RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 KIAA0513O60268 411 aa28.2■■■□□ 2.1
CCM2-219ENST00000544363 ZNF23P17027 643 aa28.2■■■□□ 2.1
CCM2-219ENST00000544363 GPR143P51810 404 aa28.2■■■□□ 2.1
CCM2-219ENST00000544363 CPEB2Q7Z5Q1 589 aaKnown RBP28.2■■■□□ 2.1
CCM2-219ENST00000544363 VRK2Q86Y07 508 aa28.2■■■□□ 2.1
CCM2-219ENST00000544363 ZSCAN1Q8NBB4 408 aa28.2■■■□□ 2.1
CCM2-219ENST00000544363 DNAJC9Q8WXX5 260 aa28.2■■■□□ 2.1
CCM2-219ENST00000544363 ZNF300Q96RE9 604 aaPredicted RBP28.2■■■□□ 2.1
CCM2-219ENST00000544363 ZNF347Q96SE7 839 aa28.2■■■□□ 2.1
CCM2-219ENST00000544363 SLC29A1Q99808 456 aa28.2■■■□□ 2.1
CCM2-219ENST00000544363 MESP1Q9BRJ9 268 aa28.2■■■□□ 2.1
CCM2-219ENST00000544363 AMBRA1Q9C0C7 1298 aa28.2■■■□□ 2.1
CCM2-219ENST00000544363 CACYBPQ9HB71 228 aaKnown RBP28.2■■■□□ 2.1
CCM2-219ENST00000544363 CBLCQ9ULV8 474 aa28.2■■■□□ 2.1
CCM2-219ENST00000544363 OR6C76A6NM76 312 aa28.19■■■□□ 2.1
CCM2-219ENST00000544363 DPM1O60762 260 aa28.19■■■□□ 2.1
CCM2-219ENST00000544363 LGI1O95970 557 aa28.19■■■□□ 2.1
CCM2-219ENST00000544363 IFNW1P05000 195 aa28.19■■■□□ 2.1
CCM2-219ENST00000544363 CCNYL3P0C7X3 344 aa28.19■■■□□ 2.1
CCM2-219ENST00000544363 PRKAR1BP31321 381 aa28.19■■■□□ 2.1
CCM2-219ENST00000544363 PIGAP37287 484 aa28.19■■■□□ 2.1
CCM2-219ENST00000544363 PPP4R4Q6NUP7 873 aa28.19■■■□□ 2.1
CCM2-219ENST00000544363 DHRS4L2Q6PKH6 230 aa28.19■■■□□ 2.1
CCM2-219ENST00000544363 CACTIN-AS1Q8N1I8 211 aa28.19■■■□□ 2.1
CCM2-219ENST00000544363 OR10H1Q9Y4A9 318 aa28.19■■■□□ 2.1
CCM2-219ENST00000544363 ENPP4Q9Y6X5 453 aa28.19■■■□□ 2.1
CCM2-219ENST00000544363 AGAP5A6NIR3 686 aa28.18■■■□□ 2.1
CCM2-219ENST00000544363 PDLIM1O00151 329 aa28.18■■■□□ 2.1
CCM2-219ENST00000544363 KLF7O75840 302 aaPredicted RBP28.18■■■□□ 2.1
CCM2-219ENST00000544363 CD63P08962 238 aa28.18■■■□□ 2.1
CCM2-219ENST00000544363 AQP4P55087 323 aa28.18■■■□□ 2.1
CCM2-219ENST00000544363 NNATQ16517 81 aa28.18■■■□□ 2.1
CCM2-219ENST00000544363 TIPARPQ7Z3E1 657 aaKnown RBP28.18■■■□□ 2.1
CCM2-219ENST00000544363 COMTD1Q86VU5 262 aa28.18■■■□□ 2.1
CCM2-219ENST00000544363 CARM1Q86X55 608 aa28.18■■■□□ 2.1
CCM2-219ENST00000544363 C9orf40Q8IXQ3 194 aa28.18■■■□□ 2.1
CCM2-219ENST00000544363 GALNT4Q8N4A0 578 aa28.18■■■□□ 2.1
CCM2-219ENST00000544363 NFAM1Q8NET5 270 aaPredicted RBP28.18■■■□□ 2.1
CCM2-219ENST00000544363 ADIPOR1Q96A54 375 aa28.18■■■□□ 2.1
CCM2-219ENST00000544363 PPIEQ9UNP9 301 aaKnown RBP28.18■■■□□ 2.1
CCM2-219ENST00000544363 ZNF232Q9UNY5 417 aa28.18■■■□□ 2.1
CCM2-219ENST00000544363 C15orf41Q9Y2V0 281 aa28.18■■■□□ 2.1
CCM2-219ENST00000544363 PTRH2Q9Y3E5 179 aaKnown RBP28.18■■■□□ 2.1
CCM2-219ENST00000544363 AK5Q9Y6K8 562 aa28.18■■■□□ 2.1
CCM2-219ENST00000544363 SYT5O00445 386 aa28.18■■■□□ 2.1
CCM2-219ENST00000544363 SOCS2O14508 198 aa28.18■■■□□ 2.1
CCM2-219ENST00000544363 EPPINO95925 133 aa28.18■■■□□ 2.1
CCM2-219ENST00000544363 IGKV1D-16P01601 117 aa28.18■■■□□ 2.1
CCM2-219ENST00000544363 DRD5P21918 477 aa28.18■■■□□ 2.1
CCM2-219ENST00000544363 RPS4Y1P22090 263 aaKnown RBP28.18■■■□□ 2.1
CCM2-219ENST00000544363 IST1P53990 364 aa28.18■■■□□ 2.1
CCM2-219ENST00000544363 DCAF7P61962 342 aa28.18■■■□□ 2.1
CCM2-219ENST00000544363 TARDBPQ13148 414 aaKnown RBP eCLIP28.18■■■□□ 2.1
CCM2-219ENST00000544363 EBPQ15125 230 aaKnown RBP28.18■■■□□ 2.1
CCM2-219ENST00000544363 PAPD4Q6PIY7 484 aaKnown RBP28.18■■■□□ 2.1
CCM2-219ENST00000544363 CBR4Q8N4T8 237 aa28.18■■■□□ 2.1
CCM2-219ENST00000544363 B3GNT7Q8NFL0 401 aa28.18■■■□□ 2.1
CCM2-219ENST00000544363 LCORQ96JN0 433 aaPredicted RBP28.18■■■□□ 2.1
CCM2-219ENST00000544363 LPAR4Q99677 370 aa28.18■■■□□ 2.1
CCM2-219ENST00000544363 WDR77Q9BQA1 342 aaPredicted RBP28.18■■■□□ 2.1
CCM2-219ENST00000544363 C8orf4Q9NR00 106 aa28.18■■■□□ 2.1
CCM2-219ENST00000544363 VNN3Q9NY84 501 aa28.18■■■□□ 2.1
CCM2-219ENST00000544363 ZNF443Q9Y2A4 671 aaPredicted RBP28.18■■■□□ 2.1
CCM2-219ENST00000544363 C2orf92A0A1B0GVN3 265 aa28.17■■■□□ 2.1
CCM2-219ENST00000544363 TM4SF5O14894 197 aa28.17■■■□□ 2.1
CCM2-219ENST00000544363 THBS1P07996 1170 aa28.17■■■□□ 2.1
CCM2-219ENST00000544363 ATP6V1C1P21283 382 aa28.17■■■□□ 2.1
CCM2-219ENST00000544363 LARS2Q15031 903 aaKnown RBP28.17■■■□□ 2.1
CCM2-219ENST00000544363 SLC29A4Q7RTT9 530 aa28.17■■■□□ 2.1
CCM2-219ENST00000544363 ZAR1Q86SH2 424 aa28.17■■■□□ 2.1
CCM2-219ENST00000544363 SVOPLQ8N434 492 aa28.17■■■□□ 2.1
CCM2-219ENST00000544363 PACRGLQ8N7B6 248 aa28.17■■■□□ 2.1
CCM2-219ENST00000544363 BCORP1Q8N888 145 aa28.17■■■□□ 2.1
CCM2-219ENST00000544363 OR2Y1Q8NGV0 311 aa28.17■■■□□ 2.1
CCM2-219ENST00000544363 OR5K1Q8NHB7 308 aa28.17■■■□□ 2.1
CCM2-219ENST00000544363 G6PC3Q9BUM1 346 aa28.17■■■□□ 2.1
CCM2-219ENST00000544363 SEMA4CQ9C0C4 833 aa28.17■■■□□ 2.1
CCM2-219ENST00000544363 FOXJ2Q9P0K8 574 aa28.17■■■□□ 2.1
CCM2-219ENST00000544363 SLC9A8Q9Y2E8 581 aa28.17■■■□□ 2.1
CCM2-219ENST00000544363 FRG2CA6NGY1 282 aa28.16■■■□□ 2.1
CCM2-219ENST00000544363 E2F6O75461 281 aa28.16■■■□□ 2.1
CCM2-219ENST00000544363 DBIP07108 87 aaKnown RBP28.16■■■□□ 2.1
CCM2-219ENST00000544363 UMODP07911 640 aa28.16■■■□□ 2.1
CCM2-219ENST00000544363 IL7RP16871 459 aa28.16■■■□□ 2.1
CCM2-219ENST00000544363 RFX3P48380 749 aa28.16■■■□□ 2.1
CCM2-219ENST00000544363 FAM69BQ5VUD6 431 aa28.16■■■□□ 2.1
CCM2-219ENST00000544363 ZDHHC13Q8IUH4 622 aa28.16■■■□□ 2.1
CCM2-219ENST00000544363 OR4D11Q8NGI4 311 aa28.16■■■□□ 2.1
CCM2-219ENST00000544363 NXF5Q9H1B4 397 aaKnown RBP28.16■■■□□ 2.1
CCM2-219ENST00000544363 FAM32AQ9Y421 112 aaKnown RBP28.16■■■□□ 2.1
CCM2-219ENST00000544363 CHST2Q9Y4C5 530 aa28.16■■■□□ 2.1
CCM2-219ENST00000544363 G3V2T6 193 aa28.15■■■□□ 2.1
CCM2-219ENST00000544363 DNAJB5O75953 348 aa28.15■■■□□ 2.1
CCM2-219ENST00000544363 RASAL1O95294 804 aa28.15■■■□□ 2.1
CCM2-219ENST00000544363 RHCEP18577 417 aa28.15■■■□□ 2.1
CCM2-219ENST00000544363 DCTP40126 519 aa28.15■■■□□ 2.1
CCM2-219ENST00000544363 PPP1R8Q12972 351 aaKnown RBP28.15■■■□□ 2.1
CCM2-219ENST00000544363 MAPK14Q16539 360 aa28.15■■■□□ 2.1
CCM2-219ENST00000544363 NRF1Q16656 503 aa28.15■■■□□ 2.1
CCM2-219ENST00000544363 FLYWCH1Q4VC44 716 aa28.15■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms