RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 HMGN2P05204 90 aaKnown RBP17.11■□□□□ 0.33
PRPF40B-206ENST00000547764 ELAVL4P26378 380 aaKnown RBP17.11■□□□□ 0.33
PRPF40B-206ENST00000547764 KIR3DL1P43629 444 aa17.11■□□□□ 0.33
PRPF40B-206ENST00000547764 RFX3P48380 749 aa17.11■□□□□ 0.33
PRPF40B-206ENST00000547764 PRIM2P49643 509 aa17.11■□□□□ 0.33
PRPF40B-206ENST00000547764 CLNS1AP54105 237 aaKnown RBP17.11■□□□□ 0.33
PRPF40B-206ENST00000547764 UFM1P61960 85 aa17.11■□□□□ 0.33
PRPF40B-206ENST00000547764 PHC1P78364 1004 aa17.11■□□□□ 0.33
PRPF40B-206ENST00000547764 DUSP5Q16690 384 aa17.11■□□□□ 0.33
PRPF40B-206ENST00000547764 SPDYE7PQ495Y7 208 aa17.11■□□□□ 0.33
PRPF40B-206ENST00000547764 EXOSC6Q5RKV6 272 aaKnown RBP17.11■□□□□ 0.33
PRPF40B-206ENST00000547764 ZCCHC12Q6PEW1 402 aa17.11■□□□□ 0.33
PRPF40B-206ENST00000547764 CD163Q86VB7 1156 aa17.11■□□□□ 0.33
PRPF40B-206ENST00000547764 OR1J4Q8NGS1 313 aa17.11■□□□□ 0.33
PRPF40B-206ENST00000547764 ACTRT2Q8TDY3 377 aa17.11■□□□□ 0.33
PRPF40B-206ENST00000547764 RNF138Q8WVD3 245 aa17.11■□□□□ 0.33
PRPF40B-206ENST00000547764 RMND5BQ96G75 393 aaPredicted RBP17.11■□□□□ 0.33
PRPF40B-206ENST00000547764 PHF12Q96QT6 1004 aa17.11■□□□□ 0.33
PRPF40B-206ENST00000547764 OR52B2Q96RD2 323 aa17.11■□□□□ 0.33
PRPF40B-206ENST00000547764 ACBD3Q9H3P7 528 aa17.11■□□□□ 0.33
PRPF40B-206ENST00000547764 EXO5Q9H790 373 aa17.11■□□□□ 0.33
PRPF40B-206ENST00000547764 FLRT3Q9NZU0 649 aa17.11■□□□□ 0.33
PRPF40B-206ENST00000547764 MRTO4Q9UKD2 239 aaKnown RBP17.11■□□□□ 0.33
PRPF40B-206ENST00000547764 HRH3Q9Y5N1 445 aa17.11■□□□□ 0.33
PRPF40B-206ENST00000547764 SPTBN1Q01082 2364 aaKnown RBP17.1■□□□□ 0.33
PRPF40B-206ENST00000547764 AQP7O14520 342 aa17.1■□□□□ 0.33
PRPF40B-206ENST00000547764 HCN1O60741 890 aa17.1■□□□□ 0.33
PRPF40B-206ENST00000547764 DIAPH2O60879 1101 aa17.1■□□□□ 0.33
PRPF40B-206ENST00000547764 SCN2BO60939 215 aa17.1■□□□□ 0.33
PRPF40B-206ENST00000547764 TRAPPC6AO75865 159 aa17.1■□□□□ 0.33
PRPF40B-206ENST00000547764 KCNH1O95259 989 aa17.1■□□□□ 0.33
PRPF40B-206ENST00000547764 IGKV1D-16P01601 117 aa17.1■□□□□ 0.33
PRPF40B-206ENST00000547764 ALOX5P09917 674 aa17.1■□□□□ 0.33
PRPF40B-206ENST00000547764 PTPN6P29350 595 aa17.1■□□□□ 0.33
PRPF40B-206ENST00000547764 MAN2A2P49641 1150 aa17.1■□□□□ 0.33
PRPF40B-206ENST00000547764 PSMD4P55036 377 aaKnown RBP17.1■□□□□ 0.33
PRPF40B-206ENST00000547764 TP53BP2Q13625 1128 aa17.1■□□□□ 0.33
PRPF40B-206ENST00000547764 LASP1Q14847 261 aaKnown RBP17.1■□□□□ 0.33
PRPF40B-206ENST00000547764 SPANXN4Q5MJ08 99 aa17.1■□□□□ 0.33
PRPF40B-206ENST00000547764 EPGNQ6UW88 154 aa17.1■□□□□ 0.33
PRPF40B-206ENST00000547764 C3P1Q6ZMU1 363 aa17.1■□□□□ 0.33
PRPF40B-206ENST00000547764 WDSUB1Q8N9V3 476 aa17.1■□□□□ 0.33
PRPF40B-206ENST00000547764 OR56A1Q8NGH5 318 aa17.1■□□□□ 0.33
PRPF40B-206ENST00000547764 SFXN5Q8TD22 340 aa17.1■□□□□ 0.33
PRPF40B-206ENST00000547764 CKAP2Q8WWK9 683 aa17.1■□□□□ 0.33
PRPF40B-206ENST00000547764 OTUB1Q96FW1 271 aaPredicted RBP17.1■□□□□ 0.33
PRPF40B-206ENST00000547764 CCDC120Q96HB5 630 aa17.1■□□□□ 0.33
PRPF40B-206ENST00000547764 SLC6A15Q9H2J7 730 aa17.1■□□□□ 0.33
PRPF40B-206ENST00000547764 GPATCH2Q9NW75 528 aa17.1■□□□□ 0.33
PRPF40B-206ENST00000547764 TNFRSF10DQ9UBN6 386 aa17.1■□□□□ 0.33
PRPF40B-206ENST00000547764 SUCOQ9UBS9 1254 aaKnown RBP17.1■□□□□ 0.33
PRPF40B-206ENST00000547764 MEMO1Q9Y316 297 aa17.1■□□□□ 0.33
PRPF40B-206ENST00000547764 WIF1Q9Y5W5 379 aa17.1■□□□□ 0.33
PRPF40B-206ENST00000547764 ICE1Q9Y2F5 2266 aa17.1■□□□□ 0.33
PRPF40B-206ENST00000547764 FREM3P0C091 2139 aa17.09■□□□□ 0.33
PRPF40B-206ENST00000547764 PRSS51A0A1B0GVH4 220 aa17.09■□□□□ 0.33
PRPF40B-206ENST00000547764 OR14I1A6ND48 311 aa17.09■□□□□ 0.33
PRPF40B-206ENST00000547764 E9PBE3 544 aa17.09■□□□□ 0.33
PRPF40B-206ENST00000547764 FADS1O60427 444 aa17.09■□□□□ 0.33
PRPF40B-206ENST00000547764 HPNP05981 417 aa17.09■□□□□ 0.33
PRPF40B-206ENST00000547764 ESRRAP11474 423 aaPredicted RBP17.09■□□□□ 0.33
PRPF40B-206ENST00000547764 ENDOUP21128 410 aaKnown RBP17.09■□□□□ 0.33
PRPF40B-206ENST00000547764 IL12AP29459 219 aa17.09■□□□□ 0.33
PRPF40B-206ENST00000547764 EVI2BP34910 448 aa17.09■□□□□ 0.33
PRPF40B-206ENST00000547764 TRPC1P48995 793 aa17.09■□□□□ 0.33
PRPF40B-206ENST00000547764 GAS1P54826 345 aa17.09■□□□□ 0.33
PRPF40B-206ENST00000547764 DPY19L1Q2PZI1 675 aa17.09■□□□□ 0.33
PRPF40B-206ENST00000547764 FAM174BQ3ZCQ3 159 aa17.09■□□□□ 0.33
PRPF40B-206ENST00000547764 GXYLT1Q4G148 440 aa17.09■□□□□ 0.33
PRPF40B-206ENST00000547764 EMC4Q5J8M3 183 aa17.09■□□□□ 0.33
PRPF40B-206ENST00000547764 ANXA8L1Q5VT79 327 aa17.09■□□□□ 0.33
PRPF40B-206ENST00000547764 ANKRD46Q86W74 232 aa17.09■□□□□ 0.33
PRPF40B-206ENST00000547764 OR5AK3PQ8NH89 298 aa17.09■□□□□ 0.33
PRPF40B-206ENST00000547764 NEIL3Q8TAT5 605 aa17.09■□□□□ 0.33
PRPF40B-206ENST00000547764 JADE3Q92613 823 aa17.09■□□□□ 0.33
PRPF40B-206ENST00000547764 MOAP1Q96BY2 351 aa17.09■□□□□ 0.33
PRPF40B-206ENST00000547764 MARK4Q96L34 752 aa17.09■□□□□ 0.33
PRPF40B-206ENST00000547764 SPRR3Q9UBC9 169 aa17.09■□□□□ 0.33
PRPF40B-206ENST00000547764 C9JVG2 144 aa17.08■□□□□ 0.32
PRPF40B-206ENST00000547764 ADAM10O14672 748 aa17.08■□□□□ 0.32
PRPF40B-206ENST00000547764 BCKDKO14874 412 aa17.08■□□□□ 0.32
PRPF40B-206ENST00000547764 KCNK2O95069 426 aa17.08■□□□□ 0.32
PRPF40B-206ENST00000547764 UTS2O95399 124 aa17.08■□□□□ 0.32
PRPF40B-206ENST00000547764 IDO1P14902 403 aa17.08■□□□□ 0.32
PRPF40B-206ENST00000547764 S100A3P33764 101 aa17.08■□□□□ 0.32
PRPF40B-206ENST00000547764 SOAT1P35610 550 aa17.08■□□□□ 0.32
PRPF40B-206ENST00000547764 DGKQP52824 942 aa17.08■□□□□ 0.32
PRPF40B-206ENST00000547764 TOMM20Q15388 145 aa17.08■□□□□ 0.32
PRPF40B-206ENST00000547764 OR5M10Q6IEU7 315 aa17.08■□□□□ 0.32
PRPF40B-206ENST00000547764 CDC73Q6P1J9 531 aa17.08■□□□□ 0.32
PRPF40B-206ENST00000547764 MTFR2Q6P444 385 aa17.08■□□□□ 0.32
PRPF40B-206ENST00000547764 GALNT10Q86SR1 603 aa17.08■□□□□ 0.32
PRPF40B-206ENST00000547764 PLCZ1Q86YW0 608 aa17.08■□□□□ 0.32
PRPF40B-206ENST00000547764 CLEC4FQ8N1N0 589 aa17.08■□□□□ 0.32
PRPF40B-206ENST00000547764 COX18Q8N8Q8 333 aa17.08■□□□□ 0.32
PRPF40B-206ENST00000547764 VPS37AQ8NEZ2 397 aa17.08■□□□□ 0.32
PRPF40B-206ENST00000547764 OR4A15Q8NGL6 344 aa17.08■□□□□ 0.32
PRPF40B-206ENST00000547764 OR5M9Q8NGP3 310 aa17.08■□□□□ 0.32
PRPF40B-206ENST00000547764 FAM110BQ8TC76 370 aa17.08■□□□□ 0.32
PRPF40B-206ENST00000547764 SARAFQ96BY9 339 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms