RNA–Protein interactions for RNA: ENST00000551691.5

LIMA1-208, Transcript of LIM domain and actin binding 1, humanhuman

TSL 3

Gene LIMA1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-208ENST00000551691 NCF1P14598 390 aaPredicted RBP3.42□□□□□ -1.86
LIMA1-208ENST00000551691 COX6B1P14854 86 aa3.42□□□□□ -1.86
LIMA1-208ENST00000551691 CD1EP15812 388 aa3.42□□□□□ -1.86
LIMA1-208ENST00000551691 TCN2P20062 427 aa3.42□□□□□ -1.86
LIMA1-208ENST00000551691 ITGA3P26006 1051 aa3.42□□□□□ -1.86
LIMA1-208ENST00000551691 HTR1EP28566 365 aa3.42□□□□□ -1.86
LIMA1-208ENST00000551691 PKLRP30613 574 aa3.42□□□□□ -1.86
LIMA1-208ENST00000551691 STIP1P31948 543 aaKnown RBP3.42□□□□□ -1.86
LIMA1-208ENST00000551691 CCKBRP32239 447 aa3.42□□□□□ -1.86
LIMA1-208ENST00000551691 CD70P32970 193 aa3.42□□□□□ -1.86
LIMA1-208ENST00000551691 DRD3P35462 400 aa3.42□□□□□ -1.86
LIMA1-208ENST00000551691 SLC6A12P48065 614 aa3.42□□□□□ -1.86
LIMA1-208ENST00000551691 RFX2P48378 723 aa3.42□□□□□ -1.86
LIMA1-208ENST00000551691 CCL11P51671 97 aa3.42□□□□□ -1.86
LIMA1-208ENST00000551691 SGSHP51688 502 aa3.42□□□□□ -1.86
LIMA1-208ENST00000551691 NOP14P78316 857 aaKnown RBP3.42□□□□□ -1.86
LIMA1-208ENST00000551691 ZNF415Q09FC8 603 aa3.42□□□□□ -1.86
LIMA1-208ENST00000551691 SCGB2A2Q13296 93 aa3.42□□□□□ -1.86
LIMA1-208ENST00000551691 EIF3IQ13347 325 aaKnown RBP3.42□□□□□ -1.86
LIMA1-208ENST00000551691 MFAP5Q13361 173 aa3.42□□□□□ -1.86
LIMA1-208ENST00000551691 PDE7AQ13946 482 aa3.42□□□□□ -1.86
LIMA1-208ENST00000551691 DPYSQ14117 519 aa3.42□□□□□ -1.86
LIMA1-208ENST00000551691 CA9Q16790 459 aa3.42□□□□□ -1.86
LIMA1-208ENST00000551691 TDRD12Q587J7 1177 aaKnown RBP3.42□□□□□ -1.86
LIMA1-208ENST00000551691 ARMCX4Q5H9R4 360 aa3.42□□□□□ -1.86
LIMA1-208ENST00000551691 OR4A47Q6IF82 309 aa3.42□□□□□ -1.86
LIMA1-208ENST00000551691 UGT3A1Q6NUS8 523 aa3.42□□□□□ -1.86
LIMA1-208ENST00000551691 CORO6Q6QEF8 472 aa3.42□□□□□ -1.86
LIMA1-208ENST00000551691 KDELC1Q6UW63 502 aa3.42□□□□□ -1.86
LIMA1-208ENST00000551691 BTNL8Q6UX41 500 aa3.42□□□□□ -1.86
LIMA1-208ENST00000551691 NHLRC1Q6VVB1 395 aa3.42□□□□□ -1.86
LIMA1-208ENST00000551691 RGS9BPQ6ZS82 235 aa3.42□□□□□ -1.86
LIMA1-208ENST00000551691 PHC2Q8IXK0 858 aa3.42□□□□□ -1.86
LIMA1-208ENST00000551691 ODF3L1Q8IXM7 274 aa3.42□□□□□ -1.86
LIMA1-208ENST00000551691 ELMOD2Q8IZ81 293 aa3.42□□□□□ -1.86
LIMA1-208ENST00000551691 APCDD1Q8J025 514 aa3.42□□□□□ -1.86
LIMA1-208ENST00000551691 CRYBG2Q8N1P7 616 aa3.42□□□□□ -1.86
LIMA1-208ENST00000551691 DNAJC22Q8N4W6 341 aa3.42□□□□□ -1.86
LIMA1-208ENST00000551691 RBMXL3Q8N7X1 1067 aaKnown RBP3.42□□□□□ -1.86
LIMA1-208ENST00000551691 DENND6BQ8NEG7 585 aa3.42□□□□□ -1.86
LIMA1-208ENST00000551691 TMEM185AQ8NFB2 350 aa3.42□□□□□ -1.86
LIMA1-208ENST00000551691 OR52E1Q8NGJ3 308 aa3.42□□□□□ -1.86
LIMA1-208ENST00000551691 OR13J1Q8NGT2 312 aa3.42□□□□□ -1.86
LIMA1-208ENST00000551691 C16orf52Q8NHV5 167 aa3.42□□□□□ -1.86
LIMA1-208ENST00000551691 RNASE8Q8TDE3 154 aaKnown RBP3.42□□□□□ -1.86
LIMA1-208ENST00000551691 DDI1Q8WTU0 396 aa3.42□□□□□ -1.86
LIMA1-208ENST00000551691 FAM216AQ8WUB2 273 aa3.42□□□□□ -1.86
LIMA1-208ENST00000551691 METTL21AQ8WXB1 218 aa3.42□□□□□ -1.86
LIMA1-208ENST00000551691 IRGQQ8WZA9 623 aa3.42□□□□□ -1.86
LIMA1-208ENST00000551691 GGHQ92820 318 aa3.42□□□□□ -1.86
LIMA1-208ENST00000551691 ART4Q93070 314 aa3.42□□□□□ -1.86
LIMA1-208ENST00000551691 FAM46BQ96A09 425 aa3.42□□□□□ -1.86
LIMA1-208ENST00000551691 TMEM186Q96B77 213 aa3.42□□□□□ -1.86
LIMA1-208ENST00000551691 SGK494Q96LW2 274 aa3.42□□□□□ -1.86
LIMA1-208ENST00000551691 TSSK2Q96PF2 358 aa3.42□□□□□ -1.86
LIMA1-208ENST00000551691 IL12RB2Q99665 862 aa3.42□□□□□ -1.86
LIMA1-208ENST00000551691 CTRCQ99895 268 aa3.42□□□□□ -1.86
LIMA1-208ENST00000551691 SSX3Q99909 188 aa3.42□□□□□ -1.86
LIMA1-208ENST00000551691 SYT15Q9BQS2 421 aa3.42□□□□□ -1.86
LIMA1-208ENST00000551691 SPRTNQ9H040 489 aaPredicted RBP3.42□□□□□ -1.86
LIMA1-208ENST00000551691 ATG10Q9H0Y0 220 aa3.42□□□□□ -1.86
LIMA1-208ENST00000551691 DPEP3Q9H4B8 488 aa3.42□□□□□ -1.86
LIMA1-208ENST00000551691 MAGEF1Q9HAY2 307 aa3.42□□□□□ -1.86
LIMA1-208ENST00000551691 NMUR1Q9HB89 426 aa3.42□□□□□ -1.86
LIMA1-208ENST00000551691 RDH14Q9HBH5 336 aa3.42□□□□□ -1.86
LIMA1-208ENST00000551691 HOMER3Q9NSC5 361 aa3.42□□□□□ -1.86
LIMA1-208ENST00000551691 SLC35D1Q9NTN3 355 aa3.42□□□□□ -1.86
LIMA1-208ENST00000551691 OCIAD1Q9NX40 245 aa3.42□□□□□ -1.86
LIMA1-208ENST00000551691 SMARCAL1Q9NZC9 954 aa3.42□□□□□ -1.86
LIMA1-208ENST00000551691 PTTG2Q9NZH5 202 aa3.42□□□□□ -1.86
LIMA1-208ENST00000551691 SUN2Q9UH99 717 aa3.42□□□□□ -1.86
LIMA1-208ENST00000551691 KCNS2Q9ULS6 477 aa3.42□□□□□ -1.86
LIMA1-208ENST00000551691 SNX6Q9UNH7 406 aa3.42□□□□□ -1.86
LIMA1-208ENST00000551691 FOXA2Q9Y261 457 aaPredicted RBP3.42□□□□□ -1.86
LIMA1-208ENST00000551691 NTNG1Q9Y2I2 539 aa3.42□□□□□ -1.86
LIMA1-208ENST00000551691 RRP15Q9Y3B9 282 aaKnown RBP3.42□□□□□ -1.86
LIMA1-208ENST00000551691 OR2W1Q9Y3N9 320 aa3.42□□□□□ -1.86
LIMA1-208ENST00000551691 ANK2Q01484 3957 aa3.42□□□□□ -1.86
LIMA1-208ENST00000551691 POLEQ07864 2286 aa3.42□□□□□ -1.86
LIMA1-208ENST00000551691 RYR3Q15413 4870 aa3.41□□□□□ -1.86
LIMA1-208ENST00000551691 TRAV18A0A075B6X5 111 aa3.41□□□□□ -1.86
LIMA1-208ENST00000551691 A0A087X0K7 114 aa3.41□□□□□ -1.86
LIMA1-208ENST00000551691 A0A0G2JPF8 293 aa3.41□□□□□ -1.86
LIMA1-208ENST00000551691 TMEM129A0AVI4 362 aa3.41□□□□□ -1.86
LIMA1-208ENST00000551691 HEATR9A2RTY3 570 aa3.41□□□□□ -1.86
LIMA1-208ENST00000551691 LILRA5A6NI73 299 aa3.41□□□□□ -1.86
LIMA1-208ENST00000551691 PP2D1A8MPX8 630 aa3.41□□□□□ -1.86
LIMA1-208ENST00000551691 GPR89AB7ZAQ6 455 aa3.41□□□□□ -1.86
LIMA1-208ENST00000551691 HNRNPCL3B7ZW38 293 aa3.41□□□□□ -1.86
LIMA1-208ENST00000551691 INAFM1C9JVW0 142 aa3.41□□□□□ -1.86
LIMA1-208ENST00000551691 E9PMD0 336 aa3.41□□□□□ -1.86
LIMA1-208ENST00000551691 RAD51BO15315 384 aa3.41□□□□□ -1.86
LIMA1-208ENST00000551691 PSMD3O43242 534 aa3.41□□□□□ -1.86
LIMA1-208ENST00000551691 GRID2O43424 1007 aa3.41□□□□□ -1.86
LIMA1-208ENST00000551691 B4GAT1O43505 415 aa3.41□□□□□ -1.86
LIMA1-208ENST00000551691 MAGEC1O60732 1142 aa3.41□□□□□ -1.86
LIMA1-208ENST00000551691 PDE9AO76083 593 aa3.41□□□□□ -1.86
LIMA1-208ENST00000551691 CLDN14O95500 239 aa3.41□□□□□ -1.86
LIMA1-208ENST00000551691 CSF2P04141 144 aa3.41□□□□□ -1.86
LIMA1-208ENST00000551691 SFTPBP07988 381 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms