RNA–Protein interactions for RNA: ENST00000549354.6

LINC00661-204, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best) BASIC

Gene LINC00661, Length 3,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-204ENST00000549354 APOOQ9BUR5 198 aa10.41□□□□□ -0.74
LINC00661-204ENST00000549354 PLA2G12AQ9BZM1 189 aa10.41□□□□□ -0.74
LINC00661-204ENST00000549354 OR51V1Q9H2C8 321 aa10.41□□□□□ -0.74
LINC00661-204ENST00000549354 MIXL1Q9H2W2 232 aa10.41□□□□□ -0.74
LINC00661-204ENST00000549354 TTYH1Q9H313 450 aaPredicted RBP10.41□□□□□ -0.74
LINC00661-204ENST00000549354 WASH6PQ9NQA3 447 aa10.41□□□□□ -0.74
LINC00661-204ENST00000549354 SNX7Q9UNH6 387 aa10.41□□□□□ -0.74
LINC00661-204ENST00000549354 HSPB11Q9Y547 144 aa10.41□□□□□ -0.74
LINC00661-204ENST00000549354 FRYQ5TBA9 3013 aa10.41□□□□□ -0.74
LINC00661-204ENST00000549354 OR2W5A6NFC9 320 aa10.4□□□□□ -0.74
LINC00661-204ENST00000549354 B4DXG7 233 aa10.4□□□□□ -0.74
LINC00661-204ENST00000549354 RNASET2O00584 256 aaKnown RBP10.4□□□□□ -0.74
LINC00661-204ENST00000549354 PGRMC2O15173 223 aa10.4□□□□□ -0.74
LINC00661-204ENST00000549354 UGT2B17O75795 530 aa10.4□□□□□ -0.74
LINC00661-204ENST00000549354 CHRNB1P11230 501 aa10.4□□□□□ -0.74
LINC00661-204ENST00000549354 KIAA1024LP59773 190 aa10.4□□□□□ -0.74
LINC00661-204ENST00000549354 LTB4RQ15722 352 aa10.4□□□□□ -0.74
LINC00661-204ENST00000549354 TATDN3Q17R31 274 aa10.4□□□□□ -0.74
LINC00661-204ENST00000549354 TRIM69Q86WT6 500 aa10.4□□□□□ -0.74
LINC00661-204ENST00000549354 PGBD3Q8N328 593 aa10.4□□□□□ -0.74
LINC00661-204ENST00000549354 C19orf18Q8NEA5 215 aa10.4□□□□□ -0.74
LINC00661-204ENST00000549354 FLCNQ8NFG4 579 aa10.4□□□□□ -0.74
LINC00661-204ENST00000549354 GPR32P1Q8NGA4 272 aa10.4□□□□□ -0.74
LINC00661-204ENST00000549354 UBE2E3Q969T4 207 aa10.4□□□□□ -0.74
LINC00661-204ENST00000549354 GAL3ST1Q99999 423 aa10.4□□□□□ -0.74
LINC00661-204ENST00000549354 CDCA4Q9BXL8 241 aa10.4□□□□□ -0.74
LINC00661-204ENST00000549354 PITHD1Q9GZP4 211 aaPredicted RBP10.4□□□□□ -0.74
LINC00661-204ENST00000549354 PCBD2Q9H0N5 130 aa10.4□□□□□ -0.74
LINC00661-204ENST00000549354 NT5DC2Q9H857 520 aa10.4□□□□□ -0.74
LINC00661-204ENST00000549354 PELI2Q9HAT8 420 aa10.4□□□□□ -0.74
LINC00661-204ENST00000549354 CORO2BQ9UQ03 480 aa10.4□□□□□ -0.74
LINC00661-204ENST00000549354 FAM240BA0A1B0GVZ2 78 aa10.4□□□□□ -0.74
LINC00661-204ENST00000549354 ERI3O43414 337 aaKnown RBP10.4□□□□□ -0.74
LINC00661-204ENST00000549354 SYPP08247 313 aa10.4□□□□□ -0.74
LINC00661-204ENST00000549354 RHCEP18577 417 aa10.4□□□□□ -0.74
LINC00661-204ENST00000549354 PPIBP23284 216 aaKnown RBP10.4□□□□□ -0.74
LINC00661-204ENST00000549354 QPRTQ15274 297 aa10.4□□□□□ -0.74
LINC00661-204ENST00000549354 TRIQKQ629K1 86 aa10.4□□□□□ -0.74
LINC00661-204ENST00000549354 C17orf64Q86WR6 236 aa10.4□□□□□ -0.74
LINC00661-204ENST00000549354 CYB561A3Q8NBI2 242 aa10.4□□□□□ -0.74
LINC00661-204ENST00000549354 OR6T1Q8NGN1 323 aa10.4□□□□□ -0.74
LINC00661-204ENST00000549354 MRGPRX1Q96LB2 322 aa10.4□□□□□ -0.74
LINC00661-204ENST00000549354 C12orf66Q96MD2 445 aa10.4□□□□□ -0.74
LINC00661-204ENST00000549354 CCDC32Q9BV29 185 aa10.4□□□□□ -0.74
LINC00661-204ENST00000549354 SLC22A4Q9H015 551 aa10.4□□□□□ -0.74
LINC00661-204ENST00000549354 HDHD2Q9H0R4 259 aa10.4□□□□□ -0.74
LINC00661-204ENST00000549354 DMRT3Q9NQL9 472 aa10.4□□□□□ -0.74
LINC00661-204ENST00000549354 A0A1W2PPV9 198 aa10.4□□□□□ -0.75
LINC00661-204ENST00000549354 ERVH48-1M5A8F1 160 aa10.4□□□□□ -0.75
LINC00661-204ENST00000549354 PLPP1O14494 284 aa10.4□□□□□ -0.75
LINC00661-204ENST00000549354 TMPRSS11DO60235 418 aa10.4□□□□□ -0.75
LINC00661-204ENST00000549354 MRPS14O60783 128 aaKnown RBP10.4□□□□□ -0.75
LINC00661-204ENST00000549354 REM1O75628 298 aa10.4□□□□□ -0.75
LINC00661-204ENST00000549354 MSL3P1P0C860 447 aa10.4□□□□□ -0.75
LINC00661-204ENST00000549354 CTBP2P56545 445 aa10.4□□□□□ -0.75
LINC00661-204ENST00000549354 RBBP4Q09028 425 aa10.4□□□□□ -0.75
LINC00661-204ENST00000549354 CAMK2BQ13554 666 aa10.4□□□□□ -0.75
LINC00661-204ENST00000549354 TJAP1Q5JTD0 557 aa10.4□□□□□ -0.75
LINC00661-204ENST00000549354 SAXO2Q658L1 398 aa10.4□□□□□ -0.75
LINC00661-204ENST00000549354 REEP3Q6NUK4 255 aa10.4□□□□□ -0.75
LINC00661-204ENST00000549354 RFPL4BQ6ZWI9 263 aa10.4□□□□□ -0.75
LINC00661-204ENST00000549354 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.4□□□□□ -0.75
LINC00661-204ENST00000549354 Q8N402 240 aa10.4□□□□□ -0.75
LINC00661-204ENST00000549354 TM9SF4Q92544 642 aa10.4□□□□□ -0.75
LINC00661-204ENST00000549354 CLIP3Q96DZ5 547 aa10.4□□□□□ -0.75
LINC00661-204ENST00000549354 SIPA1Q96FS4 1042 aa10.4□□□□□ -0.75
LINC00661-204ENST00000549354 MAPKAP1Q9BPZ7 522 aa10.4□□□□□ -0.75
LINC00661-204ENST00000549354 OR51I1Q9H343 314 aa10.4□□□□□ -0.75
LINC00661-204ENST00000549354 STUB1Q9UNE7 303 aa10.4□□□□□ -0.75
LINC00661-204ENST00000549354 MAU2Q9Y6X3 613 aa10.4□□□□□ -0.75
LINC00661-204ENST00000549354 TDRD6O60522 2096 aaKnown RBP10.4□□□□□ -0.75
LINC00661-204ENST00000549354 TRAV6A0A075B6T7 132 aa10.39□□□□□ -0.75
LINC00661-204ENST00000549354 TEX46H3BTG2 121 aa10.39□□□□□ -0.75
LINC00661-204ENST00000549354 GPR37L1O60883 481 aa10.39□□□□□ -0.75
LINC00661-204ENST00000549354 H1F0P07305 194 aaKnown RBP10.39□□□□□ -0.75
LINC00661-204ENST00000549354 GKN3PP0CG01 181 aa10.39□□□□□ -0.75
LINC00661-204ENST00000549354 SLC2A2P11168 524 aaPredicted RBP10.39□□□□□ -0.75
LINC00661-204ENST00000549354 HOXB6P17509 224 aaKnown RBP10.39□□□□□ -0.75
LINC00661-204ENST00000549354 ELAVL4P26378 380 aaKnown RBP10.39□□□□□ -0.75
LINC00661-204ENST00000549354 CCINQ13939 588 aa10.39□□□□□ -0.75
LINC00661-204ENST00000549354 FLYWCH1Q4VC44 716 aa10.39□□□□□ -0.75
LINC00661-204ENST00000549354 CEP78Q5JTW2 689 aa10.39□□□□□ -0.75
LINC00661-204ENST00000549354 EOGTQ5NDL2 527 aa10.39□□□□□ -0.75
LINC00661-204ENST00000549354 C18orf63Q68DL7 685 aa10.39□□□□□ -0.75
LINC00661-204ENST00000549354 PODNL1Q6PEZ8 512 aa10.39□□□□□ -0.75
LINC00661-204ENST00000549354 LAPTM4BQ86VI4 370 aa10.39□□□□□ -0.75
LINC00661-204ENST00000549354 VRK2Q86Y07 508 aa10.39□□□□□ -0.75
LINC00661-204ENST00000549354 BBS1Q8NFJ9 593 aa10.39□□□□□ -0.75
LINC00661-204ENST00000549354 OR4K5Q8NGD3 323 aa10.39□□□□□ -0.75
LINC00661-204ENST00000549354 OR10G6Q8NH81 332 aa10.39□□□□□ -0.75
LINC00661-204ENST00000549354 C9orf43Q8TAL5 461 aaPredicted RBP10.39□□□□□ -0.75
LINC00661-204ENST00000549354 HMGB4Q8WW32 186 aa10.39□□□□□ -0.75
LINC00661-204ENST00000549354 CXorf40BQ96DE9 158 aa10.39□□□□□ -0.75
LINC00661-204ENST00000549354 TREX2Q9BQ50 279 aaPredicted RBP10.39□□□□□ -0.75
LINC00661-204ENST00000549354 CCDC86Q9H6F5 360 aaKnown RBP10.39□□□□□ -0.75
LINC00661-204ENST00000549354 NCKAP1Q9Y2A7 1128 aa10.39□□□□□ -0.75
LINC00661-204ENST00000549354 COL6A3P12111 3177 aa10.39□□□□□ -0.75
LINC00661-204ENST00000549354 ZNF670-ZNF695F2Z2N8 137 aa10.39□□□□□ -0.75
LINC00661-204ENST00000549354 PLA2G10O15496 165 aa10.39□□□□□ -0.75
LINC00661-204ENST00000549354 KLHL18O94889 574 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms