□ -0.9
TRAFD1-208ENST00000552890 LIN28AQ9H9Z2 209 aaKnown RBP9.43□□□□□ -0.9
TRAFD1-208ENST00000552890 EQTNQ9NQ60 294 aa9.43□□□□□ -0.9
TRAFD1-208ENST00000552890 FGFR1OP2Q9NVK5 253 aa9.43□□□□□ -0.9
TRAFD1-208ENST00000552890 SUCOQ9UBS9 1254 aaKnown RBP9.43□□□□□ -0.9
TRAFD1-208ENST00000552890 LEF1Q9UJU2 399 aaPredicted RBP9.43□□□□□ -0.9
TRAFD1-208ENST00000552890 DCTN4Q9UJW0 460 aa9.43□□□□□ -0.9
TRAFD1-208ENST00000552890 A0A087WZY1 265 aa9.42□□□□□ -0.9
TRAFD1-208ENST00000552890 A0A1W2PP18 115 aa9.42□□□□□ -0.9
TRAFD1-208ENST00000552890 A0A1W2PQD3 144 aa9.42□□□□□ -0.9
TRAFD1-208ENST00000552890 A0A1W2PS29 197 aa9.42□□□□□ -0.9
TRAFD1-208ENST00000552890 BBIP1A8MTZ0 92 aa9.42□□□□□ -0.9
TRAFD1-208ENST00000552890 NDUFAB1O14561 156 aa9.42□□□□□ -0.9
TRAFD1-208ENST00000552890 MAN1A2O60476 641 aa9.42□□□□□ -0.9
TRAFD1-208ENST00000552890 TSPAN2O60636 221 aa9.42□□□□□ -0.9
TRAFD1-208ENST00000552890 TRIM3O75382 744 aaPredicted RBP9.42□□□□□ -0.9
TRAFD1-208ENST00000552890 STX11O75558 287 aa9.42□□□□□ -0.9
TRAFD1-208ENST00000552890 CBX6O95503 412 aa9.42□□□□□ -0.9
TRAFD1-208ENST00000552890 CPSF4O95639 269 aaKnown RBP9.42□□□□□ -0.9
TRAFD1-208ENST00000552890 CCL3P10147 92 aa9.42□□□□□ -0.9
TRAFD1-208ENST00000552890 TBXA2RP21731 343 aa9.42□□□□□ -0.9
TRAFD1-208ENST00000552890 EVI2BP34910 448 aa9.42□□□□□ -0.9
TRAFD1-208ENST00000552890 FBXW4P57775 412 aa9.42□□□□□ -0.9
TRAFD1-208ENST00000552890 GUCY1A3Q02108 690 aa9.42□□□□□ -0.9
TRAFD1-208ENST00000552890 ESPL1Q14674 2120 aa9.42□□□□□ -0.9
TRAFD1-208ENST00000552890 GLYR1Q49A26 553 aaPredicted RBP9.42□□□□□ -0.9
TRAFD1-208ENST00000552890 C6orf10Q5SRN2 563 aa9.42□□□□□ -0.9
TRAFD1-208ENST00000552890 AP1ARQ63HQ0 302 aa9.42□□□□□ -0.9
TRAFD1-208ENST00000552890 TMEM211Q6ICI0 200 aa9.42□□□□□ -0.9
TRAFD1-208ENST00000552890 AAGABQ6PD74 315 aa9.42□□□□□ -0.9
TRAFD1-208ENST00000552890 ANGPTL8Q6UXH0 198 aa9.42□□□□□ -0.9
TRAFD1-208ENST00000552890 ZNF227Q86WZ6 799 aa9.42□□□□□ -0.9
TRAFD1-208ENST00000552890 PLCZ1Q86YW0 608 aa9.42□□□□□ -0.9
TRAFD1-208ENST00000552890 PCYOX1LQ8NBM8 494 aa9.42□□□□□ -0.9
TRAFD1-208ENST00000552890 OR5M3Q8NGP4 307 aa9.42□□□□□ -0.9
TRAFD1-208ENST00000552890 RMND5BQ96G75 393 aaPredicted RBP9.42□□□□□ -0.9
TRAFD1-208ENST00000552890 TTTY12Q9BZ98 90 aa9.42□□□□□ -0.9
TRAFD1-208ENST00000552890 NMUR2Q9GZQ4 415 aa9.42□□□□□ -0.9
TRAFD1-208ENST00000552890 LDAHQ9H6V9 325 aa9.42□□□□□ -0.9
TRAFD1-208ENST00000552890 EXO5Q9H790 373 aa9.42□□□□□ -0.9
TRAFD1-208ENST00000552890 CXorf36Q9H7Y0 433 aa9.42□□□□□ -0.9
TRAFD1-208ENST00000552890 SIRT3Q9NTG7 399 aaPredicted RBP9.42□□□□□ -0.9
TRAFD1-208ENST00000552890 CNOT11Q9UKZ1 510 aaKnown RBP9.42□□□□□ -0.9
TRAFD1-208ENST00000552890 NDUFAF1Q9Y375 327 aa9.42□□□□□ -0.9
TRAFD1-208ENST00000552890 CSAG2Q9Y5P2 127 aa9.42□□□□□ -0.9
TRAFD1-208ENST00000552890 WIF1Q9Y5W5 379 aa9.42□□□□□ -0.9
TRAFD1-208ENST00000552890 HELZ2Q9BYK8 2649 aaKnown RBP9.42□□□□□ -0.9
TRAFD1-208ENST00000552890 SVILO95425 2214 aa9.41□□□□□ -0.9
TRAFD1-208ENST00000552890 SMG1Q96Q15 3661 aaKnown RBP9.41□□□□□ -0.9
TRAFD1-208ENST00000552890 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.41□□□□□ -0.9
TRAFD1-208ENST00000552890 A0A096LPI6 279 aa9.41□□□□□ -0.9
TRAFD1-208ENST00000552890 GMNCA6NCL1 334 aa9.41□□□□□ -0.9
TRAFD1-208ENST00000552890 FIGNL2A6NMB9 653 aa9.41□□□□□ -0.9
TRAFD1-208ENST00000552890 ALG1L2C9J202 215 aa9.41□□□□□ -0.9
TRAFD1-208ENST00000552890 NPIPA5E9PKD4 350 aa9.41□□□□□ -0.9
TRAFD1-208ENST00000552890 SNPHO15079 494 aa9.41□□□□□ -0.9
TRAFD1-208ENST00000552890 SCN2BO60939 215 aa9.41□□□□□ -0.9
TRAFD1-208ENST00000552890 ICOSLGO75144 302 aa9.41□□□□□ -0.9
TRAFD1-208ENST00000552890 UGT2B11O75310 529 aa9.41□□□□□ -0.9
TRAFD1-208ENST00000552890 GLSO94925 669 aaPredicted RBP9.41□□□□□ -0.9
TRAFD1-208ENST00000552890 KCNK2O95069 426 aa9.41□□□□□ -0.9
TRAFD1-208ENST00000552890 ACTL6AO96019 429 aa9.41□□□□□ -0.9
TRAFD1-208ENST00000552890 IGHG3P01860 377 aa9.41□□□□□ -0.9
TRAFD1-208ENST00000552890 SNRPB2P08579 225 aaKnown RBP9.41□□□□□ -0.9
TRAFD1-208ENST00000552890 GABRA1P14867 456 aa9.41□□□□□ -0.9
TRAFD1-208ENST00000552890 UQCRBP14927 111 aa9.41□□□□□ -0.9
TRAFD1-208ENST00000552890 ABOP16442 354 aa9.41□□□□□ -0.9
TRAFD1-208ENST00000552890 FKBP2P26885 142 aaKnown RBP9.41□□□□□ -0.9
TRAFD1-208ENST00000552890 PTPN6P29350 595 aa9.41□□□□□ -0.9
TRAFD1-208ENST00000552890 MAN2A2P49641 1150 aa9.41□□□□□ -0.9
TRAFD1-208ENST00000552890 WNT3P56703 355 aa9.41□□□□□ -0.9
TRAFD1-208ENST00000552890 CORO7P57737 925 aa9.41□□□□□ -0.9
TRAFD1-208ENST00000552890 EEFSECP57772 596 aaKnown RBP9.41□□□□□ -0.9
TRAFD1-208ENST00000552890 DUSP8Q13202 625 aa9.41□□□□□ -0.9
TRAFD1-208ENST00000552890 ZNF630Q2M218 657 aaPredicted RBP9.41□□□□□ -0.9
TRAFD1-208ENST00000552890 ARHGAP11BQ3KRB8 267 aa9.41□□□□□ -0.9
TRAFD1-208ENST00000552890 TIGD2Q4W5G0 525 aa9.41□□□□□ -0.9
TRAFD1-208ENST00000552890 AGKQ53H12 422 aa9.41□□□□□ -0.9
TRAFD1-208ENST00000552890 PRAMEF8Q5VWM4 474 aa9.41□□□□□ -0.9
TRAFD1-208ENST00000552890 PRAMEF7Q5VXH5 474 aa9.41□□□□□ -0.9
TRAFD1-208ENST00000552890 SAXO2Q658L1 398 aa9.41□□□□□ -0.9
TRAFD1-208ENST00000552890 ENPP6Q6UWR7 440 aa9.41□□□□□ -0.9
TRAFD1-208ENST00000552890 MAVSQ7Z434 540 aa9.41□□□□□ -0.9
TRAFD1-208ENST00000552890 SLC30A8Q8IWU4 369 aa9.41□□□□□ -0.9
TRAFD1-208ENST00000552890 CMIPQ8IY22 773 aa9.41□□□□□ -0.9
TRAFD1-208ENST00000552890 SLC16A11Q8NCK7 471 aa9.41□□□□□ -0.9
TRAFD1-208ENST00000552890 CHDHQ8NE62 594 aaPredicted RBP9.41□□□□□ -0.9
TRAFD1-208ENST00000552890 BHLHE22Q8NFJ8 381 aaPredicted RBP9.41□□□□□ -0.9
TRAFD1-208ENST00000552890 TOR1AIP2Q8NFQ8 470 aa9.41□□□□□ -0.9
TRAFD1-208ENST00000552890 OR4K17Q8NGC6 315 aa9.41□□□□□ -0.9
TRAFD1-208ENST00000552890 FAM110BQ8TC76 370 aa9.41□□□□□ -0.9
TRAFD1-208ENST00000552890 HGDQ93099 445 aa9.41□□□□□ -0.9
TRAFD1-208ENST00000552890 GIMAP5Q96F15 307 aa9.41□□□□□ -0.9
TRAFD1-208ENST00000552890 JSRP1Q96MG2 331 aaPredicted RBP9.41□□□□□ -0.9
TRAFD1-208ENST00000552890 TRNT1Q96Q11 434 aaKnown RBP9.41□□□□□ -0.9
TRAFD1-208ENST00000552890 TAAR6Q96RI8 345 aa9.41□□□□□ -0.9
TRAFD1-208ENST00000552890 TMEM120AQ9BXJ8 343 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms