RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 HORMAD2Q8N7B1 307 aa6.08□□□□□ -1.44
SNHG1-225ENST00000545920 ARIH2OSQ8N7S6 290 aa6.08□□□□□ -1.44
SNHG1-225ENST00000545920 TEX19Q8NA77 164 aa6.08□□□□□ -1.44
SNHG1-225ENST00000545920 ZNF485Q8NCK3 441 aa6.08□□□□□ -1.44
SNHG1-225ENST00000545920 TMIEQ8NEW7 156 aa6.08□□□□□ -1.44
SNHG1-225ENST00000545920 WDR48Q8TAF3 677 aa6.08□□□□□ -1.44
SNHG1-225ENST00000545920 PIGXQ8TBF5 258 aa6.08□□□□□ -1.44
SNHG1-225ENST00000545920 SLC7A13Q8TCU3 470 aa6.08□□□□□ -1.44
SNHG1-225ENST00000545920 SLC2A12Q8TD20 617 aa6.08□□□□□ -1.44
SNHG1-225ENST00000545920 PHYHIPQ92561 330 aa6.08□□□□□ -1.44
SNHG1-225ENST00000545920 AKAP1Q92667 903 aaKnown RBP eCLIP6.08□□□□□ -1.44
SNHG1-225ENST00000545920 CIDECQ96AQ7 238 aaPredicted RBP6.08□□□□□ -1.44
SNHG1-225ENST00000545920 TM4SF18Q96CE8 201 aa6.08□□□□□ -1.44
SNHG1-225ENST00000545920 C1GALT1C1Q96EU7 318 aa6.08□□□□□ -1.44
SNHG1-225ENST00000545920 RNFT2Q96EX2 444 aa6.08□□□□□ -1.44
SNHG1-225ENST00000545920 SLC35G5Q96KT7 338 aa6.08□□□□□ -1.44
SNHG1-225ENST00000545920 SLC6A18Q96N87 628 aa6.08□□□□□ -1.44
SNHG1-225ENST00000545920 LRFN5Q96NI6 719 aa6.08□□□□□ -1.44
SNHG1-225ENST00000545920 SLC22A12Q96S37 553 aa6.08□□□□□ -1.44
SNHG1-225ENST00000545920 TREX2Q9BQ50 279 aaPredicted RBP6.08□□□□□ -1.44
SNHG1-225ENST00000545920 TMEM43Q9BTV4 400 aa6.08□□□□□ -1.44
SNHG1-225ENST00000545920 VN1R3Q9BXE9 311 aa6.08□□□□□ -1.44
SNHG1-225ENST00000545920 ZNF717Q9BY31 904 aaPredicted RBP6.08□□□□□ -1.44
SNHG1-225ENST00000545920 ACTR6Q9GZN1 396 aa6.08□□□□□ -1.44
SNHG1-225ENST00000545920 GSX1Q9H4S2 264 aaPredicted RBP6.08□□□□□ -1.44
SNHG1-225ENST00000545920 RNF167Q9H6Y7 350 aa6.08□□□□□ -1.44
SNHG1-225ENST00000545920 CACYBPQ9HB71 228 aaKnown RBP6.08□□□□□ -1.44
SNHG1-225ENST00000545920 EMC7Q9NPA0 242 aa6.08□□□□□ -1.44
SNHG1-225ENST00000545920 TIGARQ9NQ88 270 aa6.08□□□□□ -1.44
SNHG1-225ENST00000545920 SIRT3Q9NTG7 399 aaPredicted RBP6.08□□□□□ -1.44
SNHG1-225ENST00000545920 MAN2C1Q9NTJ4 1040 aa6.08□□□□□ -1.44
SNHG1-225ENST00000545920 PAQR5Q9NXK6 330 aaPredicted RBP6.08□□□□□ -1.44
SNHG1-225ENST00000545920 KLHL28Q9NXS3 571 aa6.08□□□□□ -1.44
SNHG1-225ENST00000545920 TVP23BQ9NYZ1 205 aa6.08□□□□□ -1.44
SNHG1-225ENST00000545920 NLGN3Q9NZ94 848 aa6.08□□□□□ -1.44
SNHG1-225ENST00000545920 DNAJC27Q9NZQ0 273 aa6.08□□□□□ -1.44
SNHG1-225ENST00000545920 SLC13A4Q9UKG4 626 aa6.08□□□□□ -1.44
SNHG1-225ENST00000545920 FBXL21Q9UKT6 434 aa6.08□□□□□ -1.44
SNHG1-225ENST00000545920 ING4Q9UNL4 249 aa6.08□□□□□ -1.44
SNHG1-225ENST00000545920 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.08□□□□□ -1.44
SNHG1-225ENST00000545920 SPIN1Q9Y657 262 aaPredicted RBP6.08□□□□□ -1.44
SNHG1-225ENST00000545920 STON1Q9Y6Q2 735 aa6.08□□□□□ -1.44
SNHG1-225ENST00000545920 DOCK3Q8IZD9 2030 aa6.08□□□□□ -1.44
SNHG1-225ENST00000545920 DUXAA6NLW8 204 aa6.07□□□□□ -1.44
SNHG1-225ENST00000545920 OR2AG2A6NM03 316 aa6.07□□□□□ -1.44
SNHG1-225ENST00000545920 ANHXE9PGG2 379 aa6.07□□□□□ -1.44
SNHG1-225ENST00000545920 PLPP1O14494 284 aa6.07□□□□□ -1.44
SNHG1-225ENST00000545920 CASKO14936 926 aa6.07□□□□□ -1.44
SNHG1-225ENST00000545920 PLA2G10O15496 165 aa6.07□□□□□ -1.44
SNHG1-225ENST00000545920 ZNF780AO75290 641 aaPredicted RBP6.07□□□□□ -1.44
SNHG1-225ENST00000545920 LEFTY1O75610 366 aa6.07□□□□□ -1.44
SNHG1-225ENST00000545920 KLHL18O94889 574 aa6.07□□□□□ -1.44
SNHG1-225ENST00000545920 OR5F1O95221 314 aa6.07□□□□□ -1.44
SNHG1-225ENST00000545920 CD1AP06126 327 aa6.07□□□□□ -1.44
SNHG1-225ENST00000545920 FHP07954 510 aa6.07□□□□□ -1.44
SNHG1-225ENST00000545920 POU2F2P09086 479 aa6.07□□□□□ -1.44
SNHG1-225ENST00000545920 CHRNB1P11230 501 aa6.07□□□□□ -1.44
SNHG1-225ENST00000545920 POU2F1P14859 743 aa6.07□□□□□ -1.44
SNHG1-225ENST00000545920 TNNI3P19429 210 aa6.07□□□□□ -1.44
SNHG1-225ENST00000545920 TNFRSF1BP20333 461 aa6.07□□□□□ -1.44
SNHG1-225ENST00000545920 MMP11P24347 488 aa6.07□□□□□ -1.44
SNHG1-225ENST00000545920 HTR1FP30939 366 aa6.07□□□□□ -1.44
SNHG1-225ENST00000545920 PRKAR1BP31321 381 aa6.07□□□□□ -1.44
SNHG1-225ENST00000545920 RCVRNP35243 200 aa6.07□□□□□ -1.44
SNHG1-225ENST00000545920 ETV3P41162 512 aa6.07□□□□□ -1.44
SNHG1-225ENST00000545920 SLC1A3P43003 542 aa6.07□□□□□ -1.44
SNHG1-225ENST00000545920 KIR2DL3P43628 341 aa6.07□□□□□ -1.44
SNHG1-225ENST00000545920 PREPP48147 710 aa6.07□□□□□ -1.44
SNHG1-225ENST00000545920 RFX3P48380 749 aa6.07□□□□□ -1.44
SNHG1-225ENST00000545920 GATMP50440 423 aa6.07□□□□□ -1.44
SNHG1-225ENST00000545920 NKX2-5P52952 324 aaPredicted RBP6.07□□□□□ -1.44
SNHG1-225ENST00000545920 AP2S1P53680 142 aaPredicted RBP6.07□□□□□ -1.44
SNHG1-225ENST00000545920 ABATP80404 500 aa6.07□□□□□ -1.44
SNHG1-225ENST00000545920 PRR5P85299 388 aa6.07□□□□□ -1.44
SNHG1-225ENST00000545920 ZXDBP98169 803 aa6.07□□□□□ -1.44
SNHG1-225ENST00000545920 PITPNAQ00169 270 aa6.07□□□□□ -1.44
SNHG1-225ENST00000545920 SP3Q02447 781 aa6.07□□□□□ -1.44
SNHG1-225ENST00000545920 TGM3Q08188 693 aa6.07□□□□□ -1.44
SNHG1-225ENST00000545920 DECR1Q16698 335 aa6.07□□□□□ -1.44
SNHG1-225ENST00000545920 TATDN3Q17R31 274 aa6.07□□□□□ -1.44
SNHG1-225ENST00000545920 TMEM52BQ4KMG9 183 aa6.07□□□□□ -1.44
SNHG1-225ENST00000545920 EIPR1Q53HC9 387 aa6.07□□□□□ -1.44
SNHG1-225ENST00000545920 ANKRD39Q53RE8 183 aa6.07□□□□□ -1.44
SNHG1-225ENST00000545920 ZNF311Q5JNZ3 666 aa6.07□□□□□ -1.44
SNHG1-225ENST00000545920 C6orf183Q5T699 404 aa6.07□□□□□ -1.44
SNHG1-225ENST00000545920 HBMQ6B0K9 141 aa6.07□□□□□ -1.44
SNHG1-225ENST00000545920 C22orf42Q6IC83 251 aa6.07□□□□□ -1.44
SNHG1-225ENST00000545920 PODNL1Q6PEZ8 512 aa6.07□□□□□ -1.44
SNHG1-225ENST00000545920 DEF8Q6ZN54 512 aa6.07□□□□□ -1.44
SNHG1-225ENST00000545920 GAREM2Q75VX8 874 aa6.07□□□□□ -1.44
SNHG1-225ENST00000545920 RRM2BQ7LG56 351 aa6.07□□□□□ -1.44
SNHG1-225ENST00000545920 ZER1Q7Z7L7 766 aa6.07□□□□□ -1.44
SNHG1-225ENST00000545920 ADIPOR2Q86V24 386 aa6.07□□□□□ -1.44
SNHG1-225ENST00000545920 CMTM8Q8IZV2 173 aa6.07□□□□□ -1.44
SNHG1-225ENST00000545920 RNF175Q8N4F7 328 aa6.07□□□□□ -1.44
SNHG1-225ENST00000545920 MORN4Q8NDC4 146 aa6.07□□□□□ -1.44
SNHG1-225ENST00000545920 VANGL1Q8TAA9 524 aaPredicted RBP6.07□□□□□ -1.44
SNHG1-225ENST00000545920 DEDD2Q8WXF8 326 aa6.07□□□□□ -1.44
SNHG1-225ENST00000545920 SCAMP4Q969E2 229 aa6.07□□□□□ -1.44
SNHG1-225ENST00000545920 RAB7BQ96AH8 199 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms