RNA–Protein interactions for RNA: ENST00000545889.5

CLIP1-218, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 4,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-218ENST00000545889 LRIT3Q3SXY7 679 aa8.13□□□□□ -1.11
CLIP1-218ENST00000545889 SLC36A3Q495N2 470 aa8.13□□□□□ -1.11
CLIP1-218ENST00000545889 STEAP4Q687X5 459 aa8.13□□□□□ -1.11
CLIP1-218ENST00000545889 TMEM17Q86X19 198 aa8.13□□□□□ -1.11
CLIP1-218ENST00000545889 TIGD4Q8IY51 512 aa8.13□□□□□ -1.11
CLIP1-218ENST00000545889 PGAM4Q8N0Y7 254 aa8.13□□□□□ -1.11
CLIP1-218ENST00000545889 LGI4Q8N135 537 aa8.13□□□□□ -1.11
CLIP1-218ENST00000545889 ZNF565Q8N9K5 539 aa8.13□□□□□ -1.11
CLIP1-218ENST00000545889 OR10G2Q8NGC3 310 aa8.13□□□□□ -1.11
CLIP1-218ENST00000545889 OR13J1Q8NGT2 312 aa8.13□□□□□ -1.11
CLIP1-218ENST00000545889 OR6N2Q8NGY6 317 aa8.13□□□□□ -1.11
CLIP1-218ENST00000545889 CANT1Q8WVQ1 401 aa8.13□□□□□ -1.11
CLIP1-218ENST00000545889 BIRC7Q96CA5 298 aa8.13□□□□□ -1.11
CLIP1-218ENST00000545889 RSPRY1Q96DX4 576 aa8.13□□□□□ -1.11
CLIP1-218ENST00000545889 RBM24Q9BX46 236 aaKnown RBP8.13□□□□□ -1.11
CLIP1-218ENST00000545889 LRRC3Q9BY71 257 aa8.13□□□□□ -1.11
CLIP1-218ENST00000545889 POT1Q9NUX5 634 aa8.13□□□□□ -1.11
CLIP1-218ENST00000545889 SMOXQ9NWM0 555 aa8.13□□□□□ -1.11
CLIP1-218ENST00000545889 OBP2AQ9NY56 170 aa8.13□□□□□ -1.11
CLIP1-218ENST00000545889 BAIAP2Q9UQB8 552 aa8.13□□□□□ -1.11
CLIP1-218ENST00000545889 ANK1P16157 1881 aa8.13□□□□□ -1.11
CLIP1-218ENST00000545889 ZNF638Q14966 1978 aaKnown RBP8.13□□□□□ -1.11
CLIP1-218ENST00000545889 RGS10O43665 173 aa8.13□□□□□ -1.11
CLIP1-218ENST00000545889 SLC16A8O95907 504 aa8.13□□□□□ -1.11
CLIP1-218ENST00000545889 APOC1P02654 83 aa8.13□□□□□ -1.11
CLIP1-218ENST00000545889 CD79AP11912 226 aa8.13□□□□□ -1.11
CLIP1-218ENST00000545889 DRD2P14416 443 aa8.13□□□□□ -1.11
CLIP1-218ENST00000545889 ADRA1AP35348 466 aa8.13□□□□□ -1.11
CLIP1-218ENST00000545889 OCLNQ16625 522 aa8.13□□□□□ -1.11
CLIP1-218ENST00000545889 REP15Q6BDI9 236 aa8.13□□□□□ -1.11
CLIP1-218ENST00000545889 DHRS4L2Q6PKH6 230 aa8.13□□□□□ -1.11
CLIP1-218ENST00000545889 RAB11FIP2Q7L804 512 aa8.13□□□□□ -1.11
CLIP1-218ENST00000545889 ADIPOR2Q86V24 386 aa8.13□□□□□ -1.11
CLIP1-218ENST00000545889 RNF130Q86XS8 419 aa8.13□□□□□ -1.11
CLIP1-218ENST00000545889 ISG20Q96AZ6 181 aaKnown RBP8.13□□□□□ -1.11
CLIP1-218ENST00000545889 OR6C1Q96RD1 312 aa8.13□□□□□ -1.11
CLIP1-218ENST00000545889 WDR83Q9BRX9 315 aaKnown RBP8.13□□□□□ -1.11
CLIP1-218ENST00000545889 TSSK6Q9BXA6 273 aa8.13□□□□□ -1.11
CLIP1-218ENST00000545889 AKTIPQ9H8T0 292 aa8.13□□□□□ -1.11
CLIP1-218ENST00000545889 CPNE5Q9HCH3 593 aa8.13□□□□□ -1.11
CLIP1-218ENST00000545889 ABCB9Q9NP78 766 aa8.13□□□□□ -1.11
CLIP1-218ENST00000545889 PTBP2Q9UKA9 531 aaKnown RBP8.13□□□□□ -1.11
CLIP1-218ENST00000545889 OAZ3Q9UMX2 235 aa8.13□□□□□ -1.11
CLIP1-218ENST00000545889 TTC28Q96AY4 2481 aa8.12□□□□□ -1.11
CLIP1-218ENST00000545889 A0A0X1KG70 313 aa8.12□□□□□ -1.11
CLIP1-218ENST00000545889 C2CD4DB7Z1M9 353 aa8.12□□□□□ -1.11
CLIP1-218ENST00000545889 PRRG2O14669 202 aa8.12□□□□□ -1.11
CLIP1-218ENST00000545889 MOSPD3O75425 235 aa8.12□□□□□ -1.11
CLIP1-218ENST00000545889 PPM1BO75688 479 aa8.12□□□□□ -1.11
CLIP1-218ENST00000545889 OLFM2O95897 454 aa8.12□□□□□ -1.11
CLIP1-218ENST00000545889 EGFP01133 1207 aa8.12□□□□□ -1.11
CLIP1-218ENST00000545889 THRBP10828 461 aa8.12□□□□□ -1.11
CLIP1-218ENST00000545889 MYBPHQ13203 477 aa8.12□□□□□ -1.11
CLIP1-218ENST00000545889 BTN1A1Q13410 526 aa8.12□□□□□ -1.11
CLIP1-218ENST00000545889 SPANXN4Q5MJ08 99 aa8.12□□□□□ -1.11
CLIP1-218ENST00000545889 SYNPOQ8N3V7 929 aa8.12□□□□□ -1.11
CLIP1-218ENST00000545889 DTD2Q96FN9 168 aa8.12□□□□□ -1.11
CLIP1-218ENST00000545889 PGAM5Q96HS1 289 aa8.12□□□□□ -1.11
CLIP1-218ENST00000545889 TMEM41AQ96HV5 264 aa8.12□□□□□ -1.11
CLIP1-218ENST00000545889 METTL2AQ96IZ6 378 aaKnown RBP8.12□□□□□ -1.11
CLIP1-218ENST00000545889 SLC6A18Q96N87 628 aa8.12□□□□□ -1.11
CLIP1-218ENST00000545889 LRRC3BQ96PB8 259 aa8.12□□□□□ -1.11
CLIP1-218ENST00000545889 FN3KQ9H479 309 aa8.12□□□□□ -1.11
CLIP1-218ENST00000545889 SSU72Q9NP77 194 aaKnown RBP8.12□□□□□ -1.11
CLIP1-218ENST00000545889 NANSQ9NR45 359 aa8.12□□□□□ -1.11
CLIP1-218ENST00000545889 LAMP5Q9UJQ1 280 aa8.12□□□□□ -1.11
CLIP1-218ENST00000545889 ATXN7L1Q9ULK2 861 aaPredicted RBP8.12□□□□□ -1.11
CLIP1-218ENST00000545889 VDAC3Q9Y277 283 aa8.12□□□□□ -1.11
CLIP1-218ENST00000545889 GRIP1Q9Y3R0 1128 aa8.12□□□□□ -1.11
CLIP1-218ENST00000545889 INTS1Q8N201 2190 aaKnown RBP8.12□□□□□ -1.11
CLIP1-218ENST00000545889 METTL21EPA6NDL7 271 aa8.12□□□□□ -1.11
CLIP1-218ENST00000545889 H3BSH0 61 aa8.12□□□□□ -1.11
CLIP1-218ENST00000545889 JRKO75564 520 aa8.12□□□□□ -1.11
CLIP1-218ENST00000545889 H2BFMP0C1H6 154 aa8.12□□□□□ -1.11
CLIP1-218ENST00000545889 S1PR1P21453 382 aa8.12□□□□□ -1.11
CLIP1-218ENST00000545889 OR1D4P47884 311 aa8.12□□□□□ -1.11
CLIP1-218ENST00000545889 HSD17B7P56937 341 aa8.12□□□□□ -1.11
CLIP1-218ENST00000545889 SPEM2Q0P670 501 aa8.12□□□□□ -1.11
CLIP1-218ENST00000545889 TRAM2Q15035 370 aa8.12□□□□□ -1.11
CLIP1-218ENST00000545889 TPRG1LQ5T0D9 272 aa8.12□□□□□ -1.11
CLIP1-218ENST00000545889 SLC35F1Q5T1Q4 408 aa8.12□□□□□ -1.11
CLIP1-218ENST00000545889 ATAD3CQ5T2N8 411 aa8.12□□□□□ -1.11
CLIP1-218ENST00000545889 ADNP2Q6IQ32 1131 aa8.12□□□□□ -1.11
CLIP1-218ENST00000545889 LCTLQ6UWM7 567 aa8.12□□□□□ -1.11
CLIP1-218ENST00000545889 ZNF517Q6ZMY9 492 aaPredicted RBP8.12□□□□□ -1.11
CLIP1-218ENST00000545889 ZNF440Q8IYI8 595 aa8.12□□□□□ -1.11
CLIP1-218ENST00000545889 LSMEM2Q8N112 164 aa8.12□□□□□ -1.11
CLIP1-218ENST00000545889 TNFAIP8L1Q8WVP5 186 aa8.12□□□□□ -1.11
CLIP1-218ENST00000545889 NSMAFQ92636 917 aa8.12□□□□□ -1.11
CLIP1-218ENST00000545889 PITX2Q99697 317 aa8.12□□□□□ -1.11
CLIP1-218ENST00000545889 SMPD3Q9NY59 655 aaPredicted RBP8.12□□□□□ -1.11
CLIP1-218ENST00000545889 TNFRSF10DQ9UBN6 386 aa8.12□□□□□ -1.11
CLIP1-218ENST00000545889 MMP17Q9ULZ9 603 aa8.12□□□□□ -1.11
CLIP1-218ENST00000545889 ZNF879B4DU55 563 aa8.12□□□□□ -1.11
CLIP1-218ENST00000545889 C9P02748 559 aa8.12□□□□□ -1.11
CLIP1-218ENST00000545889 MMP2P08253 660 aa8.12□□□□□ -1.11
CLIP1-218ENST00000545889 DDCP20711 480 aa8.12□□□□□ -1.11
CLIP1-218ENST00000545889 CFL1P23528 166 aaKnown RBP8.12□□□□□ -1.11
CLIP1-218ENST00000545889 TIA1P31483 386 aaKnown RBP eCLIP8.12□□□□□ -1.11
CLIP1-218ENST00000545889 CPOXP36551 454 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms