RNA–Protein interactions for RNA: ENST00000550376.5

PRDM4-205, Transcript of PR/SET domain 4, humanhuman

TSL 1 (best)

Gene PRDM4, Length 2,591 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-205ENST00000550376 CYP7B1O75881 506 aa19.51■□□□□ 0.71
PRDM4-205ENST00000550376 TP53P04637 393 aaPredicted RBP19.51■□□□□ 0.71
PRDM4-205ENST00000550376 ALOX5P09917 674 aa19.51■□□□□ 0.71
PRDM4-205ENST00000550376 ITIH1P19827 911 aa19.51■□□□□ 0.71
PRDM4-205ENST00000550376 FNTBP49356 437 aa19.51■□□□□ 0.71
PRDM4-205ENST00000550376 PGDP52209 483 aa19.51■□□□□ 0.71
PRDM4-205ENST00000550376 C17orf82Q86X59 251 aaPredicted RBP19.51■□□□□ 0.71
PRDM4-205ENST00000550376 AHCYL2Q96HN2 611 aaKnown RBP19.51■□□□□ 0.71
PRDM4-205ENST00000550376 DOK1Q99704 481 aa19.51■□□□□ 0.71
PRDM4-205ENST00000550376 ALOXE3Q9BYJ1 711 aa19.51■□□□□ 0.71
PRDM4-205ENST00000550376 DSN1Q9H410 356 aa19.51■□□□□ 0.71
PRDM4-205ENST00000550376 EGLN3Q9H6Z9 239 aa19.51■□□□□ 0.71
PRDM4-205ENST00000550376 SRPX2O60687 465 aaPredicted RBP19.5■□□□□ 0.71
PRDM4-205ENST00000550376 GABRA4P48169 554 aa19.5■□□□□ 0.71
PRDM4-205ENST00000550376 AFF3P51826 1226 aaKnown RBP19.5■□□□□ 0.71
PRDM4-205ENST00000550376 CDC42P60953 191 aa19.5■□□□□ 0.71
PRDM4-205ENST00000550376 AQP6Q13520 282 aa19.5■□□□□ 0.71
PRDM4-205ENST00000550376 SLC16A12Q6ZSM3 486 aa19.5■□□□□ 0.71
PRDM4-205ENST00000550376 GJD3Q8N144 294 aa19.5■□□□□ 0.71
PRDM4-205ENST00000550376 VWA5B2Q8N398 1253 aa19.5■□□□□ 0.71
PRDM4-205ENST00000550376 AMER2Q8N7J2 671 aa19.5■□□□□ 0.71
PRDM4-205ENST00000550376 ZNF614Q8N883 585 aa19.5■□□□□ 0.71
PRDM4-205ENST00000550376 RNF217Q8TC41 542 aa19.5■□□□□ 0.71
PRDM4-205ENST00000550376 ZFAND2BQ8WV99 257 aa19.5■□□□□ 0.71
PRDM4-205ENST00000550376 MCHR1Q99705 422 aa19.5■□□□□ 0.71
PRDM4-205ENST00000550376 ARHGDIGQ99819 225 aa19.5■□□□□ 0.71
PRDM4-205ENST00000550376 LDHAL6BQ9BYZ2 381 aaPredicted RBP19.5■□□□□ 0.71
PRDM4-205ENST00000550376 PLA2G12AQ9BZM1 189 aa19.5■□□□□ 0.71
PRDM4-205ENST00000550376 DNAJC27Q9NZQ0 273 aa19.5■□□□□ 0.71
PRDM4-205ENST00000550376 IL20RAQ9UHF4 553 aa19.5■□□□□ 0.71
PRDM4-205ENST00000550376 EML5Q05BV3 1969 aa19.5■□□□□ 0.71
PRDM4-205ENST00000550376 OR1D4P47884 311 aa19.5■□□□□ 0.71
PRDM4-205ENST00000550376 ZNF155Q12901 538 aaPredicted RBP19.5■□□□□ 0.71
PRDM4-205ENST00000550376 GATAD2AQ86YP4 633 aa19.5■□□□□ 0.71
PRDM4-205ENST00000550376 SLC35F3Q8IY50 421 aa19.5■□□□□ 0.71
PRDM4-205ENST00000550376 B3GNT7Q8NFL0 401 aa19.5■□□□□ 0.71
PRDM4-205ENST00000550376 RBM18Q96H35 190 aaKnown RBP19.5■□□□□ 0.71
PRDM4-205ENST00000550376 CALML5Q9NZT1 146 aa19.5■□□□□ 0.71
PRDM4-205ENST00000550376 A0A1B0GVG6 124 aa19.49■□□□□ 0.71
PRDM4-205ENST00000550376 ARRDC5A6NEK1 342 aa19.49■□□□□ 0.71
PRDM4-205ENST00000550376 LILRA5A6NI73 299 aa19.49■□□□□ 0.71
PRDM4-205ENST00000550376 TGFBR1P36897 503 aa19.49■□□□□ 0.71
PRDM4-205ENST00000550376 MAGEA8P43361 318 aa19.49■□□□□ 0.71
PRDM4-205ENST00000550376 ZNF267Q14586 743 aaPredicted RBP19.49■□□□□ 0.71
PRDM4-205ENST00000550376 SPCS2Q15005 226 aa19.49■□□□□ 0.71
PRDM4-205ENST00000550376 GALNT12Q8IXK2 581 aa19.49■□□□□ 0.71
PRDM4-205ENST00000550376 PEX5LQ8IYB4 626 aa19.49■□□□□ 0.71
PRDM4-205ENST00000550376 ZNF420Q8TAQ5 688 aaPredicted RBP19.49■□□□□ 0.71
PRDM4-205ENST00000550376 RIT1Q92963 219 aa19.49■□□□□ 0.71
PRDM4-205ENST00000550376 CTHRC1Q96CG8 243 aa19.49■□□□□ 0.71
PRDM4-205ENST00000550376 CLIP3Q96DZ5 547 aa19.49■□□□□ 0.71
PRDM4-205ENST00000550376 FAM46AQ96IP4 442 aaKnown RBP19.49■□□□□ 0.71
PRDM4-205ENST00000550376 PDE7BQ9NP56 450 aa19.49■□□□□ 0.71
PRDM4-205ENST00000550376 TVP23BQ9NYZ1 205 aa19.49■□□□□ 0.71
PRDM4-205ENST00000550376 DHCR7Q9UBM7 475 aaKnown RBP19.49■□□□□ 0.71
PRDM4-205ENST00000550376 CLCA1A8K7I4 914 aa19.49■□□□□ 0.71
PRDM4-205ENST00000550376 ENTPD6O75354 484 aa19.49■□□□□ 0.71
PRDM4-205ENST00000550376 SLC35E2P0CK97 266 aa19.49■□□□□ 0.71
PRDM4-205ENST00000550376 RNH1P13489 461 aaKnown RBP19.49■□□□□ 0.71
PRDM4-205ENST00000550376 S1PR1P21453 382 aa19.49■□□□□ 0.71
PRDM4-205ENST00000550376 SMIM11AP58511 58 aa19.49■□□□□ 0.71
PRDM4-205ENST00000550376 ST3GAL4Q11206 333 aa19.49■□□□□ 0.71
PRDM4-205ENST00000550376 PRAMEF8Q5VWM4 474 aa19.49■□□□□ 0.71
PRDM4-205ENST00000550376 PRAMEF7Q5VXH5 474 aa19.49■□□□□ 0.71
PRDM4-205ENST00000550376 OGFOD3Q6PK18 319 aa19.49■□□□□ 0.71
PRDM4-205ENST00000550376 PRSS48Q7RTY5 328 aa19.49■□□□□ 0.71
PRDM4-205ENST00000550376 TMEM255BQ8WV15 326 aa19.49■□□□□ 0.71
PRDM4-205ENST00000550376 DIO2Q92813 273 aa19.49■□□□□ 0.71
PRDM4-205ENST00000550376 CNPPD1Q9BV87 410 aa19.49■□□□□ 0.71
PRDM4-205ENST00000550376 NDOR1Q9UHB4 597 aa19.49■□□□□ 0.71
PRDM4-205ENST00000550376 TMEM131Q92545 1883 aa19.48■□□□□ 0.71
PRDM4-205ENST00000550376 AGAP5A6NIR3 686 aa19.48■□□□□ 0.71
PRDM4-205ENST00000550376 HYAL3O43820 417 aaPredicted RBP19.48■□□□□ 0.71
PRDM4-205ENST00000550376 PIP5K1CO60331 668 aa19.48■□□□□ 0.71
PRDM4-205ENST00000550376 CCNA2P20248 432 aa19.48■□□□□ 0.71
PRDM4-205ENST00000550376 DBPQ10586 325 aaPredicted RBP19.48■□□□□ 0.71
PRDM4-205ENST00000550376 ILKQ13418 452 aa19.48■□□□□ 0.71
PRDM4-205ENST00000550376 ACSM5Q6NUN0 579 aa19.48■□□□□ 0.71
PRDM4-205ENST00000550376 ZNF730Q6ZMV8 503 aa19.48■□□□□ 0.71
PRDM4-205ENST00000550376 TTLL10Q6ZVT0 673 aa19.48■□□□□ 0.71
PRDM4-205ENST00000550376 PLEKHM3Q6ZWE6 761 aa19.48■□□□□ 0.71
PRDM4-205ENST00000550376 KIF18BQ86Y91 864 aa19.48■□□□□ 0.71
PRDM4-205ENST00000550376 DEPDC4Q8N2C3 294 aa19.48■□□□□ 0.71
PRDM4-205ENST00000550376 TCEANCQ8N8B7 351 aa19.48■□□□□ 0.71
PRDM4-205ENST00000550376 CDRT4Q8N9R6 151 aa19.48■□□□□ 0.71
PRDM4-205ENST00000550376 PLCL2Q9UPR0 1127 aa19.48■□□□□ 0.71
PRDM4-205ENST00000550376 A0A1W2PPC1 479 aa19.48■□□□□ 0.71
PRDM4-205ENST00000550376 NOL3O60936 208 aaKnown RBP19.48■□□□□ 0.71
PRDM4-205ENST00000550376 OXSR1O95747 527 aaPredicted RBP19.48■□□□□ 0.71
PRDM4-205ENST00000550376 PRKAR1BP31321 381 aa19.48■□□□□ 0.71
PRDM4-205ENST00000550376 MLLT10P55197 1068 aa19.48■□□□□ 0.71
PRDM4-205ENST00000550376 NFATC3Q12968 1075 aa19.48■□□□□ 0.71
PRDM4-205ENST00000550376 CLEC12AQ5QGZ9 265 aa19.48■□□□□ 0.71
PRDM4-205ENST00000550376 OR51Q1Q8NH59 317 aa19.48■□□□□ 0.71
PRDM4-205ENST00000550376 DNASE2BQ8WZ79 361 aa19.48■□□□□ 0.71
PRDM4-205ENST00000550376 RPL3LQ92901 407 aaKnown RBP19.48■□□□□ 0.71
PRDM4-205ENST00000550376 ZNF350Q9GZX5 532 aa19.48■□□□□ 0.71
PRDM4-205ENST00000550376 KLHL28Q9NXS3 571 aa19.48■□□□□ 0.71
PRDM4-205ENST00000550376 ZNF232Q9UNY5 417 aa19.48■□□□□ 0.71
PRDM4-205ENST00000550376 PCDHGB1Q9Y5G3 927 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms