RNA–Protein interactions for RNA: ENST00000550914.6

PTCH1-221, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-221ENST00000550914 CCDC151A5D8V7 595 aa11.6□□□□□ -0.55
PTCH1-221ENST00000550914 TRIM49D1C9J1S8 452 aa11.6□□□□□ -0.55
PTCH1-221ENST00000550914 SIAH2O43255 324 aa11.6□□□□□ -0.55
PTCH1-221ENST00000550914 FADS1O60427 444 aa11.6□□□□□ -0.55
PTCH1-221ENST00000550914 COQ9O75208 318 aa11.6□□□□□ -0.55
PTCH1-221ENST00000550914 SMNDC1O75940 238 aaKnown RBP eCLIP11.6□□□□□ -0.55
PTCH1-221ENST00000550914 CD8BP10966 210 aa11.6□□□□□ -0.55
PTCH1-221ENST00000550914 TSPAN8P19075 237 aa11.6□□□□□ -0.55
PTCH1-221ENST00000550914 TAC1P20366 129 aa11.6□□□□□ -0.55
PTCH1-221ENST00000550914 EVI2BP34910 448 aa11.6□□□□□ -0.55
PTCH1-221ENST00000550914 UGT2B10P36537 528 aa11.6□□□□□ -0.55
PTCH1-221ENST00000550914 KIR2DL2P43627 348 aaPredicted RBP11.6□□□□□ -0.55
PTCH1-221ENST00000550914 RAE1P78406 368 aaKnown RBP11.6□□□□□ -0.55
PTCH1-221ENST00000550914 ACSM2AQ08AH3 577 aa11.6□□□□□ -0.55
PTCH1-221ENST00000550914 ACKR1Q16570 336 aa11.6□□□□□ -0.55
PTCH1-221ENST00000550914 GLYR1Q49A26 553 aaPredicted RBP11.6□□□□□ -0.55
PTCH1-221ENST00000550914 ZNF678Q5SXM1 525 aa11.6□□□□□ -0.55
PTCH1-221ENST00000550914 UBAP2Q5T6F2 1119 aaKnown RBP11.6□□□□□ -0.55
PTCH1-221ENST00000550914 ACSM2BQ68CK6 577 aa11.6□□□□□ -0.55
PTCH1-221ENST00000550914 VWA1Q6PCB0 445 aa11.6□□□□□ -0.55
PTCH1-221ENST00000550914 ZNF474Q6S9Z5 364 aaPredicted RBP11.6□□□□□ -0.55
PTCH1-221ENST00000550914 C20orf204Q6ZNR8 217 aa11.6□□□□□ -0.55
PTCH1-221ENST00000550914 GPRIN3Q6ZVF9 776 aa11.6□□□□□ -0.55
PTCH1-221ENST00000550914 BTLAQ7Z6A9 289 aa11.6□□□□□ -0.55
PTCH1-221ENST00000550914 SLC44A2Q8IWA5 706 aaPredicted RBP11.6□□□□□ -0.55
PTCH1-221ENST00000550914 CNEP1R1Q8N9A8 125 aa11.6□□□□□ -0.55
PTCH1-221ENST00000550914 C16orf78Q8WTQ4 265 aa11.6□□□□□ -0.55
PTCH1-221ENST00000550914 DCAKDQ8WVC6 231 aa11.6□□□□□ -0.55
PTCH1-221ENST00000550914 CAVIN3Q969G5 261 aa11.6□□□□□ -0.55
PTCH1-221ENST00000550914 EXOSC8Q96B26 276 aaKnown RBP11.6□□□□□ -0.55
PTCH1-221ENST00000550914 EFHD2Q96C19 240 aaPredicted RBP11.6□□□□□ -0.55
PTCH1-221ENST00000550914 FAM111AQ96PZ2 611 aa11.6□□□□□ -0.55
PTCH1-221ENST00000550914 MED18Q9BUE0 208 aa11.6□□□□□ -0.55
PTCH1-221ENST00000550914 BDH2Q9BUT1 245 aa11.6□□□□□ -0.55
PTCH1-221ENST00000550914 ACPTQ9BZG2 426 aa11.6□□□□□ -0.55
PTCH1-221ENST00000550914 RNF122Q9H9V4 155 aa11.6□□□□□ -0.55
PTCH1-221ENST00000550914 SENP1Q9P0U3 644 aa11.6□□□□□ -0.55
PTCH1-221ENST00000550914 SONP18583 2426 aaKnown RBP11.6□□□□□ -0.55
PTCH1-221ENST00000550914 RTTNQ86VV8 2226 aa11.6□□□□□ -0.55
PTCH1-221ENST00000550914 STAB1Q9NY15 2570 aa11.6□□□□□ -0.55
PTCH1-221ENST00000550914 PRR14LQ5THK1 2151 aa11.6□□□□□ -0.55
PTCH1-221ENST00000550914 SERTM1A2A2V5 107 aa11.59□□□□□ -0.55
PTCH1-221ENST00000550914 MYO1GB0I1T2 1018 aa11.59□□□□□ -0.55
PTCH1-221ENST00000550914 C16orf97H3BN30 126 aa11.59□□□□□ -0.55
PTCH1-221ENST00000550914 HAX1O00165 279 aa11.59□□□□□ -0.55
PTCH1-221ENST00000550914 SUPT7LO94864 414 aa11.59□□□□□ -0.55
PTCH1-221ENST00000550914 CGAP01215 116 aa11.59□□□□□ -0.55
PTCH1-221ENST00000550914 ENO1P06733 434 aaKnown RBP11.59□□□□□ -0.55
PTCH1-221ENST00000550914 SNRPAP09012 282 aaKnown RBP11.59□□□□□ -0.55
PTCH1-221ENST00000550914 POU2F1P14859 743 aa11.59□□□□□ -0.55
PTCH1-221ENST00000550914 HK1P19367 917 aa11.59□□□□□ -0.55
PTCH1-221ENST00000550914 HMOX2P30519 316 aa11.59□□□□□ -0.55
PTCH1-221ENST00000550914 TIA1P31483 386 aaKnown RBP eCLIP11.59□□□□□ -0.55
PTCH1-221ENST00000550914 PKNOX1P55347 436 aa11.59□□□□□ -0.55
PTCH1-221ENST00000550914 CLDN15P56746 228 aa11.59□□□□□ -0.55
PTCH1-221ENST00000550914 PSG6Q00889 435 aa11.59□□□□□ -0.55
PTCH1-221ENST00000550914 UNC50Q53HI1 259 aa11.59□□□□□ -0.55
PTCH1-221ENST00000550914 TCHHL1Q5QJ38 904 aaPredicted RBP11.59□□□□□ -0.55
PTCH1-221ENST00000550914 LGSNQ5TDP6 509 aa11.59□□□□□ -0.55
PTCH1-221ENST00000550914 RAET1LQ5VY80 246 aa11.59□□□□□ -0.55
PTCH1-221ENST00000550914 SYT10Q6XYQ8 523 aa11.59□□□□□ -0.55
PTCH1-221ENST00000550914 Q71RC1 249 aaPredicted RBP11.59□□□□□ -0.55
PTCH1-221ENST00000550914 OR2M3Q8NG83 312 aa11.59□□□□□ -0.55
PTCH1-221ENST00000550914 OR7G2Q8NG99 324 aa11.59□□□□□ -0.55
PTCH1-221ENST00000550914 OR4N2Q8NGD1 307 aa11.59□□□□□ -0.55
PTCH1-221ENST00000550914 METTL6Q8TCB7 284 aa11.59□□□□□ -0.55
PTCH1-221ENST00000550914 ZNF845Q96IR2 970 aaPredicted RBP11.59□□□□□ -0.55
PTCH1-221ENST00000550914 MARK4Q96L34 752 aa11.59□□□□□ -0.55
PTCH1-221ENST00000550914 BBS4Q96RK4 519 aa11.59□□□□□ -0.55
PTCH1-221ENST00000550914 DSN1Q9H410 356 aa11.59□□□□□ -0.55
PTCH1-221ENST00000550914 PTGES2Q9H7Z7 377 aa11.59□□□□□ -0.55
PTCH1-221ENST00000550914 HHATLQ9HCP6 504 aa11.59□□□□□ -0.55
PTCH1-221ENST00000550914 FAM120CQ9NX05 1096 aaKnown RBP11.59□□□□□ -0.55
PTCH1-221ENST00000550914 KLHL28Q9NXS3 571 aa11.59□□□□□ -0.55
PTCH1-221ENST00000550914 TAS2R7Q9NYW3 318 aa11.59□□□□□ -0.55
PTCH1-221ENST00000550914 C6orf203Q9P0P8 240 aaPredicted RBP11.59□□□□□ -0.55
PTCH1-221ENST00000550914 MRTO4Q9UKD2 239 aaKnown RBP11.59□□□□□ -0.55
PTCH1-221ENST00000550914 A0A087WUV0 522 aaPredicted RBP11.58□□□□□ -0.56
PTCH1-221ENST00000550914 OR2M5A3KFT3 312 aa11.58□□□□□ -0.56
PTCH1-221ENST00000550914 POC1B-GALNT4F8VUJ3 575 aa11.58□□□□□ -0.56
PTCH1-221ENST00000550914 PSMG1O95456 288 aa11.58□□□□□ -0.56
PTCH1-221ENST00000550914 LY6G6DO95868 133 aa11.58□□□□□ -0.56
PTCH1-221ENST00000550914 IFI6P09912 130 aa11.58□□□□□ -0.56
PTCH1-221ENST00000550914 CTAGE8P0CG41 777 aa11.58□□□□□ -0.56
PTCH1-221ENST00000550914 FCGR2AP12318 317 aa11.58□□□□□ -0.56
PTCH1-221ENST00000550914 CHN1P15882 459 aa11.58□□□□□ -0.56
PTCH1-221ENST00000550914 DDCP20711 480 aa11.58□□□□□ -0.56
PTCH1-221ENST00000550914 IMPDH1P20839 514 aa11.58□□□□□ -0.56
PTCH1-221ENST00000550914 CCKARP32238 428 aa11.58□□□□□ -0.56
PTCH1-221ENST00000550914 RPS3AP61247 264 aaKnown RBP11.58□□□□□ -0.56
PTCH1-221ENST00000550914 ZNF763Q0D2J5 394 aa11.58□□□□□ -0.56
PTCH1-221ENST00000550914 ZNF155Q12901 538 aaPredicted RBP11.58□□□□□ -0.56
PTCH1-221ENST00000550914 LCP2Q13094 533 aa11.58□□□□□ -0.56
PTCH1-221ENST00000550914 GUSBP1Q15486 140 aa11.58□□□□□ -0.56
PTCH1-221ENST00000550914 DECR1Q16698 335 aa11.58□□□□□ -0.56
PTCH1-221ENST00000550914 TIFABQ6ZNK6 161 aa11.58□□□□□ -0.56
PTCH1-221ENST00000550914 SLC22A9Q8IVM8 553 aa11.58□□□□□ -0.56
PTCH1-221ENST00000550914 CTAGE4Q8IX94 777 aa11.58□□□□□ -0.56
PTCH1-221ENST00000550914 UBQLNLQ8IYU4 475 aa11.58□□□□□ -0.56
PTCH1-221ENST00000550914 UHMK1Q8TAS1 419 aaKnown RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms