RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 NKX3-2P78367 333 aa14.65□□□□□ -0.06
CHD4-210ENST00000544040 COQ5Q5HYK3 327 aa14.65□□□□□ -0.06
CHD4-210ENST00000544040 RAB41Q5JT25 222 aa14.65□□□□□ -0.06
CHD4-210ENST00000544040 GDPD1Q8N9F7 314 aa14.65□□□□□ -0.06
CHD4-210ENST00000544040 RHEBL1Q8TAI7 183 aa14.65□□□□□ -0.06
CHD4-210ENST00000544040 NT5C3BQ969T7 300 aa14.65□□□□□ -0.06
CHD4-210ENST00000544040 DDIT4LQ96D03 193 aa14.65□□□□□ -0.06
CHD4-210ENST00000544040 KCNJ16Q9NPI9 418 aa14.65□□□□□ -0.06
CHD4-210ENST00000544040 ACOT13Q9NPJ3 140 aa14.65□□□□□ -0.06
CHD4-210ENST00000544040 FAM86C1Q9NVL1 165 aa14.65□□□□□ -0.06
CHD4-210ENST00000544040 PLEKHJ1Q9NW61 149 aa14.65□□□□□ -0.06
CHD4-210ENST00000544040 NUBP2Q9Y5Y2 271 aa14.65□□□□□ -0.06
CHD4-210ENST00000544040 CSNK1G3Q9Y6M4 447 aa14.65□□□□□ -0.06
CHD4-210ENST00000544040 A8MXE2 369 aa14.65□□□□□ -0.06
CHD4-210ENST00000544040 NUDT21O43809 227 aaKnown RBP14.65□□□□□ -0.06
CHD4-210ENST00000544040 HPGDSO60760 199 aa14.65□□□□□ -0.06
CHD4-210ENST00000544040 LAMP1P11279 417 aa14.65□□□□□ -0.06
CHD4-210ENST00000544040 BMP4P12644 408 aa14.65□□□□□ -0.06
CHD4-210ENST00000544040 RORAP35398 523 aa14.65□□□□□ -0.06
CHD4-210ENST00000544040 RPS21P63220 83 aaKnown RBP14.65□□□□□ -0.06
CHD4-210ENST00000544040 BORAQ6PGQ7 559 aa14.65□□□□□ -0.06
CHD4-210ENST00000544040 ZNF761Q86XN6 746 aaPredicted RBP14.65□□□□□ -0.06
CHD4-210ENST00000544040 SGPP2Q8IWX5 399 aa14.65□□□□□ -0.06
CHD4-210ENST00000544040 OR4K5Q8NGD3 323 aa14.65□□□□□ -0.06
CHD4-210ENST00000544040 OR2T4Q8NH00 348 aa14.65□□□□□ -0.06
CHD4-210ENST00000544040 DIO2Q92813 273 aa14.65□□□□□ -0.06
CHD4-210ENST00000544040 IMP4Q96G21 291 aaKnown RBP14.65□□□□□ -0.06
CHD4-210ENST00000544040 APIPQ96GX9 242 aa14.65□□□□□ -0.06
CHD4-210ENST00000544040 HRH4Q9H3N8 390 aa14.65□□□□□ -0.06
CHD4-210ENST00000544040 ABRACLQ9P1F3 81 aa14.65□□□□□ -0.06
CHD4-210ENST00000544040 IGKV6D-41A0A0C4DH26 115 aa14.65□□□□□ -0.06
CHD4-210ENST00000544040 IGLON5A6NGN9 336 aa14.65□□□□□ -0.06
CHD4-210ENST00000544040 FGF18O76093 207 aa14.65□□□□□ -0.06
CHD4-210ENST00000544040 SCAPQ12770 1279 aa14.65□□□□□ -0.06
CHD4-210ENST00000544040 MICAQ29983 383 aa14.65□□□□□ -0.06
CHD4-210ENST00000544040 METTL11BQ5VVY1 283 aa14.65□□□□□ -0.06
CHD4-210ENST00000544040 NAGSQ8N159 534 aa14.65□□□□□ -0.06
CHD4-210ENST00000544040 OR5D16Q8NGK9 328 aa14.65□□□□□ -0.06
CHD4-210ENST00000544040 KIAA1143Q96AT1 154 aaPredicted RBP14.65□□□□□ -0.06
CHD4-210ENST00000544040 SIX4Q9UIU6 781 aa14.65□□□□□ -0.06
CHD4-210ENST00000544040 INSL6Q9Y581 213 aa14.65□□□□□ -0.06
CHD4-210ENST00000544040 LOC102723532A0A0G2JNH3 316 aa14.65□□□□□ -0.06
CHD4-210ENST00000544040 SULT1B1O43704 296 aa14.65□□□□□ -0.06
CHD4-210ENST00000544040 SOX9P48436 509 aa14.65□□□□□ -0.06
CHD4-210ENST00000544040 DAZLQ92904 295 aaKnown RBP14.65□□□□□ -0.06
CHD4-210ENST00000544040 MFFQ9GZY8 342 aa14.65□□□□□ -0.06
CHD4-210ENST00000544040 C11orf49Q9H6J7 331 aa14.65□□□□□ -0.06
CHD4-210ENST00000544040 FTSJ1Q9UET6 329 aa14.65□□□□□ -0.06
CHD4-210ENST00000544040 A6NCN8 305 aa14.64□□□□□ -0.07
CHD4-210ENST00000544040 ATG12O94817 140 aa14.64□□□□□ -0.07
CHD4-210ENST00000544040 TGM6O95932 706 aa14.64□□□□□ -0.07
CHD4-210ENST00000544040 CERS1P27544 350 aa14.64□□□□□ -0.07
CHD4-210ENST00000544040 CNKSR3Q6P9H4 555 aa14.64□□□□□ -0.07
CHD4-210ENST00000544040 TECPR1Q7Z6L1 1165 aa14.64□□□□□ -0.07
CHD4-210ENST00000544040 TSPYL5Q86VY4 417 aaPredicted RBP14.64□□□□□ -0.07
CHD4-210ENST00000544040 MS4A15Q8N5U1 240 aa14.64□□□□□ -0.07
CHD4-210ENST00000544040 ADAMTS19Q8TE59 1207 aa14.64□□□□□ -0.07
CHD4-210ENST00000544040 IRF7Q92985 503 aa14.64□□□□□ -0.07
CHD4-210ENST00000544040 PCYT1BQ9Y5K3 369 aaPredicted RBP14.64□□□□□ -0.07
CHD4-210ENST00000544040 RNGTTO60942 597 aaKnown RBP14.64□□□□□ -0.07
CHD4-210ENST00000544040 GAAP10253 952 aa14.64□□□□□ -0.07
CHD4-210ENST00000544040 OSMP13725 252 aa14.64□□□□□ -0.07
CHD4-210ENST00000544040 GBX1Q14549 363 aa14.64□□□□□ -0.07
CHD4-210ENST00000544040 USP53Q70EK8 1073 aa14.64□□□□□ -0.07
CHD4-210ENST00000544040 WDSUB1Q8N9V3 476 aa14.64□□□□□ -0.07
CHD4-210ENST00000544040 THAP7Q9BT49 309 aaPredicted RBP14.64□□□□□ -0.07
CHD4-210ENST00000544040 RBM24Q9BX46 236 aaKnown RBP14.64□□□□□ -0.07
CHD4-210ENST00000544040 GPN2Q9H9Y4 310 aaPredicted RBP14.64□□□□□ -0.07
CHD4-210ENST00000544040 MST1RQ04912 1400 aa14.64□□□□□ -0.07
CHD4-210ENST00000544040 F5H5K5 113 aa14.64□□□□□ -0.07
CHD4-210ENST00000544040 UBE2NP61088 152 aaKnown RBP14.64□□□□□ -0.07
CHD4-210ENST00000544040 RCAN2Q14206 197 aa14.64□□□□□ -0.07
CHD4-210ENST00000544040 PAPD5Q8NDF8 572 aaKnown RBP14.64□□□□□ -0.07
CHD4-210ENST00000544040 SDR9C7Q8NEX9 313 aa14.64□□□□□ -0.07
CHD4-210ENST00000544040 IL17RDQ8NFM7 739 aa14.64□□□□□ -0.07
CHD4-210ENST00000544040 GCDHQ92947 438 aaPredicted RBP14.64□□□□□ -0.07
CHD4-210ENST00000544040 PPP1R14DQ9NXH3 145 aa14.64□□□□□ -0.07
CHD4-210ENST00000544040 TMEM181Q9P2C4 612 aa14.64□□□□□ -0.07
CHD4-210ENST00000544040 B4GALT7Q9UBV7 327 aa14.64□□□□□ -0.07
CHD4-210ENST00000544040 NME4O00746 187 aa14.64□□□□□ -0.07
CHD4-210ENST00000544040 IL1RNP18510 177 aa14.64□□□□□ -0.07
CHD4-210ENST00000544040 RPS15AP62244 130 aaKnown RBP14.64□□□□□ -0.07
CHD4-210ENST00000544040 DEFB110Q30KQ9 67 aa14.64□□□□□ -0.07
CHD4-210ENST00000544040 UEVLDQ8IX04 471 aa14.64□□□□□ -0.07
CHD4-210ENST00000544040 FOXN4Q96NZ1 517 aa14.64□□□□□ -0.07
CHD4-210ENST00000544040 PDE7BQ9NP56 450 aa14.64□□□□□ -0.07
CHD4-210ENST00000544040 VSX1Q9NZR4 365 aaPredicted RBP14.64□□□□□ -0.07
CHD4-210ENST00000544040 DNAJC15Q9Y5T4 150 aa14.64□□□□□ -0.07
CHD4-210ENST00000544040 KDM4FA0A1W2PPD8 638 aa14.64□□□□□ -0.07
CHD4-210ENST00000544040 SENP5Q96HI0 755 aaPredicted RBP14.64□□□□□ -0.07
CHD4-210ENST00000544040 ATG4BQ9Y4P1 393 aa14.64□□□□□ -0.07
CHD4-210ENST00000544040 ERVK-16P61578 105 aa14.63□□□□□ -0.07
CHD4-210ENST00000544040 ACY1Q03154 408 aa14.63□□□□□ -0.07
CHD4-210ENST00000544040 GPRIN1Q7Z2K8 1008 aa14.63□□□□□ -0.07
CHD4-210ENST00000544040 MAMDC2Q7Z304 686 aaPredicted RBP14.63□□□□□ -0.07
CHD4-210ENST00000544040 CD163Q86VB7 1156 aa14.63□□□□□ -0.07
CHD4-210ENST00000544040 CPOQ8IVL8 374 aa14.63□□□□□ -0.07
CHD4-210ENST00000544040 MRPL41Q8IXM3 137 aaKnown RBP14.63□□□□□ -0.07
CHD4-210ENST00000544040 OR51Q1Q8NH59 317 aa14.63□□□□□ -0.07
CHD4-210ENST00000544040 OR51J1Q9H342 316 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms