RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 IRS1P35568 1242 aa5.45□□□□□ -1.54
VPS50-220ENST00000544910 CBX5P45973 191 aa5.45□□□□□ -1.54
VPS50-220ENST00000544910 ACTC1P68032 377 aa5.45□□□□□ -1.54
VPS50-220ENST00000544910 ACTA1P68133 377 aa5.45□□□□□ -1.54
VPS50-220ENST00000544910 SLC35A2P78381 396 aa5.45□□□□□ -1.54
VPS50-220ENST00000544910 MLLT11Q13015 90 aaPredicted RBP5.45□□□□□ -1.54
VPS50-220ENST00000544910 TAF13Q15543 124 aa5.45□□□□□ -1.54
VPS50-220ENST00000544910 PIP5KL1Q5T9C9 394 aa5.45□□□□□ -1.54
VPS50-220ENST00000544910 ASTLQ6HA08 431 aaPredicted RBP5.45□□□□□ -1.54
VPS50-220ENST00000544910 NRMQ8IXM6 262 aa5.45□□□□□ -1.54
VPS50-220ENST00000544910 GHDCQ8N2G8 530 aa5.45□□□□□ -1.54
VPS50-220ENST00000544910 SPERTQ8NA61 448 aa5.45□□□□□ -1.54
VPS50-220ENST00000544910 OR7G1Q8NGA0 311 aa5.45□□□□□ -1.54
VPS50-220ENST00000544910 RHOXF1Q8NHV9 184 aa5.45□□□□□ -1.54
VPS50-220ENST00000544910 NXPE3Q969Y0 559 aa5.45□□□□□ -1.54
VPS50-220ENST00000544910 HS6ST2Q96MM7 605 aa5.45□□□□□ -1.54
VPS50-220ENST00000544910 PRSS16Q9NQE7 514 aa5.45□□□□□ -1.54
VPS50-220ENST00000544910 PNO1Q9NRX1 252 aaKnown RBP5.45□□□□□ -1.54
VPS50-220ENST00000544910 GNG8Q9UK08 70 aa5.45□□□□□ -1.54
VPS50-220ENST00000544910 CSO75390 466 aaKnown RBP5.45□□□□□ -1.54
VPS50-220ENST00000544910 PTHP01270 115 aa5.45□□□□□ -1.54
VPS50-220ENST00000544910 SCG5P05408 212 aa5.45□□□□□ -1.54
VPS50-220ENST00000544910 AHRP35869 848 aa5.45□□□□□ -1.54
VPS50-220ENST00000544910 GCGRP47871 477 aa5.45□□□□□ -1.54
VPS50-220ENST00000544910 VSX2P58304 361 aaPredicted RBP5.45□□□□□ -1.54
VPS50-220ENST00000544910 RAE1P78406 368 aaKnown RBP5.45□□□□□ -1.54
VPS50-220ENST00000544910 TEKQ02763 1124 aa5.45□□□□□ -1.54
VPS50-220ENST00000544910 DPTQ07507 201 aa5.45□□□□□ -1.54
VPS50-220ENST00000544910 SLC14A1Q13336 389 aa5.45□□□□□ -1.54
VPS50-220ENST00000544910 RAB30Q15771 203 aa5.45□□□□□ -1.54
VPS50-220ENST00000544910 SYPL1Q16563 259 aa5.45□□□□□ -1.54
VPS50-220ENST00000544910 DEFB134Q4QY38 66 aa5.45□□□□□ -1.54
VPS50-220ENST00000544910 DESI1Q6ICB0 168 aa5.45□□□□□ -1.54
VPS50-220ENST00000544910 FAM122CQ6P4D5 195 aa5.45□□□□□ -1.54
VPS50-220ENST00000544910 ZNF550Q7Z398 422 aa5.45□□□□□ -1.54
VPS50-220ENST00000544910 CAMKMTQ7Z624 323 aa5.45□□□□□ -1.54
VPS50-220ENST00000544910 TMEM150AQ86TG1 271 aa5.45□□□□□ -1.54
VPS50-220ENST00000544910 KLBQ86Z14 1044 aa5.45□□□□□ -1.54
VPS50-220ENST00000544910 THAP6Q8TBB0 222 aa5.45□□□□□ -1.54
VPS50-220ENST00000544910 RPL3LQ92901 407 aaKnown RBP5.45□□□□□ -1.54
VPS50-220ENST00000544910 G6PC3Q9BUM1 346 aa5.45□□□□□ -1.54
VPS50-220ENST00000544910 GON7Q9BXV9 100 aa5.45□□□□□ -1.54
VPS50-220ENST00000544910 MKRN2Q9H000 416 aaKnown RBP5.45□□□□□ -1.54
VPS50-220ENST00000544910 NT5DC2Q9H857 520 aa5.45□□□□□ -1.54
VPS50-220ENST00000544910 TEX10Q9NXF1 929 aaPredicted RBP5.45□□□□□ -1.54
VPS50-220ENST00000544910 CNIH4Q9P003 139 aa5.45□□□□□ -1.54
VPS50-220ENST00000544910 ZNF69Q9UC07 566 aa5.45□□□□□ -1.54
VPS50-220ENST00000544910 POLR1DQ9Y2S0 133 aa5.45□□□□□ -1.54
VPS50-220ENST00000544910 FKBP7Q9Y680 259 aa5.45□□□□□ -1.54
VPS50-220ENST00000544910 ZNF860A6NHJ4 632 aa5.45□□□□□ -1.54
VPS50-220ENST00000544910 GRXCR1A8MXD5 290 aa5.45□□□□□ -1.54
VPS50-220ENST00000544910 PRODHO43272 600 aa5.45□□□□□ -1.54
VPS50-220ENST00000544910 PCDHGA12O60330 932 aa5.45□□□□□ -1.54
VPS50-220ENST00000544910 TACSTD2P09758 323 aa5.45□□□□□ -1.54
VPS50-220ENST00000544910 ALAS2P22557 587 aa5.45□□□□□ -1.54
VPS50-220ENST00000544910 CCR2P41597 374 aa5.45□□□□□ -1.54
VPS50-220ENST00000544910 MAP2K3P46734 347 aa5.45□□□□□ -1.54
VPS50-220ENST00000544910 TSPAN5P62079 268 aa5.45□□□□□ -1.54
VPS50-220ENST00000544910 TCTN1Q2MV58 587 aa5.45□□□□□ -1.54
VPS50-220ENST00000544910 C6orf132Q5T0Z8 1188 aa5.45□□□□□ -1.54
VPS50-220ENST00000544910 SLC35F1Q5T1Q4 408 aa5.45□□□□□ -1.54
VPS50-220ENST00000544910 MLIPQ5VWP3 458 aa5.45□□□□□ -1.54
VPS50-220ENST00000544910 FRMPD2BQ6IN97 320 aa5.45□□□□□ -1.54
VPS50-220ENST00000544910 POMZP3Q6PJE2 187 aa5.45□□□□□ -1.54
VPS50-220ENST00000544910 ASB18Q6ZVZ8 466 aa5.45□□□□□ -1.54
VPS50-220ENST00000544910 SHFQ7M4L6 423 aa5.45□□□□□ -1.54
VPS50-220ENST00000544910 SETD6Q8TBK2 473 aa5.45□□□□□ -1.54
VPS50-220ENST00000544910 ADAMTS19Q8TE59 1207 aa5.45□□□□□ -1.54
VPS50-220ENST00000544910 SGPP1Q9BX95 441 aa5.45□□□□□ -1.54
VPS50-220ENST00000544910 PPA2Q9H2U2 334 aa5.45□□□□□ -1.54
VPS50-220ENST00000544910 NUDT15Q9NV35 164 aa5.45□□□□□ -1.54
VPS50-220ENST00000544910 SLC39A1Q9NY26 324 aa5.45□□□□□ -1.54
VPS50-220ENST00000544910 SCML1Q9UN30 329 aa5.45□□□□□ -1.54
VPS50-220ENST00000544910 NYNRINQ9P2P1 1898 aaKnown RBP5.45□□□□□ -1.54
VPS50-220ENST00000544910 PRSS38A1L453 326 aa5.45□□□□□ -1.54
VPS50-220ENST00000544910 TRAPPC13A5PLN9 417 aa5.45□□□□□ -1.54
VPS50-220ENST00000544910 RHPN2P1A8MT19 583 aa5.45□□□□□ -1.54
VPS50-220ENST00000544910 ETHE1O95571 254 aa5.45□□□□□ -1.54
VPS50-220ENST00000544910 AIFM1O95831 613 aa5.45□□□□□ -1.54
VPS50-220ENST00000544910 HMGN2P05204 90 aaKnown RBP5.45□□□□□ -1.54
VPS50-220ENST00000544910 ACP2P11117 423 aa5.45□□□□□ -1.54
VPS50-220ENST00000544910 NTSR1P30989 418 aa5.45□□□□□ -1.54
VPS50-220ENST00000544910 CTBP2P56545 445 aa5.45□□□□□ -1.54
VPS50-220ENST00000544910 KIAA0040Q15053 153 aa5.45□□□□□ -1.54
VPS50-220ENST00000544910 UAP1L1Q3KQV9 507 aa5.45□□□□□ -1.54
VPS50-220ENST00000544910 AMZ1Q400G9 498 aa5.45□□□□□ -1.54
VPS50-220ENST00000544910 BAIAP2L2Q6UXY1 529 aa5.45□□□□□ -1.54
VPS50-220ENST00000544910 VRK2Q86Y07 508 aa5.45□□□□□ -1.54
VPS50-220ENST00000544910 ZNF248Q8NDW4 579 aa5.45□□□□□ -1.54
VPS50-220ENST00000544910 PROKR2Q8NFJ6 384 aa5.45□□□□□ -1.54
VPS50-220ENST00000544910 OR6K6Q8NGW6 343 aa5.45□□□□□ -1.54
VPS50-220ENST00000544910 OR5J2Q8NH18 312 aa5.45□□□□□ -1.54
VPS50-220ENST00000544910 CDS1Q92903 461 aa5.45□□□□□ -1.54
VPS50-220ENST00000544910 SPACA7Q96KW9 195 aa5.45□□□□□ -1.54
VPS50-220ENST00000544910 ZSWIM3Q96MP5 696 aa5.45□□□□□ -1.54
VPS50-220ENST00000544910 ZFP3Q96NJ6 502 aa5.45□□□□□ -1.54
VPS50-220ENST00000544910 SCGB3A2Q96PL1 93 aa5.45□□□□□ -1.54
VPS50-220ENST00000544910 GAL3ST4Q96RP7 486 aa5.45□□□□□ -1.54
VPS50-220ENST00000544910 CDCA3Q99618 268 aaPredicted RBP5.45□□□□□ -1.54
VPS50-220ENST00000544910 MACROD1Q9BQ69 325 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms