RNA–Protein interactions for RNA: ENST00000552839.6

TMEM116-218, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-218ENST00000552839 ITPAQ9BY32 194 aa10.49□□□□□ -0.73
TMEM116-218ENST00000552839 WWTR1Q9GZV5 400 aa10.49□□□□□ -0.73
TMEM116-218ENST00000552839 MYLK2Q9H1R3 596 aa10.49□□□□□ -0.73
TMEM116-218ENST00000552839 ANKRA2Q9H9E1 313 aa10.49□□□□□ -0.73
TMEM116-218ENST00000552839 CACYBPQ9HB71 228 aaKnown RBP10.49□□□□□ -0.73
TMEM116-218ENST00000552839 FOLH1BQ9HBA9 442 aa10.49□□□□□ -0.73
TMEM116-218ENST00000552839 C19orf53Q9UNZ5 99 aaPredicted RBP10.49□□□□□ -0.73
TMEM116-218ENST00000552839 CORO2BQ9UQ03 480 aa10.49□□□□□ -0.73
TMEM116-218ENST00000552839 ERVK-11Q9UQG0 969 aa10.49□□□□□ -0.73
TMEM116-218ENST00000552839 CAPN14A8MX76 684 aa10.48□□□□□ -0.73
TMEM116-218ENST00000552839 WWP2O00308 870 aa10.48□□□□□ -0.73
TMEM116-218ENST00000552839 UPK1AO00322 258 aa10.48□□□□□ -0.73
TMEM116-218ENST00000552839 ZNHIT1O43257 154 aa10.48□□□□□ -0.73
TMEM116-218ENST00000552839 HS6ST1O60243 411 aa10.48□□□□□ -0.73
TMEM116-218ENST00000552839 NADKO95544 446 aaPredicted RBP10.48□□□□□ -0.73
TMEM116-218ENST00000552839 IL12BP29460 328 aa10.48□□□□□ -0.73
TMEM116-218ENST00000552839 PRDX6P30041 224 aa10.48□□□□□ -0.73
TMEM116-218ENST00000552839 CRATP43155 626 aa10.48□□□□□ -0.73
TMEM116-218ENST00000552839 SSR4P51571 173 aa10.48□□□□□ -0.73
TMEM116-218ENST00000552839 NR0B1P51843 470 aaKnown RBP10.48□□□□□ -0.73
TMEM116-218ENST00000552839 PSMD4P55036 377 aaKnown RBP10.48□□□□□ -0.73
TMEM116-218ENST00000552839 PSPHP78330 225 aa10.48□□□□□ -0.73
TMEM116-218ENST00000552839 OC90Q02509 493 aaPredicted RBP10.48□□□□□ -0.73
TMEM116-218ENST00000552839 GAB1Q13480 694 aa10.48□□□□□ -0.73
TMEM116-218ENST00000552839 EBPQ15125 230 aaKnown RBP10.48□□□□□ -0.73
TMEM116-218ENST00000552839 TRMT5Q32P41 509 aaKnown RBP10.48□□□□□ -0.73
TMEM116-218ENST00000552839 COQ5Q5HYK3 327 aa10.48□□□□□ -0.73
TMEM116-218ENST00000552839 MEX3BQ6ZN04 569 aaKnown RBP10.48□□□□□ -0.73
TMEM116-218ENST00000552839 C16orf62Q7Z3J2 963 aa10.48□□□□□ -0.73
TMEM116-218ENST00000552839 C6orf120Q7Z4R8 191 aa10.48□□□□□ -0.73
TMEM116-218ENST00000552839 RPS19BP1Q86WX3 136 aaKnown RBP10.48□□□□□ -0.73
TMEM116-218ENST00000552839 SLC44A2Q8IWA5 706 aaPredicted RBP10.48□□□□□ -0.73
TMEM116-218ENST00000552839 C9orf40Q8IXQ3 194 aa10.48□□□□□ -0.73
TMEM116-218ENST00000552839 OR2L13Q8N349 312 aa10.48□□□□□ -0.73
TMEM116-218ENST00000552839 APCDD1LQ8NCL9 501 aa10.48□□□□□ -0.73
TMEM116-218ENST00000552839 NFAM1Q8NET5 270 aaPredicted RBP10.48□□□□□ -0.73
TMEM116-218ENST00000552839 NUBPLQ8TB37 319 aa10.48□□□□□ -0.73
TMEM116-218ENST00000552839 PNPT1Q8TCS8 783 aaKnown RBP10.48□□□□□ -0.73
TMEM116-218ENST00000552839 ELP5Q8TE02 316 aa10.48□□□□□ -0.73
TMEM116-218ENST00000552839 NPAS2Q99743 824 aa10.48□□□□□ -0.73
TMEM116-218ENST00000552839 YIPF4Q9BSR8 244 aa10.48□□□□□ -0.73
TMEM116-218ENST00000552839 CCDC106Q9BWC9 280 aa10.48□□□□□ -0.73
TMEM116-218ENST00000552839 ACTRT3Q9BYD9 372 aa10.48□□□□□ -0.73
TMEM116-218ENST00000552839 HES7Q9BYE0 225 aa10.48□□□□□ -0.73
TMEM116-218ENST00000552839 TSPAN10Q9H1Z9 355 aaPredicted RBP10.48□□□□□ -0.73
TMEM116-218ENST00000552839 CDCP1Q9H5V8 836 aa10.48□□□□□ -0.73
TMEM116-218ENST00000552839 EFCAB1Q9HAE3 211 aa10.48□□□□□ -0.73
TMEM116-218ENST00000552839 EXD2Q9NVH0 621 aa10.48□□□□□ -0.73
TMEM116-218ENST00000552839 TAGLN3Q9UI15 199 aa10.48□□□□□ -0.73
TMEM116-218ENST00000552839 PCDHGB3Q9Y5G1 929 aa10.48□□□□□ -0.73
TMEM116-218ENST00000552839 MTORP42345 2549 aa10.47□□□□□ -0.73
TMEM116-218ENST00000552839 C15orf38-AP3S2A0A0A6YYH1 394 aa10.47□□□□□ -0.73
TMEM116-218ENST00000552839 DUXAA6NLW8 204 aa10.47□□□□□ -0.73
TMEM116-218ENST00000552839 A8MVJ9 347 aa10.47□□□□□ -0.73
TMEM116-218ENST00000552839 C5orf58C9J3I9 102 aa10.47□□□□□ -0.73
TMEM116-218ENST00000552839 ITGA10O75578 1167 aa10.47□□□□□ -0.73
TMEM116-218ENST00000552839 AGR2O95994 175 aa10.47□□□□□ -0.73
TMEM116-218ENST00000552839 IGKV3-11P04433 115 aa10.47□□□□□ -0.73
TMEM116-218ENST00000552839 HMGN2P05204 90 aaKnown RBP10.47□□□□□ -0.73
TMEM116-218ENST00000552839 ATP6V1C1P21283 382 aa10.47□□□□□ -0.73
TMEM116-218ENST00000552839 MATN1P21941 496 aa10.47□□□□□ -0.73
TMEM116-218ENST00000552839 CDKN2CP42773 168 aa10.47□□□□□ -0.73
TMEM116-218ENST00000552839 CPA2P48052 419 aa10.47□□□□□ -0.73
TMEM116-218ENST00000552839 ST13P50502 369 aaKnown RBP10.47□□□□□ -0.73
TMEM116-218ENST00000552839 ART1P52961 327 aa10.47□□□□□ -0.73
TMEM116-218ENST00000552839 RPP38P78345 283 aaKnown RBP10.47□□□□□ -0.73
TMEM116-218ENST00000552839 PHC1P78364 1004 aa10.47□□□□□ -0.73
TMEM116-218ENST00000552839 MRPS22P82650 360 aaKnown RBP10.47□□□□□ -0.73
TMEM116-218ENST00000552839 MGAT2Q10469 447 aa10.47□□□□□ -0.73
TMEM116-218ENST00000552839 KRTCAP3Q53RY4 240 aa10.47□□□□□ -0.73
TMEM116-218ENST00000552839 ACER2Q5QJU3 275 aa10.47□□□□□ -0.73
TMEM116-218ENST00000552839 MFSD12Q6NUT3 480 aa10.47□□□□□ -0.73
TMEM116-218ENST00000552839 TNFAIP8L2Q6P589 184 aaPredicted RBP10.47□□□□□ -0.73
TMEM116-218ENST00000552839 ZCCHC12Q6PEW1 402 aa10.47□□□□□ -0.73
TMEM116-218ENST00000552839 OPN5Q6U736 354 aa10.47□□□□□ -0.73
TMEM116-218ENST00000552839 C3P1Q6ZMU1 363 aa10.47□□□□□ -0.73
TMEM116-218ENST00000552839 TRPM8Q7Z2W7 1104 aa10.47□□□□□ -0.73
TMEM116-218ENST00000552839 ARPINQ7Z6K5 226 aa10.47□□□□□ -0.73
TMEM116-218ENST00000552839 CLEC4FQ8N1N0 589 aa10.47□□□□□ -0.73
TMEM116-218ENST00000552839 HORMAD2Q8N7B1 307 aa10.47□□□□□ -0.73
TMEM116-218ENST00000552839 GTF2H4Q92759 462 aa10.47□□□□□ -0.73
TMEM116-218ENST00000552839 CTHRC1Q96CG8 243 aa10.47□□□□□ -0.73
TMEM116-218ENST00000552839 LCORQ96JN0 433 aaPredicted RBP10.47□□□□□ -0.73
TMEM116-218ENST00000552839 SIGLEC12Q96PQ1 595 aa10.47□□□□□ -0.73
TMEM116-218ENST00000552839 SH3GL1Q99961 368 aa10.47□□□□□ -0.73
TMEM116-218ENST00000552839 UTP23Q9BRU9 249 aaKnown RBP10.47□□□□□ -0.73
TMEM116-218ENST00000552839 THUMPD3Q9BV44 507 aaKnown RBP10.47□□□□□ -0.73
TMEM116-218ENST00000552839 TPT1P8Q9HAU6 139 aa10.47□□□□□ -0.73
TMEM116-218ENST00000552839 SIRT3Q9NTG7 399 aaPredicted RBP10.47□□□□□ -0.73
TMEM116-218ENST00000552839 HPF1Q9NWY4 346 aa10.47□□□□□ -0.73
TMEM116-218ENST00000552839 NDE1Q9NXR1 346 aa10.47□□□□□ -0.73
TMEM116-218ENST00000552839 PPIEQ9UNP9 301 aaKnown RBP10.47□□□□□ -0.73
TMEM116-218ENST00000552839 YARS2Q9Y2Z4 477 aaKnown RBP10.47□□□□□ -0.73
TMEM116-218ENST00000552839 L3MBTL1Q9Y468 752 aa10.47□□□□□ -0.73
TMEM116-218ENST00000552839 PCDHGB6Q9Y5F9 930 aa10.47□□□□□ -0.73
TMEM116-218ENST00000552839 PRRC2AP48634 2157 aaKnown RBP10.47□□□□□ -0.73
TMEM116-218ENST00000552839 INTS1Q8N201 2190 aaKnown RBP10.47□□□□□ -0.73
TMEM116-218ENST00000552839 TACC2O95359 2948 aa10.46□□□□□ -0.73
TMEM116-218ENST00000552839 ASPDHA6ND91 283 aa10.46□□□□□ -0.73
TMEM116-218ENST00000552839 FRG2CA6NGY1 282 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms