RNA–Protein interactions for RNA: ENST00000550406.1

RAB5C-206, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-206ENST00000550406 KRT72Q14CN4 511 aa11.98□□□□□ -0.49
RAB5C-206ENST00000550406 SYPL1Q16563 259 aa11.98□□□□□ -0.49
RAB5C-206ENST00000550406 DECR1Q16698 335 aa11.98□□□□□ -0.49
RAB5C-206ENST00000550406 ARHGAP11BQ3KRB8 267 aa11.98□□□□□ -0.49
RAB5C-206ENST00000550406 AP1ARQ63HQ0 302 aa11.98□□□□□ -0.49
RAB5C-206ENST00000550406 SLC6A19Q695T7 634 aa11.98□□□□□ -0.49
RAB5C-206ENST00000550406 BICRALQ6AI39 1079 aa11.98□□□□□ -0.49
RAB5C-206ENST00000550406 SLC25A25Q6KCM7 469 aa11.98□□□□□ -0.49
RAB5C-206ENST00000550406 NANOGP8Q6NSW7 305 aa11.98□□□□□ -0.49
RAB5C-206ENST00000550406 ANGPTL8Q6UXH0 198 aa11.98□□□□□ -0.49
RAB5C-206ENST00000550406 RTL4Q6ZR62 310 aa11.98□□□□□ -0.49
RAB5C-206ENST00000550406 NUP54Q7Z3B4 507 aa11.98□□□□□ -0.49
RAB5C-206ENST00000550406 COX18Q8N8Q8 333 aa11.98□□□□□ -0.49
RAB5C-206ENST00000550406 Q8NA96 180 aa11.98□□□□□ -0.49
RAB5C-206ENST00000550406 FAM13CQ8NE31 585 aa11.98□□□□□ -0.49
RAB5C-206ENST00000550406 FBXO27Q8NI29 283 aa11.98□□□□□ -0.49
RAB5C-206ENST00000550406 SPPL2AQ8TCT8 520 aa11.98□□□□□ -0.49
RAB5C-206ENST00000550406 PAQR8Q8TEZ7 354 aa11.98□□□□□ -0.49
RAB5C-206ENST00000550406 TM9SF4Q92544 642 aa11.98□□□□□ -0.49
RAB5C-206ENST00000550406 COL21A1Q96P44 957 aa11.98□□□□□ -0.49
RAB5C-206ENST00000550406 SDF2Q99470 211 aa11.98□□□□□ -0.49
RAB5C-206ENST00000550406 GPATCH1Q9BRR8 931 aaKnown RBP11.98□□□□□ -0.49
RAB5C-206ENST00000550406 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.98□□□□□ -0.49
RAB5C-206ENST00000550406 NANOGQ9H9S0 305 aa11.98□□□□□ -0.49
RAB5C-206ENST00000550406 A0A0G2JMM0 328 aa11.97□□□□□ -0.49
RAB5C-206ENST00000550406 A0A1W2PPB8 328 aa11.97□□□□□ -0.49
RAB5C-206ENST00000550406 A0A1W2PRS3 328 aa11.97□□□□□ -0.49
RAB5C-206ENST00000550406 PINLYPA6NC86 204 aa11.97□□□□□ -0.49
RAB5C-206ENST00000550406 DUXAA6NLW8 204 aa11.97□□□□□ -0.49
RAB5C-206ENST00000550406 KIR3DP1A8MWS1 328 aa11.97□□□□□ -0.49
RAB5C-206ENST00000550406 ASNA1O43681 348 aa11.97□□□□□ -0.49
RAB5C-206ENST00000550406 SLC25A12O75746 678 aa11.97□□□□□ -0.49
RAB5C-206ENST00000550406 SOX30O94993 753 aa11.97□□□□□ -0.49
RAB5C-206ENST00000550406 CBX6O95503 412 aa11.97□□□□□ -0.49
RAB5C-206ENST00000550406 NPPAP01160 153 aa11.97□□□□□ -0.49
RAB5C-206ENST00000550406 SFTPCP11686 197 aa11.97□□□□□ -0.49
RAB5C-206ENST00000550406 SLC6A2P23975 617 aa11.97□□□□□ -0.49
RAB5C-206ENST00000550406 CASRP41180 1078 aa11.97□□□□□ -0.49
RAB5C-206ENST00000550406 MAGEA8P43361 318 aa11.97□□□□□ -0.49
RAB5C-206ENST00000550406 RFX3P48380 749 aa11.97□□□□□ -0.49
RAB5C-206ENST00000550406 GAS1P54826 345 aa11.97□□□□□ -0.49
RAB5C-206ENST00000550406 MTPNP58546 118 aa11.97□□□□□ -0.49
RAB5C-206ENST00000550406 ZNF169Q14929 603 aaPredicted RBP11.97□□□□□ -0.49
RAB5C-206ENST00000550406 ADRM1Q16186 407 aa11.97□□□□□ -0.49
RAB5C-206ENST00000550406 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.97□□□□□ -0.49
RAB5C-206ENST00000550406 ZNF766Q5HY98 468 aa11.97□□□□□ -0.49
RAB5C-206ENST00000550406 DCST2Q5T1A1 773 aa11.97□□□□□ -0.49
RAB5C-206ENST00000550406 SLC22A10Q63ZE4 541 aa11.97□□□□□ -0.49
RAB5C-206ENST00000550406 APOOLQ6UXV4 268 aa11.97□□□□□ -0.49
RAB5C-206ENST00000550406 PTRH1Q86Y79 214 aaKnown RBP11.97□□□□□ -0.49
RAB5C-206ENST00000550406 DND1Q8IYX4 353 aaKnown RBP11.97□□□□□ -0.49
RAB5C-206ENST00000550406 ANKFN1Q8N957 763 aa11.97□□□□□ -0.49
RAB5C-206ENST00000550406 GOLM1Q8NBJ4 401 aa11.97□□□□□ -0.49
RAB5C-206ENST00000550406 PCYOX1LQ8NBM8 494 aa11.97□□□□□ -0.49
RAB5C-206ENST00000550406 PSD4Q8NDX1 1056 aa11.97□□□□□ -0.49
RAB5C-206ENST00000550406 CMTM5Q96DZ9 223 aa11.97□□□□□ -0.49
RAB5C-206ENST00000550406 SGCZQ96LD1 299 aa11.97□□□□□ -0.49
RAB5C-206ENST00000550406 RTN4RQ9BZR6 473 aa11.97□□□□□ -0.49
RAB5C-206ENST00000550406 EFCAB1Q9HAE3 211 aa11.97□□□□□ -0.49
RAB5C-206ENST00000550406 KLHL1Q9NR64 748 aa11.97□□□□□ -0.49
RAB5C-206ENST00000550406 LUZP4Q9P127 313 aa11.97□□□□□ -0.49
RAB5C-206ENST00000550406 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.97□□□□□ -0.49
RAB5C-206ENST00000550406 TAGLN3Q9UI15 199 aa11.97□□□□□ -0.49
RAB5C-206ENST00000550406 B3GNT3Q9Y2A9 372 aa11.97□□□□□ -0.49
RAB5C-206ENST00000550406 PCDHGB6Q9Y5F9 930 aa11.97□□□□□ -0.49
RAB5C-206ENST00000550406 HRH3Q9Y5N1 445 aa11.97□□□□□ -0.49
RAB5C-206ENST00000550406 NPIPA5A0A0B4J1W7 369 aa11.96□□□□□ -0.49
RAB5C-206ENST00000550406 TRAV17A0A0B4J275 112 aa11.96□□□□□ -0.49
RAB5C-206ENST00000550406 NPIPA7E9PJI5 369 aa11.96□□□□□ -0.49
RAB5C-206ENST00000550406 NPIPB9F8W1W9 429 aa11.96□□□□□ -0.49
RAB5C-206ENST00000550406 G3V3Y1 287 aa11.96□□□□□ -0.49
RAB5C-206ENST00000550406 NME2P1O60361 137 aa11.96□□□□□ -0.49
RAB5C-206ENST00000550406 FADS1O60427 444 aa11.96□□□□□ -0.49
RAB5C-206ENST00000550406 FCMRO60667 390 aa11.96□□□□□ -0.49
RAB5C-206ENST00000550406 ICOSLGO75144 302 aa11.96□□□□□ -0.49
RAB5C-206ENST00000550406 CHRM4P08173 479 aa11.96□□□□□ -0.49
RAB5C-206ENST00000550406 TFPTP0C1Z6 253 aa11.96□□□□□ -0.49
RAB5C-206ENST00000550406 NPIPA8P0DM63 369 aa11.96□□□□□ -0.49
RAB5C-206ENST00000550406 NME2P22392 152 aa11.96□□□□□ -0.49
RAB5C-206ENST00000550406 PPIBP23284 216 aaKnown RBP11.96□□□□□ -0.49
RAB5C-206ENST00000550406 IL12BP29460 328 aa11.96□□□□□ -0.49
RAB5C-206ENST00000550406 CASP3P42574 277 aa11.96□□□□□ -0.49
RAB5C-206ENST00000550406 CRATP43155 626 aa11.96□□□□□ -0.49
RAB5C-206ENST00000550406 TMED10P49755 219 aaKnown RBP11.96□□□□□ -0.49
RAB5C-206ENST00000550406 DSTNP60981 165 aa11.96□□□□□ -0.49
RAB5C-206ENST00000550406 PSPHP78330 225 aa11.96□□□□□ -0.49
RAB5C-206ENST00000550406 TXNL4AP83876 142 aaKnown RBP11.96□□□□□ -0.49
RAB5C-206ENST00000550406 FADDQ13158 208 aa11.96□□□□□ -0.49
RAB5C-206ENST00000550406 GRAMD1BQ3KR37 738 aa11.96□□□□□ -0.49
RAB5C-206ENST00000550406 SOWAHCQ53LP3 525 aaPredicted RBP11.96□□□□□ -0.49
RAB5C-206ENST00000550406 RABL3Q5HYI8 236 aa11.96□□□□□ -0.49
RAB5C-206ENST00000550406 PRAMEF20Q5VT98 475 aa11.96□□□□□ -0.49
RAB5C-206ENST00000550406 TMEM81Q6P7N7 255 aa11.96□□□□□ -0.49
RAB5C-206ENST00000550406 HACD2Q6Y1H2 254 aa11.96□□□□□ -0.49
RAB5C-206ENST00000550406 TRPM8Q7Z2W7 1104 aa11.96□□□□□ -0.49
RAB5C-206ENST00000550406 GALNTL5Q7Z4T8 443 aa11.96□□□□□ -0.49
RAB5C-206ENST00000550406 SULF2Q8IWU5 870 aa11.96□□□□□ -0.49
RAB5C-206ENST00000550406 FBXW8Q8N3Y1 598 aa11.96□□□□□ -0.49
RAB5C-206ENST00000550406 LSM14AQ8ND56 463 aaKnown RBP11.96□□□□□ -0.49
RAB5C-206ENST00000550406 OR4C3Q8NH37 302 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms