RNA–Protein interactions for RNA: ENST00000552208.1

LSM6P2-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM6P2, Length 177 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P2-201ENST00000552208 EXOGQ9Y2C4 368 aaKnown RBP3.37□□□□□ -1.87
LSM6P2-201ENST00000552208 FAM240BA0A1B0GVZ2 78 aa3.36□□□□□ -1.87
LSM6P2-201ENST00000552208 A0A1W2PNV4 684 aa3.36□□□□□ -1.87
LSM6P2-201ENST00000552208 HELTA6NFD8 242 aa3.36□□□□□ -1.87
LSM6P2-201ENST00000552208 ARHGEF33A8MVX0 844 aa3.36□□□□□ -1.87
LSM6P2-201ENST00000552208 HHLA1C9JL84 531 aa3.36□□□□□ -1.87
LSM6P2-201ENST00000552208 STX7O15400 261 aaKnown RBP3.36□□□□□ -1.87
LSM6P2-201ENST00000552208 LCMT2O60294 686 aaKnown RBP3.36□□□□□ -1.87
LSM6P2-201ENST00000552208 RAMP1O60894 148 aa3.36□□□□□ -1.87
LSM6P2-201ENST00000552208 RHBDL1O75783 438 aa3.36□□□□□ -1.87
LSM6P2-201ENST00000552208 CD1DP15813 335 aa3.36□□□□□ -1.87
LSM6P2-201ENST00000552208 PGCP20142 388 aa3.36□□□□□ -1.87
LSM6P2-201ENST00000552208 PRKACGP22612 351 aa3.36□□□□□ -1.87
LSM6P2-201ENST00000552208 ATP5IP56385 69 aaPredicted RBP3.36□□□□□ -1.87
LSM6P2-201ENST00000552208 RPL36AP83881 106 aaKnown RBP3.36□□□□□ -1.87
LSM6P2-201ENST00000552208 EWSR1Q01844 656 aaKnown RBP eCLIP3.36□□□□□ -1.87
LSM6P2-201ENST00000552208 BNIP1Q12981 228 aa3.36□□□□□ -1.87
LSM6P2-201ENST00000552208 MRPL28Q13084 256 aaKnown RBP3.36□□□□□ -1.87
LSM6P2-201ENST00000552208 TMEM187Q14656 261 aa3.36□□□□□ -1.87
LSM6P2-201ENST00000552208 UBE2V2Q15819 145 aa3.36□□□□□ -1.87
LSM6P2-201ENST00000552208 ECSCRQ19T08 205 aa3.36□□□□□ -1.87
LSM6P2-201ENST00000552208 C10orf120Q5SQS8 335 aa3.36□□□□□ -1.87
LSM6P2-201ENST00000552208 PHYHD1Q5SRE7 291 aa3.36□□□□□ -1.87
LSM6P2-201ENST00000552208 AGAP7PQ5VUJ5 663 aa3.36□□□□□ -1.87
LSM6P2-201ENST00000552208 METAP1DQ6UB28 335 aaPredicted RBP3.36□□□□□ -1.87
LSM6P2-201ENST00000552208 LCLAT1Q6UWP7 414 aa3.36□□□□□ -1.87
LSM6P2-201ENST00000552208 Q6ZPB1 254 aaPredicted RBP3.36□□□□□ -1.87
LSM6P2-201ENST00000552208 STOX1Q6ZVD7 989 aa3.36□□□□□ -1.87
LSM6P2-201ENST00000552208 NUFIP2Q7Z417 695 aaKnown RBP3.36□□□□□ -1.87
LSM6P2-201ENST00000552208 KIAA1328Q86T90 577 aa3.36□□□□□ -1.87
LSM6P2-201ENST00000552208 DCUN1D3Q8IWE4 304 aa3.36□□□□□ -1.87
LSM6P2-201ENST00000552208 TMEM123Q8N131 208 aa3.36□□□□□ -1.87
LSM6P2-201ENST00000552208 NUP37Q8NFH4 326 aa3.36□□□□□ -1.87
LSM6P2-201ENST00000552208 OR1B1Q8NGR6 318 aa3.36□□□□□ -1.87
LSM6P2-201ENST00000552208 AKR7LQ8NHP1 331 aa3.36□□□□□ -1.87
LSM6P2-201ENST00000552208 ZNF519Q8TB69 540 aa3.36□□□□□ -1.87
LSM6P2-201ENST00000552208 SSC4DQ8WTU2 575 aa3.36□□□□□ -1.87
LSM6P2-201ENST00000552208 C11orf24Q96F05 449 aaPredicted RBP3.36□□□□□ -1.87
LSM6P2-201ENST00000552208 WBP1Q96G27 269 aa3.36□□□□□ -1.87
LSM6P2-201ENST00000552208 FAM173AQ9BQD7 235 aa3.36□□□□□ -1.87
LSM6P2-201ENST00000552208 NFKBIZQ9BYH8 718 aa3.36□□□□□ -1.87
LSM6P2-201ENST00000552208 SDF2L1Q9HCN8 221 aa3.36□□□□□ -1.87
LSM6P2-201ENST00000552208 DEPPQ9NTK1 212 aa3.36□□□□□ -1.87
LSM6P2-201ENST00000552208 MRPL39Q9NYK5 338 aaKnown RBP3.36□□□□□ -1.87
LSM6P2-201ENST00000552208 GALPQ9UBC7 116 aa3.36□□□□□ -1.87
LSM6P2-201ENST00000552208 SLC9A8Q9Y2E8 581 aa3.36□□□□□ -1.87
LSM6P2-201ENST00000552208 TMED5Q9Y3A6 229 aa3.36□□□□□ -1.87
LSM6P2-201ENST00000552208 PCSK5Q92824 1860 aa3.36□□□□□ -1.87
LSM6P2-201ENST00000552208 BCLAF3A2AJT9 711 aaKnown RBP3.35□□□□□ -1.87
LSM6P2-201ENST00000552208 FAM74A7A6NL05 159 aa3.35□□□□□ -1.87
LSM6P2-201ENST00000552208 OR52A4PA6NMU1 304 aa3.35□□□□□ -1.87
LSM6P2-201ENST00000552208 OR7A17O14581 309 aa3.35□□□□□ -1.87
LSM6P2-201ENST00000552208 CASKO14936 926 aa3.35□□□□□ -1.87
LSM6P2-201ENST00000552208 ZNF749O43361 778 aa3.35□□□□□ -1.87
LSM6P2-201ENST00000552208 TYROBPO43914 113 aa3.35□□□□□ -1.87
LSM6P2-201ENST00000552208 ERLIN1O75477 346 aa3.35□□□□□ -1.87
LSM6P2-201ENST00000552208 SERPINA3P01011 423 aa3.35□□□□□ -1.87
LSM6P2-201ENST00000552208 JCHAINP01591 159 aa3.35□□□□□ -1.87
LSM6P2-201ENST00000552208 SP1P08047 785 aa3.35□□□□□ -1.87
LSM6P2-201ENST00000552208 OR9G9P0C7N8 305 aa3.35□□□□□ -1.87
LSM6P2-201ENST00000552208 H2AFXP16104 143 aaPredicted RBP3.35□□□□□ -1.87
LSM6P2-201ENST00000552208 ZNF26P17031 533 aaPredicted RBP3.35□□□□□ -1.87
LSM6P2-201ENST00000552208 CCNCP24863 283 aa3.35□□□□□ -1.87
LSM6P2-201ENST00000552208 MAGEA5P43359 124 aa3.35□□□□□ -1.87
LSM6P2-201ENST00000552208 ATP5OP48047 213 aa3.35□□□□□ -1.87
LSM6P2-201ENST00000552208 CASP4P49662 377 aa3.35□□□□□ -1.87
LSM6P2-201ENST00000552208 GSCP56915 257 aaPredicted RBP3.35□□□□□ -1.87
LSM6P2-201ENST00000552208 SNRPD1P62314 119 aaKnown RBP3.35□□□□□ -1.87
LSM6P2-201ENST00000552208 RPS6P62753 249 aaKnown RBP3.35□□□□□ -1.87
LSM6P2-201ENST00000552208 NCBP1Q09161 790 aaKnown RBP3.35□□□□□ -1.87
LSM6P2-201ENST00000552208 CCL14Q16627 93 aa3.35□□□□□ -1.87
LSM6P2-201ENST00000552208 PCK2Q16822 640 aa3.35□□□□□ -1.87
LSM6P2-201ENST00000552208 MTHFSDQ2M296 383 aaKnown RBP3.35□□□□□ -1.87
LSM6P2-201ENST00000552208 FAM74A3Q4VXF1 159 aa3.35□□□□□ -1.87
LSM6P2-201ENST00000552208 WLSQ5T9L3 541 aa3.35□□□□□ -1.87
LSM6P2-201ENST00000552208 CCBE1Q6UXH8 406 aaPredicted RBP3.35□□□□□ -1.87
LSM6P2-201ENST00000552208 NLRP9Q7RTR0 991 aa3.35□□□□□ -1.87
LSM6P2-201ENST00000552208 C16orf62Q7Z3J2 963 aa3.35□□□□□ -1.87
LSM6P2-201ENST00000552208 HSD11B1LQ7Z5J1 315 aa3.35□□□□□ -1.87
LSM6P2-201ENST00000552208 TMEM17Q86X19 198 aa3.35□□□□□ -1.87
LSM6P2-201ENST00000552208 ZFAND4Q86XD8 727 aa3.35□□□□□ -1.87
LSM6P2-201ENST00000552208 CLDN19Q8N6F1 224 aa3.35□□□□□ -1.87
LSM6P2-201ENST00000552208 ZNF491Q8N8L2 437 aa3.35□□□□□ -1.87
LSM6P2-201ENST00000552208 OR52B6Q8NGF0 335 aa3.35□□□□□ -1.87
LSM6P2-201ENST00000552208 OR4D5Q8NGN0 318 aa3.35□□□□□ -1.87
LSM6P2-201ENST00000552208 OR52J3Q8NH60 311 aa3.35□□□□□ -1.87
LSM6P2-201ENST00000552208 FAM76AQ8TAV0 307 aa3.35□□□□□ -1.87
LSM6P2-201ENST00000552208 DNAJA3Q96EY1 480 aa3.35□□□□□ -1.87
LSM6P2-201ENST00000552208 C7orf34Q96L11 122 aa3.35□□□□□ -1.87
LSM6P2-201ENST00000552208 NODALQ96S42 347 aa3.35□□□□□ -1.87
LSM6P2-201ENST00000552208 RIT2Q99578 217 aa3.35□□□□□ -1.87
LSM6P2-201ENST00000552208 CABLES2Q9BTV7 478 aa3.35□□□□□ -1.87
LSM6P2-201ENST00000552208 RBM4Q9BWF3 364 aaKnown RBP3.35□□□□□ -1.87
LSM6P2-201ENST00000552208 POLR3FQ9H1D9 316 aaPredicted RBP3.35□□□□□ -1.87
LSM6P2-201ENST00000552208 WDR13Q9H1Z4 485 aa3.35□□□□□ -1.87
LSM6P2-201ENST00000552208 SPHK2Q9NRA0 654 aa3.35□□□□□ -1.87
LSM6P2-201ENST00000552208 ONECUT1Q9UBC0 465 aa3.35□□□□□ -1.87
LSM6P2-201ENST00000552208 LCMT1Q9UIC8 334 aa3.35□□□□□ -1.87
LSM6P2-201ENST00000552208 RPH3ALQ9UNE2 315 aa3.35□□□□□ -1.87
LSM6P2-201ENST00000552208 SALL1Q9NSC2 1324 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms