RNA–Protein interactions for RNA: ENST00000548277.1

TRAFD1-205, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-205ENST00000548277 MNS1Q8NEH6 495 aa10.78□□□□□ -0.68
TRAFD1-205ENST00000548277 PPP1R14CQ8TAE6 165 aa10.78□□□□□ -0.68
TRAFD1-205ENST00000548277 PAFAH2Q99487 392 aa10.78□□□□□ -0.68
TRAFD1-205ENST00000548277 FMO2Q99518 471 aa10.78□□□□□ -0.68
TRAFD1-205ENST00000548277 SLC39A3Q9BRY0 314 aa10.78□□□□□ -0.68
TRAFD1-205ENST00000548277 FOLH1BQ9HBA9 442 aa10.78□□□□□ -0.68
TRAFD1-205ENST00000548277 FLRT3Q9NZU0 649 aa10.78□□□□□ -0.68
TRAFD1-205ENST00000548277 XPR1Q9UBH6 696 aa10.78□□□□□ -0.68
TRAFD1-205ENST00000548277 CLEC4AQ9UMR7 237 aa10.78□□□□□ -0.68
TRAFD1-205ENST00000548277 OR10H1Q9Y4A9 318 aa10.78□□□□□ -0.68
TRAFD1-205ENST00000548277 SHISA8B8ZZ34 492 aa10.77□□□□□ -0.69
TRAFD1-205ENST00000548277 OPN1LWP04000 364 aa10.77□□□□□ -0.69
TRAFD1-205ENST00000548277 IL3P08700 152 aa10.77□□□□□ -0.69
TRAFD1-205ENST00000548277 TBXA2RP21731 343 aa10.77□□□□□ -0.69
TRAFD1-205ENST00000548277 ECHS1P30084 290 aa10.77□□□□□ -0.69
TRAFD1-205ENST00000548277 CCKARP32238 428 aa10.77□□□□□ -0.69
TRAFD1-205ENST00000548277 MAGEA12P43365 314 aa10.77□□□□□ -0.69
TRAFD1-205ENST00000548277 DSCR4P56555 118 aaPredicted RBP10.77□□□□□ -0.69
TRAFD1-205ENST00000548277 CLDN20P56880 219 aa10.77□□□□□ -0.69
TRAFD1-205ENST00000548277 EFR3AQ14156 821 aa10.77□□□□□ -0.69
TRAFD1-205ENST00000548277 PON3Q15166 354 aa10.77□□□□□ -0.69
TRAFD1-205ENST00000548277 SGCBQ16585 318 aa10.77□□□□□ -0.69
TRAFD1-205ENST00000548277 ERCC6LQ2NKX8 1250 aa10.77□□□□□ -0.69
TRAFD1-205ENST00000548277 ZNF628Q5EBL2 1059 aa10.77□□□□□ -0.69
TRAFD1-205ENST00000548277 METTL2BQ6P1Q9 378 aaKnown RBP10.77□□□□□ -0.69
TRAFD1-205ENST00000548277 PRSS57Q6UWY2 283 aa10.77□□□□□ -0.69
TRAFD1-205ENST00000548277 PLEKHM3Q6ZWE6 761 aa10.77□□□□□ -0.69
TRAFD1-205ENST00000548277 FNDC9Q8TBE3 224 aa10.77□□□□□ -0.69
TRAFD1-205ENST00000548277 DCAKDQ8WVC6 231 aa10.77□□□□□ -0.69
TRAFD1-205ENST00000548277 SLC35A4Q96G79 324 aa10.77□□□□□ -0.69
TRAFD1-205ENST00000548277 RTN4RQ9BZR6 473 aa10.77□□□□□ -0.69
TRAFD1-205ENST00000548277 ELOVL5Q9NYP7 299 aa10.77□□□□□ -0.69
TRAFD1-205ENST00000548277 SENP1Q9P0U3 644 aa10.77□□□□□ -0.69
TRAFD1-205ENST00000548277 SNX6Q9UNH7 406 aa10.77□□□□□ -0.69
TRAFD1-205ENST00000548277 PROCRQ9UNN8 238 aa10.77□□□□□ -0.69
TRAFD1-205ENST00000548277 MRPS18CQ9Y3D5 142 aaKnown RBP10.77□□□□□ -0.69
TRAFD1-205ENST00000548277 HIVEP2P31629 2446 aa10.77□□□□□ -0.69
TRAFD1-205ENST00000548277 TLN2Q9Y4G6 2542 aa10.76□□□□□ -0.69
TRAFD1-205ENST00000548277 GNG14A0A1W2PPG7 69 aa10.76□□□□□ -0.69
TRAFD1-205ENST00000548277 TRIM49D1C9J1S8 452 aa10.76□□□□□ -0.69
TRAFD1-205ENST00000548277 STX16-NPEPL1H3BU86 382 aa10.76□□□□□ -0.69
TRAFD1-205ENST00000548277 STX16O14662 325 aa10.76□□□□□ -0.69
TRAFD1-205ENST00000548277 ABCB7O75027 752 aa10.76□□□□□ -0.69
TRAFD1-205ENST00000548277 BCAS2O75934 225 aaPredicted RBP10.76□□□□□ -0.69
TRAFD1-205ENST00000548277 CGAP01215 116 aa10.76□□□□□ -0.69
TRAFD1-205ENST00000548277 CRHP06850 196 aa10.76□□□□□ -0.69
TRAFD1-205ENST00000548277 COL6A2P12110 1019 aa10.76□□□□□ -0.69
TRAFD1-205ENST00000548277 LOXP28300 417 aaPredicted RBP10.76□□□□□ -0.69
TRAFD1-205ENST00000548277 PNLIPRP2P54317 469 aa10.76□□□□□ -0.69
TRAFD1-205ENST00000548277 GAS1P54826 345 aa10.76□□□□□ -0.69
TRAFD1-205ENST00000548277 BCL2A1Q16548 175 aa10.76□□□□□ -0.69
TRAFD1-205ENST00000548277 TSNAXIP1Q2TAA8 658 aa10.76□□□□□ -0.69
TRAFD1-205ENST00000548277 GLE1Q53GS7 698 aaKnown RBP10.76□□□□□ -0.69
TRAFD1-205ENST00000548277 LGSNQ5TDP6 509 aa10.76□□□□□ -0.69
TRAFD1-205ENST00000548277 MARCH3Q86UD3 253 aa10.76□□□□□ -0.69
TRAFD1-205ENST00000548277 WFDC8Q8IUA0 241 aa10.76□□□□□ -0.69
TRAFD1-205ENST00000548277 CEP112Q8N8E3 955 aa10.76□□□□□ -0.69
TRAFD1-205ENST00000548277 CDYL2Q8N8U2 506 aa10.76□□□□□ -0.69
TRAFD1-205ENST00000548277 OR2M3Q8NG83 312 aa10.76□□□□□ -0.69
TRAFD1-205ENST00000548277 OR7G2Q8NG99 324 aa10.76□□□□□ -0.69
TRAFD1-205ENST00000548277 CDC26Q8NHZ8 85 aa10.76□□□□□ -0.69
TRAFD1-205ENST00000548277 DUSP19Q8WTR2 217 aa10.76□□□□□ -0.69
TRAFD1-205ENST00000548277 MTBPQ96DY7 904 aa10.76□□□□□ -0.69
TRAFD1-205ENST00000548277 DTNBP1Q96EV8 351 aa10.76□□□□□ -0.69
TRAFD1-205ENST00000548277 MRPL57Q9BQC6 102 aaKnown RBP10.76□□□□□ -0.69
TRAFD1-205ENST00000548277 EBPLQ9BY08 206 aa10.76□□□□□ -0.69
TRAFD1-205ENST00000548277 PRRG4Q9BZD6 226 aa10.76□□□□□ -0.69
TRAFD1-205ENST00000548277 NMRK1Q9NWW6 199 aa10.76□□□□□ -0.69
TRAFD1-205ENST00000548277 VPS29Q9UBQ0 182 aa10.76□□□□□ -0.69
TRAFD1-205ENST00000548277 ZNF225Q9UK10 706 aa10.76□□□□□ -0.69
TRAFD1-205ENST00000548277 TMCO1Q9UM00 188 aa10.76□□□□□ -0.69
TRAFD1-205ENST00000548277 ALPK2Q86TB3 2170 aa10.75□□□□□ -0.69
TRAFD1-205ENST00000548277 A0A087WUV0 522 aaPredicted RBP10.75□□□□□ -0.69
TRAFD1-205ENST00000548277 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.75□□□□□ -0.69
TRAFD1-205ENST00000548277 OR2M5A3KFT3 312 aa10.75□□□□□ -0.69
TRAFD1-205ENST00000548277 EMC8O43402 210 aa10.75□□□□□ -0.69
TRAFD1-205ENST00000548277 PCDH7O60245 1069 aa10.75□□□□□ -0.69
TRAFD1-205ENST00000548277 AQP8O94778 261 aa10.75□□□□□ -0.69
TRAFD1-205ENST00000548277 OTCP00480 354 aa10.75□□□□□ -0.69
TRAFD1-205ENST00000548277 EVI2BP34910 448 aa10.75□□□□□ -0.69
TRAFD1-205ENST00000548277 EEFSECP57772 596 aaKnown RBP10.75□□□□□ -0.69
TRAFD1-205ENST00000548277 RAE1P78406 368 aaKnown RBP10.75□□□□□ -0.69
TRAFD1-205ENST00000548277 ZNF155Q12901 538 aaPredicted RBP10.75□□□□□ -0.69
TRAFD1-205ENST00000548277 TNK1Q13470 666 aa10.75□□□□□ -0.69
TRAFD1-205ENST00000548277 PRSS53Q2L4Q9 553 aa10.75□□□□□ -0.69
TRAFD1-205ENST00000548277 GGTA1PQ4G0N0 100 aa10.75□□□□□ -0.69
TRAFD1-205ENST00000548277 C20orf204Q6ZNR8 217 aa10.75□□□□□ -0.69
TRAFD1-205ENST00000548277 CXXC5Q7LFL8 322 aaKnown RBP10.75□□□□□ -0.69
TRAFD1-205ENST00000548277 ZNF675Q8TD23 568 aa10.75□□□□□ -0.69
TRAFD1-205ENST00000548277 ZNF483Q8TF39 744 aaPredicted RBP10.75□□□□□ -0.69
TRAFD1-205ENST00000548277 C16orf78Q8WTQ4 265 aa10.75□□□□□ -0.69
TRAFD1-205ENST00000548277 TMEM171Q8WVE6 324 aa10.75□□□□□ -0.69
TRAFD1-205ENST00000548277 APIPQ96GX9 242 aa10.75□□□□□ -0.69
TRAFD1-205ENST00000548277 VSTM2LQ96N03 204 aa10.75□□□□□ -0.69
TRAFD1-205ENST00000548277 BTBD9Q96Q07 612 aa10.75□□□□□ -0.69
TRAFD1-205ENST00000548277 BBS4Q96RK4 519 aa10.75□□□□□ -0.69
TRAFD1-205ENST00000548277 BRF2Q9HAW0 419 aa10.75□□□□□ -0.69
TRAFD1-205ENST00000548277 GIMAP4Q9NUV9 329 aa10.75□□□□□ -0.69
TRAFD1-205ENST00000548277 ZNF180Q9UJW8 692 aa10.75□□□□□ -0.69
TRAFD1-205ENST00000548277 NUP214P35658 2090 aaPredicted RBP10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms